RNA–Protein interactions for RNA: ENST00000399848.7

LDLRAD4-203, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-203ENST00000399848 FOXN1O15353 648 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 TBC1D12O60347 775 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 ITGA4P13612 1032 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 PPP2R1BP30154 601 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 CAMK2GQ13555 558 aaPredicted RBP13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 METTL5Q9NRN9 209 aaKnown RBP13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 HPS5Q9UPZ3 1129 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 MGAT4DA6NG13 374 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 ZNF862O60290 1169 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 HLA-DRAP01903 254 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 LRG1P02750 347 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 HMBSP08397 361 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 GPC1P35052 558 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 CPA2P48052 419 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 ARMC4Q5T2S8 1044 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 PRMT9Q6P2P2 845 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 ATP6V0D2Q8N8Y2 350 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 FAM49BQ9NUQ9 324 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 CYP39A1Q9NYL5 469 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 SNX13Q9Y5W8 968 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 PNMA8CA0A1B0GUJ8 204 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 STX7O15400 261 aaKnown RBP13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 FKBP6O75344 327 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 HSMCR30P0CW71 290 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 ODC1P11926 461 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 HNRNPH1P31943 449 aaKnown RBP13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 SLC22A9Q8IVM8 553 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 COPS7BQ9H9Q2 264 aaPredicted RBP13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 MBD2Q9UBB5 411 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 KLHL20Q9Y2M5 609 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 PCDHB12Q9Y5F1 795 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 STON1Q9Y6Q2 735 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 CEP152O94986 1710 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 FAM196BA6NMK8 535 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 SUPT7LO94864 414 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 HPGDP15428 266 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 FMR1Q06787 632 aaKnown RBP eCLIP13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 IKBIPQ70UQ0 350 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 C11orf74Q86VG3 221 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 MICALL2Q8IY33 904 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 RNFT2Q96EX2 444 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 BDH2Q9BUT1 245 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 THG1LQ9NWX6 298 aaKnown RBP13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 COMMD8Q9NX08 183 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 KLHL3Q9UH77 587 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 RAG1P15918 1043 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 PDK2Q15119 407 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 C10orf120Q5SQS8 335 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 TRIM10Q9UDY6 481 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 NAGPAQ9UK23 515 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 SPATA2Q9UM82 520 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 SCTRP47872 440 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 CCNG1P51959 295 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 HDHD2Q9H0R4 259 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 KCNF1Q9H3M0 494 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 RPS6KB2Q9UBS0 482 aa13.85□□□□□ -0.19
LDLRAD4-203ENST00000399848 TPST1O60507 370 aa13.84□□□□□ -0.19
LDLRAD4-203ENST00000399848 IRF1P10914 325 aa13.84□□□□□ -0.19
LDLRAD4-203ENST00000399848 TFE3P19532 575 aaPredicted RBP13.84□□□□□ -0.19
LDLRAD4-203ENST00000399848 GRK2P25098 689 aa13.84□□□□□ -0.19
LDLRAD4-203ENST00000399848 ALDH7A1P49419 539 aaKnown RBP13.84□□□□□ -0.19
LDLRAD4-203ENST00000399848 FXR1P51114 621 aaKnown RBP eCLIP13.84□□□□□ -0.19
LDLRAD4-203ENST00000399848 TDRD10Q5VZ19 366 aaKnown RBP13.84□□□□□ -0.19
LDLRAD4-203ENST00000399848 AVENQ9NQS1 362 aaPredicted RBP13.84□□□□□ -0.19
LDLRAD4-203ENST00000399848 NCKIPSDQ9NZQ3 722 aa13.84□□□□□ -0.19
LDLRAD4-203ENST00000399848 MYBP10242 640 aa13.84□□□□□ -0.19
LDLRAD4-203ENST00000399848 TGM3Q08188 693 aa13.84□□□□□ -0.19
LDLRAD4-203ENST00000399848 ZNF543Q08ER8 600 aa13.84□□□□□ -0.19
LDLRAD4-203ENST00000399848 TSNQ15631 228 aaKnown RBP13.84□□□□□ -0.19
LDLRAD4-203ENST00000399848 PNMA8BQ9ULN7 279 aaPredicted RBP13.84□□□□□ -0.19
LDLRAD4-203ENST00000399848 KIF20BQ96Q89 1820 aa13.84□□□□□ -0.19
LDLRAD4-203ENST00000399848 BMP10O95393 424 aa13.84□□□□□ -0.19
LDLRAD4-203ENST00000399848 GH1P01241 217 aa13.84□□□□□ -0.19
LDLRAD4-203ENST00000399848 IL6P05231 212 aa13.84□□□□□ -0.19
LDLRAD4-203ENST00000399848 VEGFAP15692 232 aaPredicted RBP13.84□□□□□ -0.19
LDLRAD4-203ENST00000399848 GTF2H1P32780 548 aa13.84□□□□□ -0.19
LDLRAD4-203ENST00000399848 ACAD10Q6JQN1 1059 aa13.84□□□□□ -0.19
LDLRAD4-203ENST00000399848 CES5AQ6NT32 575 aa13.84□□□□□ -0.19
LDLRAD4-203ENST00000399848 XRRA1Q6P2D8 792 aa13.84□□□□□ -0.19
LDLRAD4-203ENST00000399848 WDR36Q8NI36 951 aaKnown RBP13.84□□□□□ -0.19
LDLRAD4-203ENST00000399848 ZFRQ96KR1 1074 aaKnown RBP13.84□□□□□ -0.19
LDLRAD4-203ENST00000399848 PMPCBO75439 489 aa13.84□□□□□ -0.19
LDLRAD4-203ENST00000399848 ATP6V1B2P21281 511 aa13.84□□□□□ -0.19
LDLRAD4-203ENST00000399848 MTMR4Q9NYA4 1195 aa13.84□□□□□ -0.19
LDLRAD4-203ENST00000399848 SLC11A2P49281 568 aa13.84□□□□□ -0.19
LDLRAD4-203ENST00000399848 ATP6AP1LQ52LC2 224 aa13.84□□□□□ -0.19
LDLRAD4-203ENST00000399848 VPS33AQ96AX1 596 aa13.84□□□□□ -0.19
LDLRAD4-203ENST00000399848 VCPKMTQ9H867 229 aa13.84□□□□□ -0.19
LDLRAD4-203ENST00000399848 DRG1Q9Y295 367 aaKnown RBP13.84□□□□□ -0.19
LDLRAD4-203ENST00000399848 C19orf81C9J6K1 198 aa13.84□□□□□ -0.19
LDLRAD4-203ENST00000399848 PRKCEQ02156 737 aa13.84□□□□□ -0.19
LDLRAD4-203ENST00000399848 ILF2Q12905 390 aaKnown RBP13.84□□□□□ -0.19
LDLRAD4-203ENST00000399848 TAB1Q15750 504 aa13.84□□□□□ -0.19
LDLRAD4-203ENST00000399848 OSBPL6Q9BZF3 934 aa13.84□□□□□ -0.19
LDLRAD4-203ENST00000399848 UBA2Q9UBT2 640 aaPredicted RBP13.84□□□□□ -0.19
LDLRAD4-203ENST00000399848 ETFBP38117 255 aa13.84□□□□□ -0.19
LDLRAD4-203ENST00000399848 MGAT5BQ3V5L5 792 aa13.84□□□□□ -0.19
LDLRAD4-203ENST00000399848 ALFQ53S48 1182 aa13.84□□□□□ -0.19
LDLRAD4-203ENST00000399848 MFSD4BQ5TF39 518 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms