RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 GBP6Q6ZN66 633 aa14.87□□□□□ -0.03
HLA-DQB1-202ENST00000399079 PIGZQ86VD9 579 aa14.87□□□□□ -0.03
HLA-DQB1-202ENST00000399079 RBBP8NLQ8NC74 664 aaPredicted RBP14.87□□□□□ -0.03
HLA-DQB1-202ENST00000399079 PDZD8Q8NEN9 1154 aa14.87□□□□□ -0.03
HLA-DQB1-202ENST00000399079 PJA1Q8NG27 643 aa14.87□□□□□ -0.03
HLA-DQB1-202ENST00000399079 UBA3Q8TBC4 463 aa14.87□□□□□ -0.03
HLA-DQB1-202ENST00000399079 CSGALNACT1Q8TDX6 532 aa14.87□□□□□ -0.03
HLA-DQB1-202ENST00000399079 SH3RF2Q8TEC5 729 aa14.87□□□□□ -0.03
HLA-DQB1-202ENST00000399079 OVCA2Q8WZ82 227 aa14.87□□□□□ -0.03
HLA-DQB1-202ENST00000399079 FAM83CQ9BQN1 747 aa14.87□□□□□ -0.03
HLA-DQB1-202ENST00000399079 EBF3Q9H4W6 596 aa14.87□□□□□ -0.03
HLA-DQB1-202ENST00000399079 PNPLA8Q9NP80 782 aa14.87□□□□□ -0.03
HLA-DQB1-202ENST00000399079 ANO10Q9NW15 660 aa14.87□□□□□ -0.03
HLA-DQB1-202ENST00000399079 THG1LQ9NWX6 298 aaKnown RBP14.87□□□□□ -0.03
HLA-DQB1-202ENST00000399079 COMMD8Q9NX08 183 aa14.87□□□□□ -0.03
HLA-DQB1-202ENST00000399079 OSER1Q9NX31 292 aa14.87□□□□□ -0.03
HLA-DQB1-202ENST00000399079 KMT2EQ8IZD2 1858 aa14.87□□□□□ -0.03
HLA-DQB1-202ENST00000399079 DMDP11532 3685 aa14.87□□□□□ -0.03
HLA-DQB1-202ENST00000399079 OTOL1A6NHN0 477 aaPredicted RBP14.87□□□□□ -0.03
HLA-DQB1-202ENST00000399079 O00370 1275 aa14.87□□□□□ -0.03
HLA-DQB1-202ENST00000399079 PES1O00541 588 aaKnown RBP14.87□□□□□ -0.03
HLA-DQB1-202ENST00000399079 COCHO43405 550 aa14.87□□□□□ -0.03
HLA-DQB1-202ENST00000399079 OLFM2O95897 454 aa14.87□□□□□ -0.03
HLA-DQB1-202ENST00000399079 PAEPP09466 180 aa14.87□□□□□ -0.03
HLA-DQB1-202ENST00000399079 VDRP11473 427 aa14.87□□□□□ -0.03
HLA-DQB1-202ENST00000399079 BRD2P25440 801 aaKnown RBP14.87□□□□□ -0.03
HLA-DQB1-202ENST00000399079 PDE4CQ08493 712 aa14.87□□□□□ -0.03
HLA-DQB1-202ENST00000399079 MTF1Q14872 753 aa14.87□□□□□ -0.03
HLA-DQB1-202ENST00000399079 TCP11X2Q5H9J9 407 aa14.87□□□□□ -0.03
HLA-DQB1-202ENST00000399079 SNX30Q5VWJ9 437 aa14.87□□□□□ -0.03
HLA-DQB1-202ENST00000399079 HPS4Q9NQG7 708 aa14.87□□□□□ -0.03
HLA-DQB1-202ENST00000399079 FANCLQ9NW38 375 aa14.87□□□□□ -0.03
HLA-DQB1-202ENST00000399079 ARHGAP26Q9UNA1 814 aa14.87□□□□□ -0.03
HLA-DQB1-202ENST00000399079 SCML2Q9UQR0 700 aa14.87□□□□□ -0.03
HLA-DQB1-202ENST00000399079 CPQQ9Y646 472 aa14.87□□□□□ -0.03
HLA-DQB1-202ENST00000399079 COL4A2P08572 1712 aa14.86□□□□□ -0.03
HLA-DQB1-202ENST00000399079 GTPBP10A4D1E9 387 aaKnown RBP14.86□□□□□ -0.03
HLA-DQB1-202ENST00000399079 FAM170BA6NMN3 283 aa14.86□□□□□ -0.03
HLA-DQB1-202ENST00000399079 LEFTY2O00292 366 aa14.86□□□□□ -0.03
HLA-DQB1-202ENST00000399079 SCAMP3O14828 347 aaKnown RBP14.86□□□□□ -0.03
HLA-DQB1-202ENST00000399079 TBX18O95935 607 aa14.86□□□□□ -0.03
HLA-DQB1-202ENST00000399079 MBL2P11226 248 aaPredicted RBP14.86□□□□□ -0.03
HLA-DQB1-202ENST00000399079 KRT5P13647 590 aa14.86□□□□□ -0.03
HLA-DQB1-202ENST00000399079 ARSAP15289 507 aa14.86□□□□□ -0.03
HLA-DQB1-202ENST00000399079 TARSP26639 723 aaKnown RBP14.86□□□□□ -0.03
HLA-DQB1-202ENST00000399079 PDE6CP51160 858 aa14.86□□□□□ -0.03
HLA-DQB1-202ENST00000399079 KPNA1P52294 538 aaPredicted RBP14.86□□□□□ -0.03
HLA-DQB1-202ENST00000399079 ZNF132P52740 706 aa14.86□□□□□ -0.03
HLA-DQB1-202ENST00000399079 SLC7A9P82251 487 aa14.86□□□□□ -0.03
HLA-DQB1-202ENST00000399079 PLCB2Q00722 1185 aa14.86□□□□□ -0.03
HLA-DQB1-202ENST00000399079 TYRO3Q06418 890 aa14.86□□□□□ -0.03
HLA-DQB1-202ENST00000399079 USP4Q13107 963 aa14.86□□□□□ -0.03
HLA-DQB1-202ENST00000399079 ARHGAP44Q17R89 818 aa14.86□□□□□ -0.03
HLA-DQB1-202ENST00000399079 HECTD3Q5T447 861 aa14.86□□□□□ -0.03
HLA-DQB1-202ENST00000399079 CC2D1AQ6P1N0 951 aaPredicted RBP14.86□□□□□ -0.03
HLA-DQB1-202ENST00000399079 ZNF852Q6ZMS4 543 aa14.86□□□□□ -0.03
HLA-DQB1-202ENST00000399079 PRSS33Q8NF86 280 aa14.86□□□□□ -0.03
HLA-DQB1-202ENST00000399079 LINC00597Q9H2U6 94 aa14.86□□□□□ -0.03
HLA-DQB1-202ENST00000399079 NMUR1Q9HB89 426 aa14.86□□□□□ -0.03
HLA-DQB1-202ENST00000399079 LTB4R2Q9NPC1 389 aa14.86□□□□□ -0.03
HLA-DQB1-202ENST00000399079 SIX2Q9NPC8 291 aa14.86□□□□□ -0.03
HLA-DQB1-202ENST00000399079 ACP6Q9NPH0 428 aa14.86□□□□□ -0.03
HLA-DQB1-202ENST00000399079 TLR8Q9NR97 1041 aaKnown RBP14.86□□□□□ -0.03
HLA-DQB1-202ENST00000399079 HESX1Q9UBX0 185 aa14.86□□□□□ -0.03
HLA-DQB1-202ENST00000399079 APEX2Q9UBZ4 518 aa14.86□□□□□ -0.03
HLA-DQB1-202ENST00000399079 NDRG2Q9UN36 371 aaKnown RBP14.86□□□□□ -0.03
HLA-DQB1-202ENST00000399079 WNT6Q9Y6F9 365 aa14.86□□□□□ -0.03
HLA-DQB1-202ENST00000399079 USP3Q9Y6I4 520 aa14.86□□□□□ -0.03
HLA-DQB1-202ENST00000399079 PATJQ8NI35 1801 aa14.85□□□□□ -0.03
HLA-DQB1-202ENST00000399079 A0A1W2PQH9 124 aa14.85□□□□□ -0.03
HLA-DQB1-202ENST00000399079 TLR5O60602 858 aa14.85□□□□□ -0.03
HLA-DQB1-202ENST00000399079 PFKLP17858 780 aa14.85□□□□□ -0.03
HLA-DQB1-202ENST00000399079 EEF1GP26641 437 aaKnown RBP14.85□□□□□ -0.03
HLA-DQB1-202ENST00000399079 BCAT1P54687 386 aa14.85□□□□□ -0.03
HLA-DQB1-202ENST00000399079 SLC8A3P57103 927 aa14.85□□□□□ -0.03
HLA-DQB1-202ENST00000399079 KCNMA1Q12791 1236 aa14.85□□□□□ -0.03
HLA-DQB1-202ENST00000399079 RAB41Q5JT25 222 aa14.85□□□□□ -0.03
HLA-DQB1-202ENST00000399079 CDKAL1Q5VV42 579 aa14.85□□□□□ -0.03
HLA-DQB1-202ENST00000399079 TXNDC11Q6PKC3 985 aa14.85□□□□□ -0.03
HLA-DQB1-202ENST00000399079 CCDC105Q8IYK2 499 aa14.85□□□□□ -0.03
HLA-DQB1-202ENST00000399079 FAM3CQ92520 227 aa14.85□□□□□ -0.03
HLA-DQB1-202ENST00000399079 ZFRQ96KR1 1074 aaKnown RBP14.85□□□□□ -0.03
HLA-DQB1-202ENST00000399079 TAB2Q9NYJ8 693 aa14.85□□□□□ -0.03
HLA-DQB1-202ENST00000399079 DLGAP2Q9P1A6 1054 aa14.85□□□□□ -0.03
HLA-DQB1-202ENST00000399079 AJAP1Q9UKB5 411 aaPredicted RBP14.85□□□□□ -0.03
HLA-DQB1-202ENST00000399079 NUDT5Q9UKK9 219 aa14.85□□□□□ -0.03
HLA-DQB1-202ENST00000399079 KIAA1257Q9ULG3 409 aa14.85□□□□□ -0.03
HLA-DQB1-202ENST00000399079 CNTN6Q9UQ52 1028 aa14.85□□□□□ -0.03
HLA-DQB1-202ENST00000399079 VPS13AQ96RL7 3174 aa14.84□□□□□ -0.03
HLA-DQB1-202ENST00000399079 BECN2A8MW95 431 aa14.84□□□□□ -0.03
HLA-DQB1-202ENST00000399079 SPECC1L-ADORA2AF8WAN1 911 aa14.84□□□□□ -0.03
HLA-DQB1-202ENST00000399079 TUBP50607 506 aa14.84□□□□□ -0.03
HLA-DQB1-202ENST00000399079 TKTL1P51854 596 aa14.84□□□□□ -0.03
HLA-DQB1-202ENST00000399079 MFAP3P55082 362 aa14.84□□□□□ -0.03
HLA-DQB1-202ENST00000399079 BST2Q10589 180 aaKnown RBP14.84□□□□□ -0.03
HLA-DQB1-202ENST00000399079 TCF15Q12870 199 aa14.84□□□□□ -0.03
HLA-DQB1-202ENST00000399079 RUNX3Q13761 415 aa14.84□□□□□ -0.03
HLA-DQB1-202ENST00000399079 CNGA2Q16280 664 aa14.84□□□□□ -0.03
HLA-DQB1-202ENST00000399079 ITPRIPL2Q3MIP1 535 aa14.84□□□□□ -0.03
HLA-DQB1-202ENST00000399079 PKDCCQ504Y2 493 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms