RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 ENDOVQ8N8Q3 282 aaKnown RBP26.68■■□□□ 1.86
COL13A1-203ENST00000398969 NUDCD1Q96RS6 583 aa26.68■■□□□ 1.86
COL13A1-203ENST00000398969 ELOVL4Q9GZR5 314 aa26.68■■□□□ 1.86
COL13A1-203ENST00000398969 SMYD3Q9H7B4 428 aa26.68■■□□□ 1.86
COL13A1-203ENST00000398969 A0A0G2JND7 137 aa26.68■■□□□ 1.86
COL13A1-203ENST00000398969 E7ENQ6 273 aa26.68■■□□□ 1.86
COL13A1-203ENST00000398969 STIP1P31948 543 aaKnown RBP26.68■■□□□ 1.86
COL13A1-203ENST00000398969 ZNF200P98182 395 aaPredicted RBP26.68■■□□□ 1.86
COL13A1-203ENST00000398969 KCNJ11Q14654 390 aa26.68■■□□□ 1.86
COL13A1-203ENST00000398969 DARS2Q6PI48 645 aaKnown RBP26.68■■□□□ 1.86
COL13A1-203ENST00000398969 SH2D5Q6ZV89 423 aa26.68■■□□□ 1.86
COL13A1-203ENST00000398969 EEPD1Q7L9B9 569 aa26.68■■□□□ 1.86
COL13A1-203ENST00000398969 ZC3H18Q86VM9 953 aaKnown RBP26.68■■□□□ 1.86
COL13A1-203ENST00000398969 CHSY1Q86X52 802 aa26.68■■□□□ 1.86
COL13A1-203ENST00000398969 OPTNQ96CV9 577 aa26.68■■□□□ 1.86
COL13A1-203ENST00000398969 FZD8Q9H461 694 aa26.68■■□□□ 1.86
COL13A1-203ENST00000398969 DENND2DQ9H6A0 471 aaPredicted RBP26.68■■□□□ 1.86
COL13A1-203ENST00000398969 ASNSD1Q9NWL6 643 aa26.68■■□□□ 1.86
COL13A1-203ENST00000398969 RPL26L1Q9UNX3 145 aaKnown RBP26.68■■□□□ 1.86
COL13A1-203ENST00000398969 IKBKGQ9Y6K9 419 aa26.68■■□□□ 1.86
COL13A1-203ENST00000398969 CNMDO75829 334 aa26.67■■□□□ 1.86
COL13A1-203ENST00000398969 ENDOD1O94919 500 aa26.67■■□□□ 1.86
COL13A1-203ENST00000398969 TGFB3P10600 412 aa26.67■■□□□ 1.86
COL13A1-203ENST00000398969 SLC18A2Q05940 514 aa26.67■■□□□ 1.86
COL13A1-203ENST00000398969 FAAP100Q0VG06 881 aa26.67■■□□□ 1.86
COL13A1-203ENST00000398969 C1orf127Q8N9H9 656 aa26.67■■□□□ 1.86
COL13A1-203ENST00000398969 MIPEPQ99797 713 aa26.67■■□□□ 1.86
COL13A1-203ENST00000398969 INO80B-WBP1J3KQ70 363 aa26.67■■□□□ 1.86
COL13A1-203ENST00000398969 GJB1P08034 283 aa26.67■■□□□ 1.86
COL13A1-203ENST00000398969 NFICP08651 508 aa26.67■■□□□ 1.86
COL13A1-203ENST00000398969 PCK1P35558 622 aa26.67■■□□□ 1.86
COL13A1-203ENST00000398969 TAF11Q15544 211 aa26.67■■□□□ 1.86
COL13A1-203ENST00000398969 ADPGKQ9BRR6 497 aa26.67■■□□□ 1.86
COL13A1-203ENST00000398969 INO80BQ9C086 356 aaPredicted RBP26.67■■□□□ 1.86
COL13A1-203ENST00000398969 CDT1Q9H211 546 aa26.67■■□□□ 1.86
COL13A1-203ENST00000398969 HEY2Q9UBP5 337 aa26.67■■□□□ 1.86
COL13A1-203ENST00000398969 WDR3Q9UNX4 943 aaKnown RBP eCLIP26.67■■□□□ 1.86
COL13A1-203ENST00000398969 M0QYV0 167 aa26.66■■□□□ 1.86
COL13A1-203ENST00000398969 INHBAP08476 426 aa26.66■■□□□ 1.86
COL13A1-203ENST00000398969 YWHAGP61981 247 aaKnown RBP eCLIP26.66■■□□□ 1.86
COL13A1-203ENST00000398969 TMEM132AQ24JP5 1023 aa26.66■■□□□ 1.86
COL13A1-203ENST00000398969 SYCP2LQ5T4T6 812 aa26.66■■□□□ 1.86
COL13A1-203ENST00000398969 FAM102AQ5T9C2 384 aaPredicted RBP26.66■■□□□ 1.86
COL13A1-203ENST00000398969 TTC8Q8TAM2 541 aa26.66■■□□□ 1.86
COL13A1-203ENST00000398969 NLRP4Q96MN2 994 aa26.66■■□□□ 1.86
COL13A1-203ENST00000398969 FAM111AQ96PZ2 611 aa26.66■■□□□ 1.86
COL13A1-203ENST00000398969 RPF1Q9H9Y2 349 aaKnown RBP26.66■■□□□ 1.86
COL13A1-203ENST00000398969 STAU2Q9NUL3 570 aaKnown RBP eCLIP26.66■■□□□ 1.86
COL13A1-203ENST00000398969 CILPO75339 1184 aa26.65■■□□□ 1.86
COL13A1-203ENST00000398969 HAUS5O94927 633 aa26.65■■□□□ 1.86
COL13A1-203ENST00000398969 IL18RAPO95256 599 aa26.65■■□□□ 1.86
COL13A1-203ENST00000398969 GPD2P43304 727 aa26.65■■□□□ 1.86
COL13A1-203ENST00000398969 ZNF143P52747 638 aaPredicted RBP26.65■■□□□ 1.86
COL13A1-203ENST00000398969 CDH6P55285 790 aa26.65■■□□□ 1.86
COL13A1-203ENST00000398969 PRKD1Q15139 912 aaPredicted RBP26.65■■□□□ 1.86
COL13A1-203ENST00000398969 SH3PXD2AQ5TCZ1 1133 aa26.65■■□□□ 1.86
COL13A1-203ENST00000398969 CYP4V2Q6ZWL3 525 aaPredicted RBP26.65■■□□□ 1.86
COL13A1-203ENST00000398969 SH3TC2Q8TF17 1288 aa26.65■■□□□ 1.86
COL13A1-203ENST00000398969 TMEM176AQ96HP8 235 aa26.65■■□□□ 1.86
COL13A1-203ENST00000398969 KCNK13Q9HB14 408 aa26.65■■□□□ 1.86
COL13A1-203ENST00000398969 ARFIP2P53365 341 aa26.65■■□□□ 1.86
COL13A1-203ENST00000398969 WDR78Q5VTH9 848 aa26.65■■□□□ 1.86
COL13A1-203ENST00000398969 PTCD3Q96EY7 689 aaKnown RBP26.65■■□□□ 1.86
COL13A1-203ENST00000398969 GPR20Q99678 358 aa26.65■■□□□ 1.86
COL13A1-203ENST00000398969 CHADO15335 359 aa26.64■■□□□ 1.86
COL13A1-203ENST00000398969 ENTPD5O75356 428 aa26.64■■□□□ 1.86
COL13A1-203ENST00000398969 AVILO75366 819 aa26.64■■□□□ 1.86
COL13A1-203ENST00000398969 SPAG6O75602 509 aa26.64■■□□□ 1.86
COL13A1-203ENST00000398969 ARIH2O95376 493 aa26.64■■□□□ 1.86
COL13A1-203ENST00000398969 TGDSO95455 350 aa26.64■■□□□ 1.86
COL13A1-203ENST00000398969 PYGBP11216 843 aa26.64■■□□□ 1.86
COL13A1-203ENST00000398969 CDC25CP30307 473 aa26.64■■□□□ 1.86
COL13A1-203ENST00000398969 GPR162Q16538 588 aa26.64■■□□□ 1.86
COL13A1-203ENST00000398969 HSDL1Q3SXM5 330 aa26.64■■□□□ 1.86
COL13A1-203ENST00000398969 RAB6CQ53S08 254 aa26.64■■□□□ 1.86
COL13A1-203ENST00000398969 EXOC8Q8IYI6 725 aa26.64■■□□□ 1.86
COL13A1-203ENST00000398969 TTC17Q96AE7 1141 aa26.64■■□□□ 1.86
COL13A1-203ENST00000398969 NAF1Q96HR8 494 aaKnown RBP26.64■■□□□ 1.86
COL13A1-203ENST00000398969 FAXDC2Q96IV6 333 aa26.64■■□□□ 1.86
COL13A1-203ENST00000398969 RAB6CQ9H0N0 254 aa26.64■■□□□ 1.86
COL13A1-203ENST00000398969 R3HDMLQ9H3Y0 253 aa26.64■■□□□ 1.86
COL13A1-203ENST00000398969 ARL8BQ9NVJ2 186 aa26.64■■□□□ 1.86
COL13A1-203ENST00000398969 LRRC42Q9Y546 428 aa26.64■■□□□ 1.86
COL13A1-203ENST00000398969 CFAP69A5D8W1 941 aa26.64■■□□□ 1.85
COL13A1-203ENST00000398969 DNAJC6O75061 913 aa26.64■■□□□ 1.85
COL13A1-203ENST00000398969 LGR5O75473 907 aa26.64■■□□□ 1.85
COL13A1-203ENST00000398969 ITGB3P05106 788 aa26.64■■□□□ 1.85
COL13A1-203ENST00000398969 TRAPPC12Q8WVT3 735 aa26.64■■□□□ 1.85
COL13A1-203ENST00000398969 SKA1Q96BD8 255 aa26.64■■□□□ 1.85
COL13A1-203ENST00000398969 FAF2Q96CS3 445 aa26.64■■□□□ 1.85
COL13A1-203ENST00000398969 TMEM120AQ9BXJ8 343 aa26.64■■□□□ 1.85
COL13A1-203ENST00000398969 CADM1Q9BY67 442 aaKnown RBP26.64■■□□□ 1.85
COL13A1-203ENST00000398969 TXNRD2Q9NNW7 524 aa26.64■■□□□ 1.85
COL13A1-203ENST00000398969 CNTN3Q9P232 1028 aa26.64■■□□□ 1.85
COL13A1-203ENST00000398969 CCDC22O60826 627 aa26.63■■□□□ 1.85
COL13A1-203ENST00000398969 GPD1P21695 349 aa26.63■■□□□ 1.85
COL13A1-203ENST00000398969 BGNP21810 368 aa26.63■■□□□ 1.85
COL13A1-203ENST00000398969 CDK16Q00536 496 aa26.63■■□□□ 1.85
COL13A1-203ENST00000398969 TRNP1Q6NT89 227 aa26.63■■□□□ 1.85
COL13A1-203ENST00000398969 FASTKD5Q7L8L6 764 aaKnown RBP26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms