RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.23□□□□□ -0.13
VCX3A-202ENST00000398729 SEMA4GQ9NTN9 838 aa14.23□□□□□ -0.13
VCX3A-202ENST00000398729 HELZP42694 1942 aaKnown RBP14.23□□□□□ -0.13
VCX3A-202ENST00000398729 ZFYVE26Q68DK2 2539 aa14.22□□□□□ -0.13
VCX3A-202ENST00000398729 BAHCC1Q9P281 2608 aa14.22□□□□□ -0.13
VCX3A-202ENST00000398729 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.22□□□□□ -0.13
VCX3A-202ENST00000398729 OTOL1A6NHN0 477 aaPredicted RBP14.22□□□□□ -0.13
VCX3A-202ENST00000398729 TRDMT1O14717 391 aaKnown RBP14.22□□□□□ -0.13
VCX3A-202ENST00000398729 LRP3O75074 770 aa14.22□□□□□ -0.13
VCX3A-202ENST00000398729 AP1G2O75843 785 aa14.22□□□□□ -0.13
VCX3A-202ENST00000398729 CCDC130P13994 396 aa14.22□□□□□ -0.13
VCX3A-202ENST00000398729 SLC7A9P82251 487 aa14.22□□□□□ -0.13
VCX3A-202ENST00000398729 GRSF1Q12849 480 aaKnown RBP eCLIP14.22□□□□□ -0.13
VCX3A-202ENST00000398729 SRSF5Q13243 272 aaKnown RBP14.22□□□□□ -0.13
VCX3A-202ENST00000398729 COBLL1Q53SF7 1204 aa14.22□□□□□ -0.13
VCX3A-202ENST00000398729 TMEM196Q5HYL7 178 aa14.22□□□□□ -0.13
VCX3A-202ENST00000398729 KRT39Q6A163 491 aa14.22□□□□□ -0.13
VCX3A-202ENST00000398729 Q6ZS52 159 aa14.22□□□□□ -0.13
VCX3A-202ENST00000398729 PAQR9Q6ZVX9 377 aa14.22□□□□□ -0.13
VCX3A-202ENST00000398729 FUKQ8N0W3 1084 aa14.22□□□□□ -0.13
VCX3A-202ENST00000398729 OVCA2Q8WZ82 227 aa14.22□□□□□ -0.13
VCX3A-202ENST00000398729 EEF2KMTQ96G04 330 aa14.22□□□□□ -0.13
VCX3A-202ENST00000398729 TSG101Q99816 390 aa14.22□□□□□ -0.13
VCX3A-202ENST00000398729 DNAI2Q9GZS0 605 aa14.22□□□□□ -0.13
VCX3A-202ENST00000398729 ECT2Q9H8V3 914 aa14.22□□□□□ -0.13
VCX3A-202ENST00000398729 KRT82Q9NSB4 513 aa14.22□□□□□ -0.13
VCX3A-202ENST00000398729 C2orf42Q9NWW7 574 aa14.22□□□□□ -0.13
VCX3A-202ENST00000398729 HMGXB4Q9UGU5 601 aa14.22□□□□□ -0.13
VCX3A-202ENST00000398729 PCDHA5Q9Y5H7 936 aa14.22□□□□□ -0.13
VCX3A-202ENST00000398729 WNT6Q9Y6F9 365 aa14.22□□□□□ -0.13
VCX3A-202ENST00000398729 RALGAPA1Q6GYQ0 2036 aa14.21□□□□□ -0.13
VCX3A-202ENST00000398729 CHURC1-FNTBB4DL54 471 aa14.21□□□□□ -0.13
VCX3A-202ENST00000398729 STX10O60499 249 aa14.21□□□□□ -0.13
VCX3A-202ENST00000398729 OLFM2O95897 454 aa14.21□□□□□ -0.13
VCX3A-202ENST00000398729 GJA4P35212 333 aa14.21□□□□□ -0.13
VCX3A-202ENST00000398729 FNTBP49356 437 aa14.21□□□□□ -0.13
VCX3A-202ENST00000398729 SLC5A3P53794 718 aa14.21□□□□□ -0.13
VCX3A-202ENST00000398729 MCCD1P59942 119 aaPredicted RBP14.21□□□□□ -0.13
VCX3A-202ENST00000398729 INCA1Q0VD86 236 aa14.21□□□□□ -0.13
VCX3A-202ENST00000398729 NR1H3Q13133 447 aa14.21□□□□□ -0.13
VCX3A-202ENST00000398729 ORC1Q13415 861 aa14.21□□□□□ -0.13
VCX3A-202ENST00000398729 EML3Q32P44 896 aa14.21□□□□□ -0.13
VCX3A-202ENST00000398729 PRR23BQ6ZRT6 265 aa14.21□□□□□ -0.13
VCX3A-202ENST00000398729 KIAA1958Q8N8K9 716 aa14.21□□□□□ -0.13
VCX3A-202ENST00000398729 SPATA20Q8TB22 786 aa14.21□□□□□ -0.13
VCX3A-202ENST00000398729 SLC2A14Q8TDB8 520 aa14.21□□□□□ -0.13
VCX3A-202ENST00000398729 NT5C1AQ9BXI3 368 aa14.21□□□□□ -0.13
VCX3A-202ENST00000398729 NIF3L1Q9GZT8 377 aa14.21□□□□□ -0.13
VCX3A-202ENST00000398729 RNF38Q9H0F5 515 aa14.21□□□□□ -0.13
VCX3A-202ENST00000398729 APOBEC3GQ9HC16 384 aaKnown RBP14.21□□□□□ -0.13
VCX3A-202ENST00000398729 FAM49BQ9NUQ9 324 aa14.21□□□□□ -0.13
VCX3A-202ENST00000398729 COMMD8Q9NX08 183 aa14.21□□□□□ -0.13
VCX3A-202ENST00000398729 RAB23Q9ULC3 237 aa14.21□□□□□ -0.13
VCX3A-202ENST00000398729 MYH10P35580 1976 aa14.21□□□□□ -0.13
VCX3A-202ENST00000398729 FAM208BQ5VWN6 2430 aa14.2□□□□□ -0.14
VCX3A-202ENST00000398729 K7ESF4 209 aa14.2□□□□□ -0.14
VCX3A-202ENST00000398729 LEFTY2O00292 366 aa14.2□□□□□ -0.14
VCX3A-202ENST00000398729 TNFRSF10BO14763 440 aa14.2□□□□□ -0.14
VCX3A-202ENST00000398729 PAPSS2O95340 614 aaPredicted RBP14.2□□□□□ -0.14
VCX3A-202ENST00000398729 NFATC1O95644 943 aa14.2□□□□□ -0.14
VCX3A-202ENST00000398729 OAS1P00973 400 aaKnown RBP14.2□□□□□ -0.14
VCX3A-202ENST00000398729 FAM200BP0CF97 657 aa14.2□□□□□ -0.14
VCX3A-202ENST00000398729 DRD1P21728 446 aa14.2□□□□□ -0.14
VCX3A-202ENST00000398729 MXI1P50539 228 aa14.2□□□□□ -0.14
VCX3A-202ENST00000398729 ZXDBP98169 803 aa14.2□□□□□ -0.14
VCX3A-202ENST00000398729 FKBP3Q00688 224 aaKnown RBP14.2□□□□□ -0.14
VCX3A-202ENST00000398729 STIM1Q13586 685 aa14.2□□□□□ -0.14
VCX3A-202ENST00000398729 SIM2Q14190 667 aaPredicted RBP14.2□□□□□ -0.14
VCX3A-202ENST00000398729 CSRP2Q16527 193 aa14.2□□□□□ -0.14
VCX3A-202ENST00000398729 FSTL4Q6MZW2 842 aa14.2□□□□□ -0.14
VCX3A-202ENST00000398729 PRR23CQ6ZRP0 262 aa14.2□□□□□ -0.14
VCX3A-202ENST00000398729 DDX42Q86XP3 938 aaKnown RBP eCLIP14.2□□□□□ -0.14
VCX3A-202ENST00000398729 ELOA2Q8IYF1 753 aaPredicted RBP14.2□□□□□ -0.14
VCX3A-202ENST00000398729 C12orf29Q8N999 325 aa14.2□□□□□ -0.14
VCX3A-202ENST00000398729 SCAMP5Q8TAC9 235 aa14.2□□□□□ -0.14
VCX3A-202ENST00000398729 ERCC4Q92889 916 aaPredicted RBP14.2□□□□□ -0.14
VCX3A-202ENST00000398729 CHFRQ96EP1 664 aa14.2□□□□□ -0.14
VCX3A-202ENST00000398729 FAXDC2Q96IV6 333 aa14.2□□□□□ -0.14
VCX3A-202ENST00000398729 P2RY13Q9BPV8 354 aa14.2□□□□□ -0.14
VCX3A-202ENST00000398729 CSNK1G1Q9HCP0 422 aa14.2□□□□□ -0.14
VCX3A-202ENST00000398729 SMPD4Q9NXE4 827 aa14.2□□□□□ -0.14
VCX3A-202ENST00000398729 IL37Q9NZH6 218 aa14.2□□□□□ -0.14
VCX3A-202ENST00000398729 CHORDC1Q9UHD1 332 aaPredicted RBP14.2□□□□□ -0.14
VCX3A-202ENST00000398729 CPQQ9Y646 472 aa14.2□□□□□ -0.14
VCX3A-202ENST00000398729 SLC9A3R1O14745 358 aaPredicted RBP14.19□□□□□ -0.14
VCX3A-202ENST00000398729 TM4SF5O14894 197 aa14.19□□□□□ -0.14
VCX3A-202ENST00000398729 SLC16A3O15427 465 aaKnown RBP14.19□□□□□ -0.14
VCX3A-202ENST00000398729 ATG13O75143 517 aa14.19□□□□□ -0.14
VCX3A-202ENST00000398729 MBL2P11226 248 aaPredicted RBP14.19□□□□□ -0.14
VCX3A-202ENST00000398729 CD58P19256 250 aa14.19□□□□□ -0.14
VCX3A-202ENST00000398729 ADORA2BP29275 332 aa14.19□□□□□ -0.14
VCX3A-202ENST00000398729 GALK1P51570 392 aa14.19□□□□□ -0.14
VCX3A-202ENST00000398729 MAP3K7CLP57077 242 aa14.19□□□□□ -0.14
VCX3A-202ENST00000398729 LRRC63Q05C16 580 aa14.19□□□□□ -0.14
VCX3A-202ENST00000398729 FBXO43Q4G163 708 aa14.19□□□□□ -0.14
VCX3A-202ENST00000398729 DCAF17Q5H9S7 520 aaPredicted RBP14.19□□□□□ -0.14
VCX3A-202ENST00000398729 HECTD3Q5T447 861 aa14.19□□□□□ -0.14
VCX3A-202ENST00000398729 TCERG1LQ5VWI1 586 aa14.19□□□□□ -0.14
VCX3A-202ENST00000398729 SNX30Q5VWJ9 437 aa14.19□□□□□ -0.14
VCX3A-202ENST00000398729 ANKRD40Q6AI12 368 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms