RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 MEIOBQ8N635 442 aa10.48□□□□□ -0.73
NIFKP1-201ENST00000398317 LINC00301Q8NCQ3 95 aa10.48□□□□□ -0.73
NIFKP1-201ENST00000398317 RPLP0P6Q8NHW5 317 aa10.48□□□□□ -0.73
NIFKP1-201ENST00000398317 SPATA18Q8TC71 538 aa10.48□□□□□ -0.73
NIFKP1-201ENST00000398317 SH3RF2Q8TEC5 729 aa10.48□□□□□ -0.73
NIFKP1-201ENST00000398317 OSCP1Q8WVF1 389 aa10.48□□□□□ -0.73
NIFKP1-201ENST00000398317 GAB3Q8WWW8 586 aa10.48□□□□□ -0.73
NIFKP1-201ENST00000398317 FOXD4L4Q8WXT5 416 aaPredicted RBP10.48□□□□□ -0.73
NIFKP1-201ENST00000398317 ZNF775Q96BV0 537 aaPredicted RBP10.48□□□□□ -0.73
NIFKP1-201ENST00000398317 DHX58Q96C10 678 aa10.48□□□□□ -0.73
NIFKP1-201ENST00000398317 INTS4Q96HW7 963 aaKnown RBP10.48□□□□□ -0.73
NIFKP1-201ENST00000398317 FUBP3Q96I24 572 aaKnown RBP eCLIP10.48□□□□□ -0.73
NIFKP1-201ENST00000398317 MMS19Q96T76 1030 aa10.48□□□□□ -0.73
NIFKP1-201ENST00000398317 P2RY13Q9BPV8 354 aa10.48□□□□□ -0.73
NIFKP1-201ENST00000398317 TNMDQ9H2S6 317 aa10.48□□□□□ -0.73
NIFKP1-201ENST00000398317 LINC00597Q9H2U6 94 aa10.48□□□□□ -0.73
NIFKP1-201ENST00000398317 ZSCAN16Q9H4T2 348 aaPredicted RBP10.48□□□□□ -0.73
NIFKP1-201ENST00000398317 GCNT4Q9P109 453 aa10.48□□□□□ -0.73
NIFKP1-201ENST00000398317 CDH9Q9ULB4 789 aa10.48□□□□□ -0.73
NIFKP1-201ENST00000398317 NUP205Q92621 2012 aa10.48□□□□□ -0.73
NIFKP1-201ENST00000398317 ESPNB1AK53 854 aa10.47□□□□□ -0.73
NIFKP1-201ENST00000398317 KIAA0391O15091 583 aaKnown RBP10.47□□□□□ -0.73
NIFKP1-201ENST00000398317 CLIC2O15247 247 aa10.47□□□□□ -0.73
NIFKP1-201ENST00000398317 SPTLC2O15270 562 aa10.47□□□□□ -0.73
NIFKP1-201ENST00000398317 ATG13O75143 517 aa10.47□□□□□ -0.73
NIFKP1-201ENST00000398317 CST3P01034 146 aaPredicted RBP10.47□□□□□ -0.73
NIFKP1-201ENST00000398317 CCDC192P0DO97 292 aa10.47□□□□□ -0.73
NIFKP1-201ENST00000398317 DLATP10515 647 aaKnown RBP10.47□□□□□ -0.73
NIFKP1-201ENST00000398317 HDCP19113 662 aa10.47□□□□□ -0.73
NIFKP1-201ENST00000398317 DRD1P21728 446 aa10.47□□□□□ -0.73
NIFKP1-201ENST00000398317 WARSP23381 471 aaKnown RBP10.47□□□□□ -0.73
NIFKP1-201ENST00000398317 CASP1P29466 404 aa10.47□□□□□ -0.73
NIFKP1-201ENST00000398317 MAGEA11P43364 429 aa10.47□□□□□ -0.73
NIFKP1-201ENST00000398317 CYP2J2P51589 502 aa10.47□□□□□ -0.73
NIFKP1-201ENST00000398317 AMPD2Q01433 879 aa10.47□□□□□ -0.73
NIFKP1-201ENST00000398317 USP4Q13107 963 aa10.47□□□□□ -0.73
NIFKP1-201ENST00000398317 PSMD2Q13200 908 aa10.47□□□□□ -0.73
NIFKP1-201ENST00000398317 KCNB1Q14721 858 aa10.47□□□□□ -0.73
NIFKP1-201ENST00000398317 SF3A2Q15428 464 aaKnown RBP10.47□□□□□ -0.73
NIFKP1-201ENST00000398317 SURF1Q15526 300 aa10.47□□□□□ -0.73
NIFKP1-201ENST00000398317 EML3Q32P44 896 aa10.47□□□□□ -0.73
NIFKP1-201ENST00000398317 FOXD4L6Q3SYB3 417 aaPredicted RBP10.47□□□□□ -0.73
NIFKP1-201ENST00000398317 MDH1BQ5I0G3 518 aa10.47□□□□□ -0.73
NIFKP1-201ENST00000398317 PPM1JQ5JR12 505 aa10.47□□□□□ -0.73
NIFKP1-201ENST00000398317 FOXD4L3Q6VB84 417 aaPredicted RBP10.47□□□□□ -0.73
NIFKP1-201ENST00000398317 C4orf50Q6ZRC1 276 aa10.47□□□□□ -0.73
NIFKP1-201ENST00000398317 STXBP4Q6ZWJ1 553 aa10.47□□□□□ -0.73
NIFKP1-201ENST00000398317 DPH6Q7L8W6 267 aa10.47□□□□□ -0.73
NIFKP1-201ENST00000398317 TRAPPC11Q7Z392 1133 aa10.47□□□□□ -0.73
NIFKP1-201ENST00000398317 CACNA2D4Q7Z3S7 1137 aa10.47□□□□□ -0.73
NIFKP1-201ENST00000398317 NELFCDQ8IXH7 590 aa10.47□□□□□ -0.73
NIFKP1-201ENST00000398317 LINC00528Q8N1L1 170 aa10.47□□□□□ -0.73
NIFKP1-201ENST00000398317 FSIP1Q8NA03 581 aa10.47□□□□□ -0.73
NIFKP1-201ENST00000398317 EZH1Q92800 747 aaPredicted RBP10.47□□□□□ -0.73
NIFKP1-201ENST00000398317 CD101Q93033 1021 aa10.47□□□□□ -0.73
NIFKP1-201ENST00000398317 MRPL45Q9BRJ2 306 aaKnown RBP10.47□□□□□ -0.73
NIFKP1-201ENST00000398317 TRIM9Q9C026 710 aa10.47□□□□□ -0.73
NIFKP1-201ENST00000398317 SMOC1Q9H4F8 434 aa10.47□□□□□ -0.73
NIFKP1-201ENST00000398317 PRM3Q9NNZ6 103 aa10.47□□□□□ -0.73
NIFKP1-201ENST00000398317 CYLDQ9NQC7 956 aa10.47□□□□□ -0.73
NIFKP1-201ENST00000398317 KBTBD4Q9NVX7 518 aa10.47□□□□□ -0.73
NIFKP1-201ENST00000398317 PGPEP1Q9NXJ5 209 aa10.47□□□□□ -0.73
NIFKP1-201ENST00000398317 NME7Q9Y5B8 376 aa10.47□□□□□ -0.73
NIFKP1-201ENST00000398317 ANTXRLA6NF34 631 aa10.46□□□□□ -0.73
NIFKP1-201ENST00000398317 DCLK1O15075 740 aa10.46□□□□□ -0.73
NIFKP1-201ENST00000398317 TGFB1I1O43294 461 aa10.46□□□□□ -0.73
NIFKP1-201ENST00000398317 BMP2P12643 396 aa10.46□□□□□ -0.73
NIFKP1-201ENST00000398317 TNNI1P19237 187 aa10.46□□□□□ -0.73
NIFKP1-201ENST00000398317 ANXA13P27216 316 aa10.46□□□□□ -0.73
NIFKP1-201ENST00000398317 GNL1P36915 607 aaPredicted RBP10.46□□□□□ -0.73
NIFKP1-201ENST00000398317 RAP1GAPP47736 663 aa10.46□□□□□ -0.73
NIFKP1-201ENST00000398317 ZXDBP98169 803 aa10.46□□□□□ -0.73
NIFKP1-201ENST00000398317 SNRNP35Q16560 246 aaKnown RBP10.46□□□□□ -0.73
NIFKP1-201ENST00000398317 AASDHQ4L235 1098 aaPredicted RBP10.46□□□□□ -0.73
NIFKP1-201ENST00000398317 FAM26FQ5R3K3 315 aa10.46□□□□□ -0.73
NIFKP1-201ENST00000398317 SHC4Q6S5L8 630 aa10.46□□□□□ -0.73
NIFKP1-201ENST00000398317 EPM2AIP1Q7L775 607 aaPredicted RBP10.46□□□□□ -0.73
NIFKP1-201ENST00000398317 WDR49Q8IV35 697 aa10.46□□□□□ -0.73
NIFKP1-201ENST00000398317 OR6B3Q8NGW1 331 aa10.46□□□□□ -0.73
NIFKP1-201ENST00000398317 MYCBPAPQ8TBZ2 947 aa10.46□□□□□ -0.73
NIFKP1-201ENST00000398317 ZNF507Q8TCN5 953 aa10.46□□□□□ -0.73
NIFKP1-201ENST00000398317 ATP2A3Q93084 1043 aa10.46□□□□□ -0.73
NIFKP1-201ENST00000398317 CCDC127Q96BQ5 260 aa10.46□□□□□ -0.73
NIFKP1-201ENST00000398317 PCED1BQ96HM7 432 aa10.46□□□□□ -0.73
NIFKP1-201ENST00000398317 SPATA17Q96L03 361 aa10.46□□□□□ -0.73
NIFKP1-201ENST00000398317 LRRC27Q9C0I9 530 aa10.46□□□□□ -0.73
NIFKP1-201ENST00000398317 SNX25Q9H3E2 840 aa10.46□□□□□ -0.73
NIFKP1-201ENST00000398317 AGPAT3Q9NRZ7 376 aa10.46□□□□□ -0.73
NIFKP1-201ENST00000398317 RXFP3Q9NSD7 469 aa10.46□□□□□ -0.73
NIFKP1-201ENST00000398317 TRPM5Q9NZQ8 1165 aa10.46□□□□□ -0.73
NIFKP1-201ENST00000398317 ARHGAP26Q9UNA1 814 aa10.46□□□□□ -0.73
NIFKP1-201ENST00000398317 KMT2BQ9UMN6 2715 aaPredicted RBP10.45□□□□□ -0.74
NIFKP1-201ENST00000398317 CCDC163A0A0D9SF12 145 aa10.45□□□□□ -0.74
NIFKP1-201ENST00000398317 F8VP50 259 aa10.45□□□□□ -0.74
NIFKP1-201ENST00000398317 K7ELQ4 463 aaPredicted RBP10.45□□□□□ -0.74
NIFKP1-201ENST00000398317 LEFTY2O00292 366 aa10.45□□□□□ -0.74
NIFKP1-201ENST00000398317 CLDN5O00501 218 aa10.45□□□□□ -0.74
NIFKP1-201ENST00000398317 SCAMP3O14828 347 aaKnown RBP10.45□□□□□ -0.74
NIFKP1-201ENST00000398317 EIF3DO15371 548 aaKnown RBP eCLIP10.45□□□□□ -0.74
NIFKP1-201ENST00000398317 POLR2DO15514 142 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms