RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 SPPL3Q8TCT6 385 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 NOC3LQ8WTT2 800 aaKnown RBP4.05□□□□□ -1.76
UBE3A-202ENST00000397954 SLC22A17Q8WUG5 538 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 ELMO3Q96BJ8 720 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 ERP27Q96DN0 273 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 MSLNLQ96KJ4 702 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 SGCZQ96LD1 299 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 FBXL18Q96ME1 805 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 AIFM3Q96NN9 605 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 PPP1R10Q96QC0 940 aaKnown RBP4.05□□□□□ -1.76
UBE3A-202ENST00000397954 SEMA4AQ9H3S1 761 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 PDZD7Q9H5P4 517 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 DDX19AQ9NUU7 478 aaKnown RBP4.05□□□□□ -1.76
UBE3A-202ENST00000397954 CLIC5Q9NZA1 410 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 EPS15L1Q9UBC2 864 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 CDC23Q9UJX2 597 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 PIN4Q9Y237 131 aaKnown RBP4.05□□□□□ -1.76
UBE3A-202ENST00000397954 PLXND1Q9Y4D7 1925 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 A0A087WZ62 844 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 CXorf51AA0A1B0GTR3 108 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 LOC730098B7Z3J9 87 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 CBX4O00257 560 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 ZNF197O14709 1029 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 SMC2O95347 1197 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 CA3P07451 260 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 SLFN14P0C7P3 912 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 FAM157BP0CG42 384 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 P4HA1P13674 534 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 FGFR3P22607 806 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 RPL13P26373 211 aaKnown RBP4.05□□□□□ -1.76
UBE3A-202ENST00000397954 HOXA11P31270 313 aaPredicted RBP4.05□□□□□ -1.76
UBE3A-202ENST00000397954 GGCXP38435 758 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 TECP42680 631 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 MAPK9P45984 424 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 GPLD1P80108 840 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 STK38Q15208 465 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 PREPLQ4J6C6 727 aaPredicted RBP4.05□□□□□ -1.76
UBE3A-202ENST00000397954 WDR44Q5JSH3 913 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 ARMC3Q5W041 872 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 ANKRD54Q6NXT1 300 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 CC2D1AQ6P1N0 951 aaPredicted RBP4.05□□□□□ -1.76
UBE3A-202ENST00000397954 CHST15Q7LFX5 561 aaPredicted RBP4.05□□□□□ -1.76
UBE3A-202ENST00000397954 WDR49Q8IV35 697 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 DRC7Q8IY82 874 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 TOP6BLQ8N6T0 577 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 NECAB1Q8N987 351 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 TMEM161BQ8NDZ6 487 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 FAM13CQ8NE31 585 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 DNASE1L2Q92874 299 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 HPS1Q92902 700 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 IQCDQ96DY2 449 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 C1orf159Q96HA4 380 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 MRGPRX3Q96LB0 322 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 ACAP3Q96P50 834 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 GSDMAQ96QA5 445 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 CDK5RAP1Q96SZ6 601 aaKnown RBP4.05□□□□□ -1.76
UBE3A-202ENST00000397954 FDXACB1Q9BRP7 624 aaPredicted RBP4.05□□□□□ -1.76
UBE3A-202ENST00000397954 MMTAG2Q9BU76 263 aaKnown RBP4.05□□□□□ -1.76
UBE3A-202ENST00000397954 TRIM62Q9BVG3 475 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 UBE2ZQ9H832 354 aaPredicted RBP4.05□□□□□ -1.76
UBE3A-202ENST00000397954 TRPV4Q9HBA0 871 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 MRPL17Q9NRX2 175 aaKnown RBP4.05□□□□□ -1.76
UBE3A-202ENST00000397954 PKD2L1Q9P0L9 805 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 MTRRQ9UBK8 725 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 UXTQ9UBK9 157 aaPredicted RBP4.05□□□□□ -1.76
UBE3A-202ENST00000397954 NAGPAQ9UK23 515 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 HPSEQ9Y251 543 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 POLHQ9Y253 713 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 VWA8A3KMH1 1905 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 GREB1Q4ZG55 1949 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 PDXKO00764 312 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 IKBKBO14920 756 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 CALUO43852 315 aaPredicted RBP4.04□□□□□ -1.76
UBE3A-202ENST00000397954 EXTL3O43909 919 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 FGF18O76093 207 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 CAVIN2O95810 425 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 ODC1P11926 461 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 MARK3P27448 753 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 FLT3P36888 993 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 STAT6P42226 847 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 DPP6P42658 865 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 MAGEA11P43364 429 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 NPTX2P47972 431 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 CLCN3P51790 818 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 ZNF143P52747 638 aaPredicted RBP4.04□□□□□ -1.76
UBE3A-202ENST00000397954 EPHA5P54756 1037 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 ETF1P62495 437 aaKnown RBP4.04□□□□□ -1.76
UBE3A-202ENST00000397954 GUCY1A3Q02108 690 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 TNP2Q05952 138 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 LRRC63Q05C16 580 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 CYP4F3Q08477 520 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 MAPK7Q13164 816 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 UBAP2LQ14157 1087 aaKnown RBP4.04□□□□□ -1.76
UBE3A-202ENST00000397954 NKG7Q16617 165 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 BBS9Q3SYG4 887 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 HERC4Q5GLZ8 1057 aaPredicted RBP4.04□□□□□ -1.76
UBE3A-202ENST00000397954 CES5AQ6NT32 575 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 USP53Q70EK8 1073 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 OTOP3Q7RTS5 596 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 OTOP2Q7RTS6 562 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms