RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 PDE2AO00408 941 aaPredicted RBP20.43■□□□□ 0.86
PDLIM2-205ENST00000397761 TRIM66O15016 1216 aa20.43■□□□□ 0.86
PDLIM2-205ENST00000397761 CPB1P15086 417 aa20.43■□□□□ 0.86
PDLIM2-205ENST00000397761 PDGFRAP16234 1089 aa20.43■□□□□ 0.86
PDLIM2-205ENST00000397761 RABGGTBP53611 331 aa20.43■□□□□ 0.86
PDLIM2-205ENST00000397761 TAS2R40P59535 323 aa20.43■□□□□ 0.86
PDLIM2-205ENST00000397761 CKAP4Q07065 602 aaKnown RBP20.43■□□□□ 0.86
PDLIM2-205ENST00000397761 KIAA1841Q6NSI8 718 aa20.43■□□□□ 0.86
PDLIM2-205ENST00000397761 CC2D1AQ6P1N0 951 aaPredicted RBP20.43■□□□□ 0.86
PDLIM2-205ENST00000397761 RHOT1Q8IXI2 618 aa20.43■□□□□ 0.86
PDLIM2-205ENST00000397761 CEP112Q8N8E3 955 aa20.43■□□□□ 0.86
PDLIM2-205ENST00000397761 MYRIPQ8NFW9 859 aa20.43■□□□□ 0.86
PDLIM2-205ENST00000397761 ACTRT1Q8TDG2 376 aa20.43■□□□□ 0.86
PDLIM2-205ENST00000397761 CLSTN3Q9BQT9 956 aa20.43■□□□□ 0.86
PDLIM2-205ENST00000397761 CARD6Q9BX69 1037 aa20.43■□□□□ 0.86
PDLIM2-205ENST00000397761 HSFX1Q9UBD0 423 aa20.43■□□□□ 0.86
PDLIM2-205ENST00000397761 TRIOBPQ9H2D6 2365 aa20.42■□□□□ 0.86
PDLIM2-205ENST00000397761 WDR27A2RRH5 827 aa20.42■□□□□ 0.86
PDLIM2-205ENST00000397761 H0YGN5 161 aa20.42■□□□□ 0.86
PDLIM2-205ENST00000397761 ADAM12O43184 909 aa20.42■□□□□ 0.86
PDLIM2-205ENST00000397761 TLL1O43897 1013 aa20.42■□□□□ 0.86
PDLIM2-205ENST00000397761 LILRB3O75022 631 aa20.42■□□□□ 0.86
PDLIM2-205ENST00000397761 LRCH4O75427 683 aa20.42■□□□□ 0.86
PDLIM2-205ENST00000397761 DAB1O75553 588 aa20.42■□□□□ 0.86
PDLIM2-205ENST00000397761 GRAP2O75791 330 aa20.42■□□□□ 0.86
PDLIM2-205ENST00000397761 FGF18O76093 207 aa20.42■□□□□ 0.86
PDLIM2-205ENST00000397761 ZBED1O96006 694 aa20.42■□□□□ 0.86
PDLIM2-205ENST00000397761 PCK1P35558 622 aa20.42■□□□□ 0.86
PDLIM2-205ENST00000397761 GRIK1P39086 918 aa20.42■□□□□ 0.86
PDLIM2-205ENST00000397761 DNA2P51530 1060 aa20.42■□□□□ 0.86
PDLIM2-205ENST00000397761 RNASE9P60153 205 aaKnown RBP20.42■□□□□ 0.86
PDLIM2-205ENST00000397761 YWHAZP63104 245 aaKnown RBP20.42■□□□□ 0.86
PDLIM2-205ENST00000397761 ROR1Q01973 937 aa20.42■□□□□ 0.86
PDLIM2-205ENST00000397761 ITIH3Q06033 890 aa20.42■□□□□ 0.86
PDLIM2-205ENST00000397761 CCDC14Q49A88 953 aa20.42■□□□□ 0.86
PDLIM2-205ENST00000397761 DAB2IPQ5VWQ8 1189 aa20.42■□□□□ 0.86
PDLIM2-205ENST00000397761 RNF19BQ6ZMZ0 732 aa20.42■□□□□ 0.86
PDLIM2-205ENST00000397761 POLNQ7Z5Q5 900 aa20.42■□□□□ 0.86
PDLIM2-205ENST00000397761 ATAD1Q8NBU5 361 aa20.42■□□□□ 0.86
PDLIM2-205ENST00000397761 CENPIQ92674 756 aaPredicted RBP20.42■□□□□ 0.86
PDLIM2-205ENST00000397761 NT5C3BQ969T7 300 aa20.42■□□□□ 0.86
PDLIM2-205ENST00000397761 CAPZA3Q96KX2 299 aa20.42■□□□□ 0.86
PDLIM2-205ENST00000397761 SLC2A13Q96QE2 648 aa20.42■□□□□ 0.86
PDLIM2-205ENST00000397761 DDX23Q9BUQ8 820 aaKnown RBP20.42■□□□□ 0.86
PDLIM2-205ENST00000397761 IL37Q9NZH6 218 aa20.42■□□□□ 0.86
PDLIM2-205ENST00000397761 NR2E3Q9Y5X4 410 aa20.42■□□□□ 0.86
PDLIM2-205ENST00000397761 LCHNA4D1U4 455 aa20.41■□□□□ 0.86
PDLIM2-205ENST00000397761 ABLIM3O94929 683 aa20.41■□□□□ 0.86
PDLIM2-205ENST00000397761 HAPLN1P10915 354 aaPredicted RBP20.41■□□□□ 0.86
PDLIM2-205ENST00000397761 SDC4P31431 198 aa20.41■□□□□ 0.86
PDLIM2-205ENST00000397761 MATKP42679 507 aa20.41■□□□□ 0.86
PDLIM2-205ENST00000397761 RWDD2BP57060 319 aa20.41■□□□□ 0.86
PDLIM2-205ENST00000397761 SLC25A11Q02978 314 aaKnown RBP20.41■□□□□ 0.86
PDLIM2-205ENST00000397761 KRT17Q04695 432 aa20.41■□□□□ 0.86
PDLIM2-205ENST00000397761 KATNAL2Q8IYT4 538 aa20.41■□□□□ 0.86
PDLIM2-205ENST00000397761 VPS52Q8N1B4 723 aa20.41■□□□□ 0.86
PDLIM2-205ENST00000397761 MNS1Q8NEH6 495 aa20.41■□□□□ 0.86
PDLIM2-205ENST00000397761 CEP295NLQ96MC4 621 aa20.41■□□□□ 0.86
PDLIM2-205ENST00000397761 PGLYRP2Q96PD5 576 aa20.41■□□□□ 0.86
PDLIM2-205ENST00000397761 ZBP1Q9H171 429 aa20.41■□□□□ 0.86
PDLIM2-205ENST00000397761 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.41■□□□□ 0.86
PDLIM2-205ENST00000397761 RANBP2P49792 3224 aaKnown RBP20.4■□□□□ 0.86
PDLIM2-205ENST00000397761 YJEFN3A6XGL0 299 aa20.4■□□□□ 0.86
PDLIM2-205ENST00000397761 E7ENQ6 273 aa20.4■□□□□ 0.86
PDLIM2-205ENST00000397761 URODP06132 367 aa20.4■□□□□ 0.86
PDLIM2-205ENST00000397761 FYNP06241 537 aa20.4■□□□□ 0.86
PDLIM2-205ENST00000397761 TCF4P15884 667 aa20.4■□□□□ 0.86
PDLIM2-205ENST00000397761 OR1D2P34982 312 aa20.4■□□□□ 0.86
PDLIM2-205ENST00000397761 GTF2F1P35269 517 aaKnown RBP eCLIP20.4■□□□□ 0.86
PDLIM2-205ENST00000397761 MAGEA10P43363 369 aaPredicted RBP20.4■□□□□ 0.86
PDLIM2-205ENST00000397761 TPGS2Q68CL5 300 aa20.4■□□□□ 0.86
PDLIM2-205ENST00000397761 BEND5Q7L4P6 421 aa20.4■□□□□ 0.86
PDLIM2-205ENST00000397761 BNIPLQ7Z465 357 aa20.4■□□□□ 0.86
PDLIM2-205ENST00000397761 TTC9BQ8N6N2 239 aa20.4■□□□□ 0.86
PDLIM2-205ENST00000397761 LRRN4CLQ8ND94 238 aa20.4■□□□□ 0.86
PDLIM2-205ENST00000397761 ZNF461Q8TAF7 563 aa20.4■□□□□ 0.86
PDLIM2-205ENST00000397761 NDRG1Q92597 394 aaKnown RBP20.4■□□□□ 0.86
PDLIM2-205ENST00000397761 RPGRIP1Q96KN7 1286 aa20.4■□□□□ 0.86
PDLIM2-205ENST00000397761 SPATA17Q96L03 361 aa20.4■□□□□ 0.86
PDLIM2-205ENST00000397761 NCAPGQ9BPX3 1015 aa20.4■□□□□ 0.86
PDLIM2-205ENST00000397761 PLVAPQ9BX97 442 aa20.4■□□□□ 0.86
PDLIM2-205ENST00000397761 CRISPLD1Q9H336 500 aa20.4■□□□□ 0.86
PDLIM2-205ENST00000397761 POPDC2Q9HBU9 364 aa20.4■□□□□ 0.86
PDLIM2-205ENST00000397761 RXFP1Q9HBX9 757 aa20.4■□□□□ 0.86
PDLIM2-205ENST00000397761 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.4■□□□□ 0.86
PDLIM2-205ENST00000397761 FNIP2Q9P278 1114 aa20.4■□□□□ 0.86
PDLIM2-205ENST00000397761 AFF4Q9UHB7 1163 aaKnown RBP20.4■□□□□ 0.86
PDLIM2-205ENST00000397761 LZTS1Q9Y250 596 aa20.4■□□□□ 0.86
PDLIM2-205ENST00000397761 USTQ9Y2C2 406 aa20.4■□□□□ 0.86
PDLIM2-205ENST00000397761 RWDD3Q9Y3V2 267 aa20.4■□□□□ 0.86
PDLIM2-205ENST00000397761 LAMA2P24043 3122 aaKnown RBP20.4■□□□□ 0.86
PDLIM2-205ENST00000397761 FAM92AA1XBS5 289 aa20.39■□□□□ 0.85
PDLIM2-205ENST00000397761 TADA3O75528 432 aa20.39■□□□□ 0.85
PDLIM2-205ENST00000397761 RNF8O76064 485 aa20.39■□□□□ 0.85
PDLIM2-205ENST00000397761 USP17L7P0C7H9 530 aa20.39■□□□□ 0.85
PDLIM2-205ENST00000397761 CTSAP10619 480 aa20.39■□□□□ 0.85
PDLIM2-205ENST00000397761 RPL17P18621 184 aaKnown RBP20.39■□□□□ 0.85
PDLIM2-205ENST00000397761 BMPR1AP36894 532 aa20.39■□□□□ 0.85
PDLIM2-205ENST00000397761 SLC5A3P53794 718 aa20.39■□□□□ 0.85
PDLIM2-205ENST00000397761 ARPP19P56211 112 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms