RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 ATP1A3P13637 1013 aa26.74■■□□□ 1.87
TSPAN4-207ENST00000397411 KIF11P52732 1056 aa26.74■■□□□ 1.87
TSPAN4-207ENST00000397411 PTK2Q05397 1052 aa26.74■■□□□ 1.87
TSPAN4-207ENST00000397411 CC2D1AQ6P1N0 951 aaPredicted RBP26.74■■□□□ 1.87
TSPAN4-207ENST00000397411 SHC3Q92529 594 aa26.74■■□□□ 1.87
TSPAN4-207ENST00000397411 IRF7Q92985 503 aa26.74■■□□□ 1.87
TSPAN4-207ENST00000397411 USP13Q92995 863 aaPredicted RBP26.74■■□□□ 1.87
TSPAN4-207ENST00000397411 RSPRY1Q96DX4 576 aa26.74■■□□□ 1.87
TSPAN4-207ENST00000397411 KIF9Q9HAQ2 790 aa26.74■■□□□ 1.87
TSPAN4-207ENST00000397411 CBX8Q9HC52 389 aa26.74■■□□□ 1.87
TSPAN4-207ENST00000397411 WDR3Q9UNX4 943 aaKnown RBP eCLIP26.74■■□□□ 1.87
TSPAN4-207ENST00000397411 FOXN3O00409 490 aaPredicted RBP26.73■■□□□ 1.87
TSPAN4-207ENST00000397411 DRAP1Q14919 205 aaPredicted RBP26.73■■□□□ 1.87
TSPAN4-207ENST00000397411 IQCB1Q15051 598 aa26.73■■□□□ 1.87
TSPAN4-207ENST00000397411 SIX5Q8N196 739 aa26.73■■□□□ 1.87
TSPAN4-207ENST00000397411 SLC22A12Q96S37 553 aa26.73■■□□□ 1.87
TSPAN4-207ENST00000397411 HSD3B7Q9H2F3 369 aa26.73■■□□□ 1.87
TSPAN4-207ENST00000397411 PLCB1Q9NQ66 1216 aa26.73■■□□□ 1.87
TSPAN4-207ENST00000397411 NCANO14594 1321 aa26.72■■□□□ 1.87
TSPAN4-207ENST00000397411 FAM92AA1XBS5 289 aa26.72■■□□□ 1.87
TSPAN4-207ENST00000397411 CYP26A1O43174 497 aa26.72■■□□□ 1.87
TSPAN4-207ENST00000397411 MBL2P11226 248 aaPredicted RBP26.72■■□□□ 1.87
TSPAN4-207ENST00000397411 UCHL3P15374 230 aa26.72■■□□□ 1.87
TSPAN4-207ENST00000397411 BPIFB4P59827 614 aa26.72■■□□□ 1.87
TSPAN4-207ENST00000397411 ZNF268Q14587 947 aaPredicted RBP26.72■■□□□ 1.87
TSPAN4-207ENST00000397411 SYCP1Q15431 976 aa26.72■■□□□ 1.87
TSPAN4-207ENST00000397411 ARHGAP29Q52LW3 1261 aa26.72■■□□□ 1.87
TSPAN4-207ENST00000397411 SIX6OS1Q8N1H7 587 aa26.72■■□□□ 1.87
TSPAN4-207ENST00000397411 CSGALNACT1Q8TDX6 532 aa26.72■■□□□ 1.87
TSPAN4-207ENST00000397411 ZNF606Q8WXB4 792 aa26.72■■□□□ 1.87
TSPAN4-207ENST00000397411 SECISBP2LQ93073 1101 aaKnown RBP26.72■■□□□ 1.87
TSPAN4-207ENST00000397411 FAM207AQ9NSI2 230 aaPredicted RBP26.72■■□□□ 1.87
TSPAN4-207ENST00000397411 AJAP1Q9UKB5 411 aaPredicted RBP26.72■■□□□ 1.87
TSPAN4-207ENST00000397411 CCL26Q9Y258 94 aa26.72■■□□□ 1.87
TSPAN4-207ENST00000397411 FHOD1Q9Y613 1164 aa26.72■■□□□ 1.87
TSPAN4-207ENST00000397411 MYO16Q9Y6X6 1858 aa26.72■■□□□ 1.87
TSPAN4-207ENST00000397411 PATJQ8NI35 1801 aa26.72■■□□□ 1.87
TSPAN4-207ENST00000397411 SERPINC1P01008 464 aa26.71■■□□□ 1.87
TSPAN4-207ENST00000397411 TKTL1P51854 596 aa26.71■■□□□ 1.87
TSPAN4-207ENST00000397411 SLC44A4Q53GD3 710 aa26.71■■□□□ 1.87
TSPAN4-207ENST00000397411 SMYD5Q6GMV2 418 aa26.71■■□□□ 1.87
TSPAN4-207ENST00000397411 NEK11Q8NG66 645 aa26.71■■□□□ 1.87
TSPAN4-207ENST00000397411 ASIC4Q96FT7 647 aa26.71■■□□□ 1.87
TSPAN4-207ENST00000397411 ZSWIM1Q9BR11 485 aa26.71■■□□□ 1.87
TSPAN4-207ENST00000397411 RNF38Q9H0F5 515 aa26.71■■□□□ 1.87
TSPAN4-207ENST00000397411 NAGPAQ9UK23 515 aa26.71■■□□□ 1.87
TSPAN4-207ENST00000397411 TECTAO75443 2155 aa26.7■■□□□ 1.87
TSPAN4-207ENST00000397411 PRR33A8MZF0 331 aa26.7■■□□□ 1.86
TSPAN4-207ENST00000397411 TULP2O00295 520 aa26.7■■□□□ 1.86
TSPAN4-207ENST00000397411 CHADO15335 359 aa26.7■■□□□ 1.86
TSPAN4-207ENST00000397411 LCP1P13796 627 aa26.7■■□□□ 1.86
TSPAN4-207ENST00000397411 RGS7P49802 495 aa26.7■■□□□ 1.86
TSPAN4-207ENST00000397411 KLK7P49862 253 aa26.7■■□□□ 1.86
TSPAN4-207ENST00000397411 POLR2FP61218 127 aaKnown RBP26.7■■□□□ 1.86
TSPAN4-207ENST00000397411 SNX30Q5VWJ9 437 aa26.7■■□□□ 1.86
TSPAN4-207ENST00000397411 DPY19L2P1Q6NXN4 242 aa26.7■■□□□ 1.86
TSPAN4-207ENST00000397411 LUZP1Q86V48 1076 aa26.7■■□□□ 1.86
TSPAN4-207ENST00000397411 ARHGAP18Q8N392 663 aa26.7■■□□□ 1.86
TSPAN4-207ENST00000397411 FLCNQ8NFG4 579 aa26.7■■□□□ 1.86
TSPAN4-207ENST00000397411 SH3RF2Q8TEC5 729 aa26.7■■□□□ 1.86
TSPAN4-207ENST00000397411 SHDQ96IW2 340 aa26.7■■□□□ 1.86
TSPAN4-207ENST00000397411 LRRC3BQ96PB8 259 aa26.7■■□□□ 1.86
TSPAN4-207ENST00000397411 STK33Q9BYT3 514 aa26.7■■□□□ 1.86
TSPAN4-207ENST00000397411 PDCL3Q9H2J4 239 aa26.7■■□□□ 1.86
TSPAN4-207ENST00000397411 ARHGAP26Q9UNA1 814 aa26.7■■□□□ 1.86
TSPAN4-207ENST00000397411 A0A1W2PQH9 124 aa26.69■■□□□ 1.86
TSPAN4-207ENST00000397411 ZBED1O96006 694 aa26.69■■□□□ 1.86
TSPAN4-207ENST00000397411 OAS1P00973 400 aaKnown RBP26.69■■□□□ 1.86
TSPAN4-207ENST00000397411 ZDHHC11BP0C7U3 371 aa26.69■■□□□ 1.86
TSPAN4-207ENST00000397411 RALAP11233 206 aa26.69■■□□□ 1.86
TSPAN4-207ENST00000397411 KRT9P35527 623 aa26.69■■□□□ 1.86
TSPAN4-207ENST00000397411 PLA2G4AP47712 749 aa26.69■■□□□ 1.86
TSPAN4-207ENST00000397411 PSEN1P49768 467 aa26.69■■□□□ 1.86
TSPAN4-207ENST00000397411 PLCB2Q00722 1185 aa26.69■■□□□ 1.86
TSPAN4-207ENST00000397411 FCHO2Q0JRZ9 810 aa26.69■■□□□ 1.86
TSPAN4-207ENST00000397411 CCDC186Q7Z3E2 898 aa26.69■■□□□ 1.86
TSPAN4-207ENST00000397411 SUGP1Q8IWZ8 645 aaKnown RBP26.69■■□□□ 1.86
TSPAN4-207ENST00000397411 DNASE1L2Q92874 299 aa26.69■■□□□ 1.86
TSPAN4-207ENST00000397411 LRFN3Q9BTN0 628 aa26.69■■□□□ 1.86
TSPAN4-207ENST00000397411 CCSER2Q9H7U1 834 aa26.69■■□□□ 1.86
TSPAN4-207ENST00000397411 ACP6Q9NPH0 428 aa26.69■■□□□ 1.86
TSPAN4-207ENST00000397411 C11orf16Q9NQ32 467 aa26.69■■□□□ 1.86
TSPAN4-207ENST00000397411 ARHGEF3Q9NR81 526 aa26.69■■□□□ 1.86
TSPAN4-207ENST00000397411 GKN1Q9NS71 199 aa26.69■■□□□ 1.86
TSPAN4-207ENST00000397411 SMPD4Q9NXE4 827 aa26.69■■□□□ 1.86
TSPAN4-207ENST00000397411 CPQQ9Y646 472 aa26.69■■□□□ 1.86
TSPAN4-207ENST00000397411 USP3Q9Y6I4 520 aa26.69■■□□□ 1.86
TSPAN4-207ENST00000397411 COCHO43405 550 aa26.68■■□□□ 1.86
TSPAN4-207ENST00000397411 TLR5O60602 858 aa26.68■■□□□ 1.86
TSPAN4-207ENST00000397411 PNMA6AP0CW24 399 aaPredicted RBP26.68■■□□□ 1.86
TSPAN4-207ENST00000397411 RARGP13631 454 aa26.68■■□□□ 1.86
TSPAN4-207ENST00000397411 TUBP50607 506 aa26.68■■□□□ 1.86
TSPAN4-207ENST00000397411 SLC7A9P82251 487 aa26.68■■□□□ 1.86
TSPAN4-207ENST00000397411 ADIGQ0VDE8 80 aa26.68■■□□□ 1.86
TSPAN4-207ENST00000397411 PKDCCQ504Y2 493 aa26.68■■□□□ 1.86
TSPAN4-207ENST00000397411 RAB41Q5JT25 222 aa26.68■■□□□ 1.86
TSPAN4-207ENST00000397411 DENND1BQ6P3S1 775 aa26.68■■□□□ 1.86
TSPAN4-207ENST00000397411 HFE2Q6ZVN8 426 aa26.68■■□□□ 1.86
TSPAN4-207ENST00000397411 BMP8AQ7Z5Y6 402 aa26.68■■□□□ 1.86
TSPAN4-207ENST00000397411 TADA2BQ86TJ2 420 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms