RNA–Protein interactions for RNA: ENST00000396655.6

NDUFA9-202, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 1 (best)

Gene NDUFA9, Length 1,037 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-202ENST00000396655 DDX42Q86XP3 938 aaKnown RBP eCLIP11.74□□□□□ -0.53
NDUFA9-202ENST00000396655 ARL14EPQ8N8R7 260 aaPredicted RBP11.74□□□□□ -0.53
NDUFA9-202ENST00000396655 ZMIZ2Q8NF64 920 aa11.74□□□□□ -0.53
NDUFA9-202ENST00000396655 OSCP1Q8WVF1 389 aa11.74□□□□□ -0.53
NDUFA9-202ENST00000396655 JAKMIP2Q96AA8 810 aa11.74□□□□□ -0.53
NDUFA9-202ENST00000396655 ELMO3Q96BJ8 720 aa11.74□□□□□ -0.53
NDUFA9-202ENST00000396655 TMEM176AQ96HP8 235 aa11.74□□□□□ -0.53
NDUFA9-202ENST00000396655 SLC22A12Q96S37 553 aa11.74□□□□□ -0.53
NDUFA9-202ENST00000396655 SMOQ99835 787 aa11.74□□□□□ -0.53
NDUFA9-202ENST00000396655 DUSP16Q9BY84 665 aa11.74□□□□□ -0.53
NDUFA9-202ENST00000396655 FAM126AQ9BYI3 521 aaPredicted RBP11.74□□□□□ -0.53
NDUFA9-202ENST00000396655 SMG9Q9H0W8 520 aaKnown RBP11.74□□□□□ -0.53
NDUFA9-202ENST00000396655 CHRDQ9H2X0 955 aa11.74□□□□□ -0.53
NDUFA9-202ENST00000396655 CLSTN2Q9H4D0 955 aa11.74□□□□□ -0.53
NDUFA9-202ENST00000396655 TRPC7Q9HCX4 862 aa11.74□□□□□ -0.53
NDUFA9-202ENST00000396655 KRT82Q9NSB4 513 aa11.74□□□□□ -0.53
NDUFA9-202ENST00000396655 GTSE1Q9NYZ3 720 aa11.74□□□□□ -0.53
NDUFA9-202ENST00000396655 HMGXB4Q9UGU5 601 aa11.74□□□□□ -0.53
NDUFA9-202ENST00000396655 TPRP12270 2363 aaKnown RBP11.74□□□□□ -0.53
NDUFA9-202ENST00000396655 SLC9A3R1O14745 358 aaPredicted RBP11.73□□□□□ -0.53
NDUFA9-202ENST00000396655 LRRN2O75325 713 aa11.73□□□□□ -0.53
NDUFA9-202ENST00000396655 CCDC192P0DO97 292 aa11.73□□□□□ -0.53
NDUFA9-202ENST00000396655 CHRNB1P11230 501 aa11.73□□□□□ -0.53
NDUFA9-202ENST00000396655 CCDC130P13994 396 aa11.73□□□□□ -0.53
NDUFA9-202ENST00000396655 CD58P19256 250 aa11.73□□□□□ -0.53
NDUFA9-202ENST00000396655 RAD23BP54727 409 aa11.73□□□□□ -0.53
NDUFA9-202ENST00000396655 MAP3K7CLP57077 242 aa11.73□□□□□ -0.53
NDUFA9-202ENST00000396655 SLC8A3P57103 927 aa11.73□□□□□ -0.53
NDUFA9-202ENST00000396655 FOXK2Q01167 660 aa11.73□□□□□ -0.53
NDUFA9-202ENST00000396655 NR1H3Q13133 447 aa11.73□□□□□ -0.53
NDUFA9-202ENST00000396655 LRRC32Q14392 662 aa11.73□□□□□ -0.53
NDUFA9-202ENST00000396655 MTF1Q14872 753 aa11.73□□□□□ -0.53
NDUFA9-202ENST00000396655 CAMK4Q16566 473 aa11.73□□□□□ -0.53
NDUFA9-202ENST00000396655 HECTD3Q5T447 861 aa11.73□□□□□ -0.53
NDUFA9-202ENST00000396655 ARHGAP17Q68EM7 881 aa11.73□□□□□ -0.53
NDUFA9-202ENST00000396655 CLEC20AQ6ZU45 233 aa11.73□□□□□ -0.53
NDUFA9-202ENST00000396655 GPIHBP1Q8IV16 184 aa11.73□□□□□ -0.53
NDUFA9-202ENST00000396655 ANKRD52Q8NB46 1076 aa11.73□□□□□ -0.53
NDUFA9-202ENST00000396655 SLC4A11Q8NBS3 891 aa11.73□□□□□ -0.53
NDUFA9-202ENST00000396655 SCAMP5Q8TAC9 235 aa11.73□□□□□ -0.53
NDUFA9-202ENST00000396655 SH3RF2Q8TEC5 729 aa11.73□□□□□ -0.53
NDUFA9-202ENST00000396655 TATDN2Q93075 761 aa11.73□□□□□ -0.53
NDUFA9-202ENST00000396655 ATP2A3Q93084 1043 aa11.73□□□□□ -0.53
NDUFA9-202ENST00000396655 FBXO32Q969P5 355 aa11.73□□□□□ -0.53
NDUFA9-202ENST00000396655 HEXIM2Q96MH2 286 aaKnown RBP11.73□□□□□ -0.53
NDUFA9-202ENST00000396655 TWNKQ96RR1 684 aa11.73□□□□□ -0.53
NDUFA9-202ENST00000396655 SRRTQ9BXP5 876 aaKnown RBP11.73□□□□□ -0.53
NDUFA9-202ENST00000396655 RNF38Q9H0F5 515 aa11.73□□□□□ -0.53
NDUFA9-202ENST00000396655 TLR8Q9NR97 1041 aaKnown RBP11.73□□□□□ -0.53
NDUFA9-202ENST00000396655 SCML2Q9UQR0 700 aa11.73□□□□□ -0.53
NDUFA9-202ENST00000396655 E2F8A0AVK6 867 aa11.72□□□□□ -0.53
NDUFA9-202ENST00000396655 HHLA1C9JL84 531 aa11.72□□□□□ -0.53
NDUFA9-202ENST00000396655 TRDMT1O14717 391 aaKnown RBP11.72□□□□□ -0.53
NDUFA9-202ENST00000396655 LAMTOR5O43504 91 aa11.72□□□□□ -0.53
NDUFA9-202ENST00000396655 BEST1O76090 585 aa11.72□□□□□ -0.53
NDUFA9-202ENST00000396655 ERCC5P28715 1186 aaPredicted RBP11.72□□□□□ -0.53
NDUFA9-202ENST00000396655 GCNT1Q02742 428 aa11.72□□□□□ -0.53
NDUFA9-202ENST00000396655 TNK2Q07912 1038 aa11.72□□□□□ -0.53
NDUFA9-202ENST00000396655 KCNH2Q12809 1159 aa11.72□□□□□ -0.53
NDUFA9-202ENST00000396655 PPP2R5DQ14738 602 aa11.72□□□□□ -0.53
NDUFA9-202ENST00000396655 PPP1R26Q5T8A7 1209 aaPredicted RBP11.72□□□□□ -0.53
NDUFA9-202ENST00000396655 KLHDC10Q6PID8 442 aa11.72□□□□□ -0.53
NDUFA9-202ENST00000396655 ZC3H14Q6PJT7 736 aaKnown RBP11.72□□□□□ -0.53
NDUFA9-202ENST00000396655 CCDC186Q7Z3E2 898 aa11.72□□□□□ -0.53
NDUFA9-202ENST00000396655 CPA6Q8N4T0 437 aa11.72□□□□□ -0.53
NDUFA9-202ENST00000396655 EHBP1Q8NDI1 1231 aa11.72□□□□□ -0.53
NDUFA9-202ENST00000396655 LMO3Q8TAP4 145 aa11.72□□□□□ -0.53
NDUFA9-202ENST00000396655 OTUB2Q96DC9 234 aa11.72□□□□□ -0.53
NDUFA9-202ENST00000396655 ZFYVE19Q96K21 471 aa11.72□□□□□ -0.53
NDUFA9-202ENST00000396655 FAM81BQ96LP2 452 aa11.72□□□□□ -0.53
NDUFA9-202ENST00000396655 NT5C1BQ96P26 610 aa11.72□□□□□ -0.53
NDUFA9-202ENST00000396655 GBP4Q96PP9 640 aa11.72□□□□□ -0.53
NDUFA9-202ENST00000396655 LMAN1LQ9HAT1 526 aa11.72□□□□□ -0.53
NDUFA9-202ENST00000396655 CYLDQ9NQC7 956 aa11.72□□□□□ -0.53
NDUFA9-202ENST00000396655 HPS4Q9NQG7 708 aa11.72□□□□□ -0.53
NDUFA9-202ENST00000396655 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.72□□□□□ -0.53
NDUFA9-202ENST00000396655 FAM49BQ9NUQ9 324 aa11.72□□□□□ -0.53
NDUFA9-202ENST00000396655 DUS2Q9NX74 493 aaKnown RBP11.72□□□□□ -0.53
NDUFA9-202ENST00000396655 TBC1D14Q9P2M4 693 aa11.72□□□□□ -0.53
NDUFA9-202ENST00000396655 CHORDC1Q9UHD1 332 aaPredicted RBP11.72□□□□□ -0.53
NDUFA9-202ENST00000396655 CTNND2Q9UQB3 1225 aa11.72□□□□□ -0.53
NDUFA9-202ENST00000396655 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.72□□□□□ -0.53
NDUFA9-202ENST00000396655 USP3Q9Y6I4 520 aa11.72□□□□□ -0.53
NDUFA9-202ENST00000396655 FRYLO94915 3013 aa11.72□□□□□ -0.53
NDUFA9-202ENST00000396655 ZNF292O60281 2723 aa11.72□□□□□ -0.53
NDUFA9-202ENST00000396655 EP300Q09472 2414 aaPredicted RBP11.71□□□□□ -0.53
NDUFA9-202ENST00000396655 DMXL1Q9Y485 3027 aa11.71□□□□□ -0.53
NDUFA9-202ENST00000396655 FANCMQ8IYD8 2048 aa11.71□□□□□ -0.53
NDUFA9-202ENST00000396655 HELZP42694 1942 aaKnown RBP11.71□□□□□ -0.53
NDUFA9-202ENST00000396655 LEFTY2O00292 366 aa11.71□□□□□ -0.53
NDUFA9-202ENST00000396655 PAPSS2O95340 614 aaPredicted RBP11.71□□□□□ -0.53
NDUFA9-202ENST00000396655 NFATC1O95644 943 aa11.71□□□□□ -0.53
NDUFA9-202ENST00000396655 AFPP02771 609 aaKnown RBP11.71□□□□□ -0.53
NDUFA9-202ENST00000396655 PAEPP09466 180 aa11.71□□□□□ -0.53
NDUFA9-202ENST00000396655 IFNAR2P48551 515 aa11.71□□□□□ -0.53
NDUFA9-202ENST00000396655 KIF11P52732 1056 aa11.71□□□□□ -0.53
NDUFA9-202ENST00000396655 NRLP54845 237 aa11.71□□□□□ -0.53
NDUFA9-202ENST00000396655 ZXDBP98169 803 aa11.71□□□□□ -0.53
NDUFA9-202ENST00000396655 ORC1Q13415 861 aa11.71□□□□□ -0.53
NDUFA9-202ENST00000396655 CCINQ13939 588 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms