RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 RWDD3Q9Y3V2 267 aa21.41■■□□□ 1.02
VCPKMT-202ENST00000395860 PCDHA3Q9Y5H8 950 aa21.41■■□□□ 1.02
VCPKMT-202ENST00000395860 ZBED1O96006 694 aa21.41■■□□□ 1.02
VCPKMT-202ENST00000395860 DESP17661 470 aa21.41■■□□□ 1.02
VCPKMT-202ENST00000395860 SDC4P31431 198 aa21.41■■□□□ 1.02
VCPKMT-202ENST00000395860 ACAP1Q15027 740 aa21.41■■□□□ 1.02
VCPKMT-202ENST00000395860 SHHQ15465 462 aa21.41■■□□□ 1.02
VCPKMT-202ENST00000395860 MGAT5BQ3V5L5 792 aa21.41■■□□□ 1.02
VCPKMT-202ENST00000395860 TNS4Q8IZW8 715 aa21.41■■□□□ 1.02
VCPKMT-202ENST00000395860 TTC9BQ8N6N2 239 aa21.41■■□□□ 1.02
VCPKMT-202ENST00000395860 SLC27A5Q9Y2P5 690 aa21.41■■□□□ 1.02
VCPKMT-202ENST00000395860 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.41■■□□□ 1.02
VCPKMT-202ENST00000395860 CES2O00748 559 aa21.4■■□□□ 1.02
VCPKMT-202ENST00000395860 RNF8O76064 485 aa21.4■■□□□ 1.02
VCPKMT-202ENST00000395860 VNN2O95498 520 aa21.4■■□□□ 1.02
VCPKMT-202ENST00000395860 GLI1P08151 1106 aa21.4■■□□□ 1.02
VCPKMT-202ENST00000395860 BMPR1AP36894 532 aa21.4■■□□□ 1.02
VCPKMT-202ENST00000395860 MARCKSL1P49006 195 aa21.4■■□□□ 1.02
VCPKMT-202ENST00000395860 GPR15P49685 360 aa21.4■■□□□ 1.02
VCPKMT-202ENST00000395860 SLC5A3P53794 718 aa21.4■■□□□ 1.02
VCPKMT-202ENST00000395860 TAS2R40P59535 323 aa21.4■■□□□ 1.02
VCPKMT-202ENST00000395860 YWHAZP63104 245 aaKnown RBP21.4■■□□□ 1.02
VCPKMT-202ENST00000395860 IFRD2Q12894 506 aaPredicted RBP21.4■■□□□ 1.02
VCPKMT-202ENST00000395860 DDR2Q16832 855 aa21.4■■□□□ 1.02
VCPKMT-202ENST00000395860 CCDC181Q5TID7 509 aa21.4■■□□□ 1.02
VCPKMT-202ENST00000395860 RHOT1Q8IXI2 618 aa21.4■■□□□ 1.02
VCPKMT-202ENST00000395860 AUTS2Q8WXX7 1259 aa21.4■■□□□ 1.02
VCPKMT-202ENST00000395860 CFAP57Q96MR6 1250 aa21.4■■□□□ 1.02
VCPKMT-202ENST00000395860 SEPT5Q99719 369 aaPredicted RBP21.4■■□□□ 1.02
VCPKMT-202ENST00000395860 CNPY3Q9BT09 278 aa21.4■■□□□ 1.02
VCPKMT-202ENST00000395860 CARD6Q9BX69 1037 aa21.4■■□□□ 1.02
VCPKMT-202ENST00000395860 ZBP1Q9H171 429 aa21.4■■□□□ 1.02
VCPKMT-202ENST00000395860 SSX2IPQ9Y2D8 614 aa21.4■■□□□ 1.02
VCPKMT-202ENST00000395860 LINC01553A4QN01 128 aa21.39■■□□□ 1.01
VCPKMT-202ENST00000395860 DPYSL4O14531 572 aa21.39■■□□□ 1.01
VCPKMT-202ENST00000395860 PSTPIP1O43586 416 aa21.39■■□□□ 1.01
VCPKMT-202ENST00000395860 HAPLN1P10915 354 aaPredicted RBP21.39■■□□□ 1.01
VCPKMT-202ENST00000395860 CA8P35219 290 aa21.39■■□□□ 1.01
VCPKMT-202ENST00000395860 PEX5P50542 639 aa21.39■■□□□ 1.01
VCPKMT-202ENST00000395860 DUSP4Q13115 394 aa21.39■■□□□ 1.01
VCPKMT-202ENST00000395860 SDHAF4Q5VUM1 108 aa21.39■■□□□ 1.01
VCPKMT-202ENST00000395860 CREG2Q8IUH2 290 aa21.39■■□□□ 1.01
VCPKMT-202ENST00000395860 GPR65Q8IYL9 337 aa21.39■■□□□ 1.01
VCPKMT-202ENST00000395860 SCML4Q8N228 414 aa21.39■■□□□ 1.01
VCPKMT-202ENST00000395860 SCAMP5Q8TAC9 235 aa21.39■■□□□ 1.01
VCPKMT-202ENST00000395860 ALG3Q92685 438 aa21.39■■□□□ 1.01
VCPKMT-202ENST00000395860 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.39■■□□□ 1.01
VCPKMT-202ENST00000395860 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.39■■□□□ 1.01
VCPKMT-202ENST00000395860 USP3Q9Y6I4 520 aa21.39■■□□□ 1.01
VCPKMT-202ENST00000395860 GREB1Q4ZG55 1949 aa21.39■■□□□ 1.01
VCPKMT-202ENST00000395860 GRXCR1A8MXD5 290 aa21.38■■□□□ 1.01
VCPKMT-202ENST00000395860 TNFRSF10BO14763 440 aa21.38■■□□□ 1.01
VCPKMT-202ENST00000395860 CEP104O60308 925 aa21.38■■□□□ 1.01
VCPKMT-202ENST00000395860 DAB1O75553 588 aa21.38■■□□□ 1.01
VCPKMT-202ENST00000395860 SLU7O95391 586 aaKnown RBP21.38■■□□□ 1.01
VCPKMT-202ENST00000395860 CTSAP10619 480 aa21.38■■□□□ 1.01
VCPKMT-202ENST00000395860 RWDD2BP57060 319 aa21.38■■□□□ 1.01
VCPKMT-202ENST00000395860 CREMQ03060 361 aa21.38■■□□□ 1.01
VCPKMT-202ENST00000395860 CKAP4Q07065 602 aaKnown RBP21.38■■□□□ 1.01
VCPKMT-202ENST00000395860 CDO1Q16878 200 aa21.38■■□□□ 1.01
VCPKMT-202ENST00000395860 C15orf59Q2T9L4 293 aaPredicted RBP21.38■■□□□ 1.01
VCPKMT-202ENST00000395860 CCDC14Q49A88 953 aa21.38■■□□□ 1.01
VCPKMT-202ENST00000395860 PM20D1Q6GTS8 502 aa21.38■■□□□ 1.01
VCPKMT-202ENST00000395860 DEFB106AQ8N104 65 aa21.38■■□□□ 1.01
VCPKMT-202ENST00000395860 NUP93Q8N1F7 819 aa21.38■■□□□ 1.01
VCPKMT-202ENST00000395860 CEP112Q8N8E3 955 aa21.38■■□□□ 1.01
VCPKMT-202ENST00000395860 MNS1Q8NEH6 495 aa21.38■■□□□ 1.01
VCPKMT-202ENST00000395860 ZNF461Q8TAF7 563 aa21.38■■□□□ 1.01
VCPKMT-202ENST00000395860 IRGQQ8WZA9 623 aa21.38■■□□□ 1.01
VCPKMT-202ENST00000395860 CARD9Q9H257 536 aa21.38■■□□□ 1.01
VCPKMT-202ENST00000395860 CRISPLD1Q9H336 500 aa21.38■■□□□ 1.01
VCPKMT-202ENST00000395860 POPDC2Q9HBU9 364 aa21.38■■□□□ 1.01
VCPKMT-202ENST00000395860 AFF4Q9UHB7 1163 aaKnown RBP21.38■■□□□ 1.01
VCPKMT-202ENST00000395860 ZNF638Q14966 1978 aaKnown RBP21.38■■□□□ 1.01
VCPKMT-202ENST00000395860 YJEFN3A6XGL0 299 aa21.38■■□□□ 1.01
VCPKMT-202ENST00000395860 E7ENQ6 273 aa21.38■■□□□ 1.01
VCPKMT-202ENST00000395860 LRCH4O75427 683 aa21.38■■□□□ 1.01
VCPKMT-202ENST00000395860 MYOGP15173 224 aa21.38■■□□□ 1.01
VCPKMT-202ENST00000395860 GJC1P36383 396 aa21.38■■□□□ 1.01
VCPKMT-202ENST00000395860 MATKP42679 507 aa21.38■■□□□ 1.01
VCPKMT-202ENST00000395860 PAFAH1B1P43034 410 aa21.38■■□□□ 1.01
VCPKMT-202ENST00000395860 RPL10AP62906 217 aaKnown RBP21.38■■□□□ 1.01
VCPKMT-202ENST00000395860 ATP11AP98196 1134 aa21.38■■□□□ 1.01
VCPKMT-202ENST00000395860 DCAF12L1Q5VU92 463 aa21.38■■□□□ 1.01
VCPKMT-202ENST00000395860 TPGS2Q68CL5 300 aa21.38■■□□□ 1.01
VCPKMT-202ENST00000395860 GOLGA1Q92805 767 aa21.38■■□□□ 1.01
VCPKMT-202ENST00000395860 PLVAPQ9BX97 442 aa21.38■■□□□ 1.01
VCPKMT-202ENST00000395860 RNF14Q9UBS8 474 aa21.38■■□□□ 1.01
VCPKMT-202ENST00000395860 PLXNA3P51805 1871 aa21.37■■□□□ 1.01
VCPKMT-202ENST00000395860 SOAT2O75908 522 aa21.37■■□□□ 1.01
VCPKMT-202ENST00000395860 ABLIM3O94929 683 aa21.37■■□□□ 1.01
VCPKMT-202ENST00000395860 LTFP02788 710 aa21.37■■□□□ 1.01
VCPKMT-202ENST00000395860 PTPN9P43378 593 aa21.37■■□□□ 1.01
VCPKMT-202ENST00000395860 HADHQ16836 314 aaKnown RBP21.37■■□□□ 1.01
VCPKMT-202ENST00000395860 FAM109BQ6ICB4 259 aaPredicted RBP21.37■■□□□ 1.01
VCPKMT-202ENST00000395860 HFE2Q6ZVN8 426 aa21.37■■□□□ 1.01
VCPKMT-202ENST00000395860 MS4A14Q96JA4 679 aa21.37■■□□□ 1.01
VCPKMT-202ENST00000395860 C17orf80Q9BSJ5 609 aa21.37■■□□□ 1.01
VCPKMT-202ENST00000395860 DDX23Q9BUQ8 820 aaKnown RBP21.37■■□□□ 1.01
VCPKMT-202ENST00000395860 FNIP2Q9P278 1114 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms