RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 PLXNA4Q9HCM2 1894 aa10.74□□□□□ -0.69
HIF1A-203ENST00000394997 ZNF487B1APH4 448 aa10.74□□□□□ -0.69
HIF1A-203ENST00000394997 F2P00734 622 aa10.74□□□□□ -0.69
HIF1A-203ENST00000394997 ITGB3P05106 788 aa10.74□□□□□ -0.69
HIF1A-203ENST00000394997 ALDH3A1P30838 453 aa10.74□□□□□ -0.69
HIF1A-203ENST00000394997 ETV4P43268 484 aa10.74□□□□□ -0.69
HIF1A-203ENST00000394997 SOX4Q06945 474 aaPredicted RBP10.74□□□□□ -0.69
HIF1A-203ENST00000394997 EFTUD2Q15029 972 aaKnown RBP eCLIP10.74□□□□□ -0.694e-7■■■■□ 24.9
HIF1A-203ENST00000394997 CTC1Q2NKJ3 1217 aa10.74□□□□□ -0.69
HIF1A-203ENST00000394997 P3H1Q32P28 736 aa10.74□□□□□ -0.69
HIF1A-203ENST00000394997 PMF1Q6P1K2 205 aa10.74□□□□□ -0.69
HIF1A-203ENST00000394997 FAM183BPQ6ZVS7 135 aa10.74□□□□□ -0.69
HIF1A-203ENST00000394997 EMC1Q8N766 993 aa10.74□□□□□ -0.69
HIF1A-203ENST00000394997 AFG1LQ8WV93 481 aa10.74□□□□□ -0.69
HIF1A-203ENST00000394997 TMEM176AQ96HP8 235 aa10.74□□□□□ -0.69
HIF1A-203ENST00000394997 TMEM121Q9BTD3 319 aa10.74□□□□□ -0.69
HIF1A-203ENST00000394997 PCDH9Q9HC56 1237 aa10.74□□□□□ -0.69
HIF1A-203ENST00000394997 TMEM30AQ9NV96 361 aa10.74□□□□□ -0.69
HIF1A-203ENST00000394997 TEX264Q9Y6I9 313 aa10.74□□□□□ -0.69
HIF1A-203ENST00000394997 A6NJR5 290 aa10.74□□□□□ -0.69
HIF1A-203ENST00000394997 SNX3O60493 162 aa10.74□□□□□ -0.69
HIF1A-203ENST00000394997 ALADP13716 330 aa10.74□□□□□ -0.69
HIF1A-203ENST00000394997 TAC1P20366 129 aa10.74□□□□□ -0.69
HIF1A-203ENST00000394997 CAV1Q03135 178 aa10.74□□□□□ -0.69
HIF1A-203ENST00000394997 CA9Q16790 459 aa10.74□□□□□ -0.69
HIF1A-203ENST00000394997 ZNF699Q32M78 642 aa10.74□□□□□ -0.69
HIF1A-203ENST00000394997 PPP1R2P3Q6NXS1 205 aa10.74□□□□□ -0.69
HIF1A-203ENST00000394997 C12orf29Q8N999 325 aa10.74□□□□□ -0.69
HIF1A-203ENST00000394997 ANLNQ9NQW6 1124 aa10.74□□□□□ -0.69
HIF1A-203ENST00000394997 RASGRF2O14827 1237 aa10.73□□□□□ -0.69
HIF1A-203ENST00000394997 HMGCRP04035 888 aa10.73□□□□□ -0.69
HIF1A-203ENST00000394997 PRKCGP05129 697 aa10.73□□□□□ -0.69
HIF1A-203ENST00000394997 ATP2A2P16615 1042 aaKnown RBP10.73□□□□□ -0.69
HIF1A-203ENST00000394997 MIPP30301 263 aa10.73□□□□□ -0.69
HIF1A-203ENST00000394997 MSH2P43246 934 aa10.73□□□□□ -0.69
HIF1A-203ENST00000394997 ZNF143P52747 638 aaPredicted RBP10.73□□□□□ -0.69
HIF1A-203ENST00000394997 HDAC4P56524 1084 aa10.73□□□□□ -0.69
HIF1A-203ENST00000394997 NKX3-2P78367 333 aa10.73□□□□□ -0.69
HIF1A-203ENST00000394997 SURF1Q15526 300 aa10.73□□□□□ -0.69
HIF1A-203ENST00000394997 ZNF394Q53GI3 561 aa10.73□□□□□ -0.69
HIF1A-203ENST00000394997 IZUMO3Q5VZ72 239 aa10.73□□□□□ -0.69
HIF1A-203ENST00000394997 CD300LGQ6UXG3 332 aa10.73□□□□□ -0.69
HIF1A-203ENST00000394997 TRPM8Q7Z2W7 1104 aa10.73□□□□□ -0.69
HIF1A-203ENST00000394997 KDM4CQ9H3R0 1056 aa10.73□□□□□ -0.69
HIF1A-203ENST00000394997 FGFR1OP2Q9NVK5 253 aa10.73□□□□□ -0.69
HIF1A-203ENST00000394997 PRMT7Q9NVM4 692 aaPredicted RBP10.73□□□□□ -0.69
HIF1A-203ENST00000394997 GHRP10912 638 aa10.73□□□□□ -0.69
HIF1A-203ENST00000394997 EPHX2P34913 555 aa10.73□□□□□ -0.69
HIF1A-203ENST00000394997 RPL22P35268 128 aaKnown RBP10.73□□□□□ -0.69
HIF1A-203ENST00000394997 TAP1Q03518 808 aa10.73□□□□□ -0.69
HIF1A-203ENST00000394997 MMRN1Q13201 1228 aa10.73□□□□□ -0.69
HIF1A-203ENST00000394997 ITIH4Q14624 930 aa10.73□□□□□ -0.69
HIF1A-203ENST00000394997 SOWAHAQ2M3V2 549 aa10.73□□□□□ -0.69
HIF1A-203ENST00000394997 DUSP28Q4G0W2 176 aa10.73□□□□□ -0.69
HIF1A-203ENST00000394997 ZNF618Q5T7W0 954 aa10.73□□□□□ -0.69
HIF1A-203ENST00000394997 WDR78Q5VTH9 848 aa10.73□□□□□ -0.69
HIF1A-203ENST00000394997 C9orf131Q5VYM1 1079 aa10.73□□□□□ -0.69
HIF1A-203ENST00000394997 VPS52Q8N1B4 723 aa10.73□□□□□ -0.69
HIF1A-203ENST00000394997 RNF169Q8NCN4 708 aa10.73□□□□□ -0.69
HIF1A-203ENST00000394997 UTP4Q969X6 686 aaKnown RBP10.73□□□□□ -0.69
HIF1A-203ENST00000394997 OLFM3Q96PB7 478 aa10.73□□□□□ -0.69
HIF1A-203ENST00000394997 DPEP3Q9H4B8 488 aa10.73□□□□□ -0.69
HIF1A-203ENST00000394997 TUBGCP4Q9UGJ1 667 aa10.73□□□□□ -0.69
HIF1A-203ENST00000394997 IRF5Q13568 498 aa10.73□□□□□ -0.69
HIF1A-203ENST00000394997 MORF4L2Q15014 288 aa10.73□□□□□ -0.69
HIF1A-203ENST00000394997 NOMO1Q15155 1222 aa10.73□□□□□ -0.69
HIF1A-203ENST00000394997 PLEKHG4Q58EX7 1191 aa10.73□□□□□ -0.69
HIF1A-203ENST00000394997 KCNT1Q5JUK3 1230 aa10.73□□□□□ -0.69
HIF1A-203ENST00000394997 PPP1R26Q5T8A7 1209 aaPredicted RBP10.73□□□□□ -0.69
HIF1A-203ENST00000394997 ANKRD23Q86SG2 305 aa10.73□□□□□ -0.69
HIF1A-203ENST00000394997 ZC3H18Q86VM9 953 aaKnown RBP10.73□□□□□ -0.69
HIF1A-203ENST00000394997 KLHDC8BQ8IXV7 354 aa10.73□□□□□ -0.69
HIF1A-203ENST00000394997 MAK16Q9BXY0 300 aaKnown RBP10.73□□□□□ -0.69
HIF1A-203ENST00000394997 CYP3A43Q9HB55 503 aa10.73□□□□□ -0.69
HIF1A-203ENST00000394997 METTL5Q9NRN9 209 aaKnown RBP10.73□□□□□ -0.69
HIF1A-203ENST00000394997 CDH23Q9H251 3354 aa10.72□□□□□ -0.69
HIF1A-203ENST00000394997 TCP11X1B4DZS4 312 aa10.72□□□□□ -0.69
HIF1A-203ENST00000394997 PAPSS1O43252 624 aaPredicted RBP10.72□□□□□ -0.69
HIF1A-203ENST00000394997 KRT15P19012 456 aa10.72□□□□□ -0.69
HIF1A-203ENST00000394997 CTCFP49711 727 aaPredicted RBP10.72□□□□□ -0.69
HIF1A-203ENST00000394997 SCARA5Q6ZMJ2 495 aa10.72□□□□□ -0.69
HIF1A-203ENST00000394997 FAM43BQ6ZT52 329 aaPredicted RBP10.72□□□□□ -0.69
HIF1A-203ENST00000394997 CAND1Q86VP6 1230 aaKnown RBP10.72□□□□□ -0.69
HIF1A-203ENST00000394997 SMG8Q8ND04 991 aaKnown RBP10.72□□□□□ -0.69
HIF1A-203ENST00000394997 CCDC77Q9BR77 488 aa10.72□□□□□ -0.69
HIF1A-203ENST00000394997 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.72□□□□□ -0.69
HIF1A-203ENST00000394997 HESX1Q9UBX0 185 aa10.72□□□□□ -0.69
HIF1A-203ENST00000394997 DERAQ9Y315 318 aa10.72□□□□□ -0.69
HIF1A-203ENST00000394997 CSADQ9Y600 493 aa10.72□□□□□ -0.69
HIF1A-203ENST00000394997 SHROOM3Q8TF72 1996 aa10.72□□□□□ -0.69
HIF1A-203ENST00000394997 LAMC2Q13753 1193 aa10.72□□□□□ -0.69
HIF1A-203ENST00000394997 ADGRD1Q6QNK2 874 aa10.72□□□□□ -0.69
HIF1A-203ENST00000394997 GSTA5Q7RTV2 222 aa10.72□□□□□ -0.69
HIF1A-203ENST00000394997 GPR142Q7Z601 462 aa10.72□□□□□ -0.69
HIF1A-203ENST00000394997 CCHCR1Q8TD31 782 aa10.72□□□□□ -0.69
HIF1A-203ENST00000394997 CLEC4CQ8WTT0 213 aa10.72□□□□□ -0.69
HIF1A-203ENST00000394997 RMDN2Q96LZ7 410 aa10.72□□□□□ -0.69
HIF1A-203ENST00000394997 BATF3Q9NR55 127 aa10.72□□□□□ -0.69
HIF1A-203ENST00000394997 SMYD2Q9NRG4 433 aa10.72□□□□□ -0.69
HIF1A-203ENST00000394997 ITGA11Q9UKX5 1188 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms