RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 NOP14P78316 857 aaKnown RBP16.88■□□□□ 0.29
SNCA-205ENST00000394991 CYP27A1Q02318 531 aa16.88■□□□□ 0.29
SNCA-205ENST00000394991 ZNF423Q2M1K9 1284 aa16.88■□□□□ 0.29
SNCA-205ENST00000394991 C19orf48Q6RUI8 117 aa16.88■□□□□ 0.29
SNCA-205ENST00000394991 USP49Q70CQ1 688 aa16.88■□□□□ 0.29
SNCA-205ENST00000394991 DPH6Q7L8W6 267 aa16.88■□□□□ 0.29
SNCA-205ENST00000394991 SLC41A1Q8IVJ1 513 aa16.88■□□□□ 0.29
SNCA-205ENST00000394991 ETFBKMTQ8IXQ9 262 aa16.88■□□□□ 0.29
SNCA-205ENST00000394991 OR5B17Q8NGF7 314 aa16.88■□□□□ 0.29
SNCA-205ENST00000394991 DNAJC19Q96DA6 116 aa16.88■□□□□ 0.29
SNCA-205ENST00000394991 FGFBP2Q9BYJ0 223 aa16.88■□□□□ 0.29
SNCA-205ENST00000394991 MRPL44Q9H9J2 332 aaKnown RBP16.88■□□□□ 0.29
SNCA-205ENST00000394991 CALCOCO1Q9P1Z2 691 aa16.88■□□□□ 0.29
SNCA-205ENST00000394991 EXOC7Q9UPT5 735 aa16.88■□□□□ 0.29
SNCA-205ENST00000394991 KIF3AQ9Y496 699 aa16.88■□□□□ 0.29
SNCA-205ENST00000394991 MYH10P35580 1976 aa16.88■□□□□ 0.29
SNCA-205ENST00000394991 IGHV1OR15-9A0A0B4J2B8 117 aa16.87■□□□□ 0.29
SNCA-205ENST00000394991 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.87■□□□□ 0.29
SNCA-205ENST00000394991 ARHGAP33O14559 1287 aa16.87■□□□□ 0.29
SNCA-205ENST00000394991 TRIM66O15016 1216 aa16.87■□□□□ 0.29
SNCA-205ENST00000394991 LDHAP00338 332 aaKnown RBP16.87■□□□□ 0.29
SNCA-205ENST00000394991 ABL1P00519 1130 aa16.87■□□□□ 0.29
SNCA-205ENST00000394991 MBL2P11226 248 aaPredicted RBP16.87■□□□□ 0.29
SNCA-205ENST00000394991 ZNF33AQ06730 810 aa16.87■□□□□ 0.29
SNCA-205ENST00000394991 SCAPQ12770 1279 aa16.87■□□□□ 0.29
SNCA-205ENST00000394991 TAF10Q12962 218 aa16.87■□□□□ 0.29
SNCA-205ENST00000394991 MAPRE1Q15691 268 aaKnown RBP16.87■□□□□ 0.29
SNCA-205ENST00000394991 SOWAHCQ53LP3 525 aaPredicted RBP16.87■□□□□ 0.29
SNCA-205ENST00000394991 MDH1BQ5I0G3 518 aa16.87■□□□□ 0.29
SNCA-205ENST00000394991 MIB1Q86YT6 1006 aa16.87■□□□□ 0.29
SNCA-205ENST00000394991 NOC3LQ8WTT2 800 aaKnown RBP16.87■□□□□ 0.29
SNCA-205ENST00000394991 HPDLQ96IR7 371 aa16.87■□□□□ 0.29
SNCA-205ENST00000394991 ZFRQ96KR1 1074 aaKnown RBP16.87■□□□□ 0.29
SNCA-205ENST00000394991 C8orf48Q96LL4 319 aa16.87■□□□□ 0.29
SNCA-205ENST00000394991 PCIF1Q9H4Z3 704 aa16.87■□□□□ 0.29
SNCA-205ENST00000394991 INTS13Q9NVM9 706 aa16.87■□□□□ 0.29
SNCA-205ENST00000394991 DNAAF2Q9NVR5 837 aaKnown RBP16.87■□□□□ 0.29
SNCA-205ENST00000394991 SEL1LQ9UBV2 794 aa16.87■□□□□ 0.29
SNCA-205ENST00000394991 LOC400499M0QZD8 3231 aa16.87■□□□□ 0.29
SNCA-205ENST00000394991 TRIM24O15164 1050 aa16.86■□□□□ 0.29
SNCA-205ENST00000394991 SH3BP5O60239 455 aa16.86■□□□□ 0.29
SNCA-205ENST00000394991 EIF5BO60841 1220 aaKnown RBP16.86■□□□□ 0.29
SNCA-205ENST00000394991 TULP3O75386 442 aa16.86■□□□□ 0.29
SNCA-205ENST00000394991 GJB3O75712 270 aa16.86■□□□□ 0.29
SNCA-205ENST00000394991 GCNT3O95395 438 aa16.86■□□□□ 0.29
SNCA-205ENST00000394991 WASP42768 502 aa16.86■□□□□ 0.29
SNCA-205ENST00000394991 PPP3CCP48454 512 aa16.86■□□□□ 0.29
SNCA-205ENST00000394991 SLC36A4Q6YBV0 504 aa16.86■□□□□ 0.29
SNCA-205ENST00000394991 ZNF513Q8N8E2 541 aaPredicted RBP16.86■□□□□ 0.29
SNCA-205ENST00000394991 NAT16Q8N8M0 369 aa16.86■□□□□ 0.29
SNCA-205ENST00000394991 MYCBPAPQ8TBZ2 947 aa16.86■□□□□ 0.29
SNCA-205ENST00000394991 EPSTI1Q96J88 318 aa16.86■□□□□ 0.29
SNCA-205ENST00000394991 MRPL45Q9BRJ2 306 aaKnown RBP16.86■□□□□ 0.29
SNCA-205ENST00000394991 CD248Q9HCU0 757 aa16.86■□□□□ 0.29
SNCA-205ENST00000394991 SETXQ7Z333 2677 aaKnown RBP16.86■□□□□ 0.29
SNCA-205ENST00000394991 SMG1Q96Q15 3661 aaKnown RBP16.85■□□□□ 0.29
SNCA-205ENST00000394991 A0A1W2PQF6 199 aa16.85■□□□□ 0.29
SNCA-205ENST00000394991 E2F8A0AVK6 867 aa16.85■□□□□ 0.29
SNCA-205ENST00000394991 TBC1D3BA6NDS4 549 aa16.85■□□□□ 0.29
SNCA-205ENST00000394991 H3BQV1 296 aa16.85■□□□□ 0.29
SNCA-205ENST00000394991 HOXC11O43248 304 aaPredicted RBP16.85■□□□□ 0.29
SNCA-205ENST00000394991 HOXB2P14652 356 aa16.85■□□□□ 0.29
SNCA-205ENST00000394991 GAP43P17677 238 aa16.85■□□□□ 0.29
SNCA-205ENST00000394991 GJB2P29033 226 aa16.85■□□□□ 0.29
SNCA-205ENST00000394991 RDXP35241 583 aaKnown RBP16.85■□□□□ 0.29
SNCA-205ENST00000394991 GAD2Q05329 585 aa16.85■□□□□ 0.29
SNCA-205ENST00000394991 IFRD2Q12894 506 aaPredicted RBP16.85■□□□□ 0.29
SNCA-205ENST00000394991 MYO1EQ12965 1108 aa16.85■□□□□ 0.29
SNCA-205ENST00000394991 COL28A1Q2UY09 1125 aa16.85■□□□□ 0.29
SNCA-205ENST00000394991 RABEPKQ7Z6M1 372 aa16.85■□□□□ 0.29
SNCA-205ENST00000394991 PDZD3Q86UT5 571 aa16.85■□□□□ 0.29
SNCA-205ENST00000394991 DDX42Q86XP3 938 aaKnown RBP eCLIP16.85■□□□□ 0.29
SNCA-205ENST00000394991 TERB1Q8NA31 727 aa16.85■□□□□ 0.29
SNCA-205ENST00000394991 ADAMTS14Q8WXS8 1223 aa16.85■□□□□ 0.29
SNCA-205ENST00000394991 WBP2Q969T9 261 aa16.85■□□□□ 0.29
SNCA-205ENST00000394991 ANKRD36BP1Q96IX9 119 aa16.85■□□□□ 0.29
SNCA-205ENST00000394991 CD93Q9NPY3 652 aa16.85■□□□□ 0.29
SNCA-205ENST00000394991 EHD2Q9NZN4 543 aa16.85■□□□□ 0.29
SNCA-205ENST00000394991 TBC1D14Q9P2M4 693 aa16.85■□□□□ 0.29
SNCA-205ENST00000394991 CELSR3Q9NYQ7 3312 aa16.85■□□□□ 0.29
SNCA-205ENST00000394991 FTH1P19P0C7X4 201 aa16.84■□□□□ 0.29
SNCA-205ENST00000394991 NDUFV2P19404 249 aa16.84■□□□□ 0.29
SNCA-205ENST00000394991 HNRNPDQ14103 355 aaKnown RBP16.84■□□□□ 0.29
SNCA-205ENST00000394991 SF3A1Q15459 793 aaKnown RBP16.84■□□□□ 0.29
SNCA-205ENST00000394991 TRIP6Q15654 476 aaKnown RBP16.84■□□□□ 0.29
SNCA-205ENST00000394991 C10orf76Q5T2E6 689 aa16.84■□□□□ 0.29
SNCA-205ENST00000394991 TDRD10Q5VZ19 366 aaKnown RBP16.84■□□□□ 0.29
SNCA-205ENST00000394991 EGFLAMQ63HQ2 1017 aa16.84■□□□□ 0.29
SNCA-205ENST00000394991 BBS7Q8IWZ6 715 aa16.84■□□□□ 0.29
SNCA-205ENST00000394991 SYCP3Q8IZU3 236 aa16.84■□□□□ 0.29
SNCA-205ENST00000394991 GPD1LQ8N335 351 aa16.84■□□□□ 0.29
SNCA-205ENST00000394991 PNPLA1Q8N8W4 532 aa16.84■□□□□ 0.29
SNCA-205ENST00000394991 TRIML1Q8N9V2 468 aa16.84■□□□□ 0.29
SNCA-205ENST00000394991 ERLEC1Q96DZ1 483 aa16.84■□□□□ 0.29
SNCA-205ENST00000394991 HSPA12BQ96MM6 686 aa16.84■□□□□ 0.29
SNCA-205ENST00000394991 SLITRK1Q96PX8 696 aa16.84■□□□□ 0.29
SNCA-205ENST00000394991 ACOX2Q99424 681 aa16.84■□□□□ 0.29
SNCA-205ENST00000394991 ZNF518BQ9C0D4 1074 aa16.84■□□□□ 0.29
SNCA-205ENST00000394991 DPEP3Q9H4B8 488 aa16.84■□□□□ 0.29
SNCA-205ENST00000394991 OLFML3Q9NRN5 406 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms