RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 CCSER2Q9H7U1 834 aa9.4□□□□□ -0.9
ATG4A-205ENST00000394892 KRT82Q9NSB4 513 aa9.4□□□□□ -0.9
ATG4A-205ENST00000394892 FAM49BQ9NUQ9 324 aa9.4□□□□□ -0.9
ATG4A-205ENST00000394892 THG1LQ9NWX6 298 aaKnown RBP9.4□□□□□ -0.9
ATG4A-205ENST00000394892 DUS2Q9NX74 493 aaKnown RBP9.4□□□□□ -0.9
ATG4A-205ENST00000394892 SMPD4Q9NXE4 827 aa9.4□□□□□ -0.9
ATG4A-205ENST00000394892 TRPM5Q9NZQ8 1165 aa9.4□□□□□ -0.9
ATG4A-205ENST00000394892 GMIPQ9P107 970 aa9.4□□□□□ -0.9
ATG4A-205ENST00000394892 FRMD4BQ9Y2L6 1034 aa9.4□□□□□ -0.9
ATG4A-205ENST00000394892 ATP6V1DQ9Y5K8 247 aa9.4□□□□□ -0.9
ATG4A-205ENST00000394892 CPQQ9Y646 472 aa9.4□□□□□ -0.9
ATG4A-205ENST00000394892 TICRRQ7Z2Z1 1910 aa9.4□□□□□ -0.9
ATG4A-205ENST00000394892 KIF26AQ9ULI4 1882 aaPredicted RBP9.4□□□□□ -0.91
ATG4A-205ENST00000394892 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.39□□□□□ -0.91
ATG4A-205ENST00000394892 SLC30A4O14863 429 aa9.39□□□□□ -0.91
ATG4A-205ENST00000394892 RNF40O75150 1001 aa9.39□□□□□ -0.91
ATG4A-205ENST00000394892 AP1G2O75843 785 aa9.39□□□□□ -0.91
ATG4A-205ENST00000394892 TBX18O95935 607 aa9.39□□□□□ -0.91
ATG4A-205ENST00000394892 CYP17A1P05093 508 aa9.39□□□□□ -0.91
ATG4A-205ENST00000394892 ADRB1P08588 477 aa9.39□□□□□ -0.91
ATG4A-205ENST00000394892 HNRNPLP14866 589 aaKnown RBP eCLIP9.39□□□□□ -0.918e-11■■■□□ 18.4
ATG4A-205ENST00000394892 ANXA13P27216 316 aa9.39□□□□□ -0.91
ATG4A-205ENST00000394892 YWHAQP27348 245 aa9.39□□□□□ -0.91
ATG4A-205ENST00000394892 PIK3CAP42336 1068 aa9.39□□□□□ -0.91
ATG4A-205ENST00000394892 SLC6A11P48066 632 aa9.39□□□□□ -0.91
ATG4A-205ENST00000394892 MAP3K7CLP57077 242 aa9.39□□□□□ -0.91
ATG4A-205ENST00000394892 ENPEPQ07075 957 aa9.39□□□□□ -0.91
ATG4A-205ENST00000394892 LPAL2Q16609 132 aa9.39□□□□□ -0.91
ATG4A-205ENST00000394892 EDRF1Q3B7T1 1238 aa9.39□□□□□ -0.91
ATG4A-205ENST00000394892 PPM1JQ5JR12 505 aa9.39□□□□□ -0.91
ATG4A-205ENST00000394892 SNX30Q5VWJ9 437 aa9.39□□□□□ -0.91
ATG4A-205ENST00000394892 HEATR6Q6AI08 1181 aaKnown RBP9.39□□□□□ -0.91
ATG4A-205ENST00000394892 ISM2Q6H9L7 571 aa9.39□□□□□ -0.91
ATG4A-205ENST00000394892 RHBDF2Q6PJF5 856 aa9.39□□□□□ -0.91
ATG4A-205ENST00000394892 CLEC20AQ6ZU45 233 aa9.39□□□□□ -0.91
ATG4A-205ENST00000394892 INTS8Q75QN2 995 aaKnown RBP9.39□□□□□ -0.91
ATG4A-205ENST00000394892 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.39□□□□□ -0.91
ATG4A-205ENST00000394892 FILIP1Q7Z7B0 1213 aa9.39□□□□□ -0.91
ATG4A-205ENST00000394892 UNC93AQ86WB7 457 aa9.39□□□□□ -0.91
ATG4A-205ENST00000394892 C12orf40Q86WS4 652 aa9.39□□□□□ -0.91
ATG4A-205ENST00000394892 ADGRG2Q8IZP9 1017 aa9.39□□□□□ -0.91
ATG4A-205ENST00000394892 TAF4BQ92750 862 aa9.39□□□□□ -0.91
ATG4A-205ENST00000394892 HNRNPABQ99729 332 aaKnown RBP9.39□□□□□ -0.91
ATG4A-205ENST00000394892 DUSP9Q99956 384 aaKnown RBP9.39□□□□□ -0.91
ATG4A-205ENST00000394892 MMRN2Q9H8L6 949 aa9.39□□□□□ -0.91
ATG4A-205ENST00000394892 NMUR1Q9HB89 426 aa9.39□□□□□ -0.91
ATG4A-205ENST00000394892 TMEM8AQ9HCN3 771 aa9.39□□□□□ -0.91
ATG4A-205ENST00000394892 CFAP97Q9P2B7 532 aa9.39□□□□□ -0.91
ATG4A-205ENST00000394892 MAN1B1Q9UKM7 699 aa9.39□□□□□ -0.91
ATG4A-205ENST00000394892 HCN2Q9UL51 889 aa9.39□□□□□ -0.91
ATG4A-205ENST00000394892 PATJQ8NI35 1801 aa9.39□□□□□ -0.91
ATG4A-205ENST00000394892 PPP1R3GB7ZBB8 358 aa9.38□□□□□ -0.91
ATG4A-205ENST00000394892 K7EQS6 105 aa9.38□□□□□ -0.91
ATG4A-205ENST00000394892 CD58P19256 250 aa9.38□□□□□ -0.91
ATG4A-205ENST00000394892 ADORA2BP29275 332 aa9.38□□□□□ -0.91
ATG4A-205ENST00000394892 HOXA6P31267 233 aa9.38□□□□□ -0.91
ATG4A-205ENST00000394892 NUCB2P80303 420 aa9.38□□□□□ -0.91
ATG4A-205ENST00000394892 CSRP2Q16527 193 aa9.38□□□□□ -0.91
ATG4A-205ENST00000394892 ZNF658Q5TYW1 1059 aaPredicted RBP9.38□□□□□ -0.91
ATG4A-205ENST00000394892 IL31Q6EBC2 164 aa9.38□□□□□ -0.91
ATG4A-205ENST00000394892 CC2D1AQ6P1N0 951 aaPredicted RBP9.38□□□□□ -0.91
ATG4A-205ENST00000394892 CEP68Q76N32 757 aa9.38□□□□□ -0.91
ATG4A-205ENST00000394892 SCD5Q86SK9 330 aa9.38□□□□□ -0.91
ATG4A-205ENST00000394892 PHTF2Q8N3S3 785 aa9.38□□□□□ -0.91
ATG4A-205ENST00000394892 SYNPOQ8N3V7 929 aa9.38□□□□□ -0.91
ATG4A-205ENST00000394892 UBR7Q8N806 425 aa9.38□□□□□ -0.91
ATG4A-205ENST00000394892 SLC4A11Q8NBS3 891 aa9.38□□□□□ -0.91
ATG4A-205ENST00000394892 FBXO32Q969P5 355 aa9.38□□□□□ -0.91
ATG4A-205ENST00000394892 SMARCD1Q96GM5 515 aa9.38□□□□□ -0.91
ATG4A-205ENST00000394892 TNIP3Q96KP6 325 aa9.38□□□□□ -0.91
ATG4A-205ENST00000394892 TIGD1Q96MW7 591 aa9.38□□□□□ -0.91
ATG4A-205ENST00000394892 MED15Q96RN5 788 aa9.38□□□□□ -0.91
ATG4A-205ENST00000394892 P2RY13Q9BPV8 354 aa9.38□□□□□ -0.91
ATG4A-205ENST00000394892 MED10Q9BTT4 135 aa9.38□□□□□ -0.91
ATG4A-205ENST00000394892 NIF3L1Q9GZT8 377 aa9.38□□□□□ -0.91
ATG4A-205ENST00000394892 CYP3A43Q9HB55 503 aa9.38□□□□□ -0.91
ATG4A-205ENST00000394892 DMAP1Q9NPF5 467 aaPredicted RBP9.38□□□□□ -0.91
ATG4A-205ENST00000394892 SEMA4GQ9NTN9 838 aa9.38□□□□□ -0.91
ATG4A-205ENST00000394892 COQ4Q9Y3A0 265 aa9.38□□□□□ -0.91
ATG4A-205ENST00000394892 CEP250Q9BV73 2442 aa9.37□□□□□ -0.91
ATG4A-205ENST00000394892 MIA3Q5JRA6 1907 aa9.37□□□□□ -0.91
ATG4A-205ENST00000394892 NCOR2Q9Y618 2525 aa9.37□□□□□ -0.91
ATG4A-205ENST00000394892 NUP210Q8TEM1 1887 aaPredicted RBP9.37□□□□□ -0.91
ATG4A-205ENST00000394892 TULP2O00295 520 aa9.37□□□□□ -0.91
ATG4A-205ENST00000394892 MDM4O15151 490 aa9.37□□□□□ -0.91
ATG4A-205ENST00000394892 TRIM24O15164 1050 aa9.37□□□□□ -0.91
ATG4A-205ENST00000394892 CYP26A1O43174 497 aa9.37□□□□□ -0.91
ATG4A-205ENST00000394892 GABBR2O75899 941 aa9.37□□□□□ -0.91
ATG4A-205ENST00000394892 RTN3O95197 1032 aaPredicted RBP9.37□□□□□ -0.91
ATG4A-205ENST00000394892 KIF20AO95235 890 aa9.37□□□□□ -0.91
ATG4A-205ENST00000394892 ABL1P00519 1130 aa9.37□□□□□ -0.91
ATG4A-205ENST00000394892 PFKLP17858 780 aa9.37□□□□□ -0.91
ATG4A-205ENST00000394892 GTF2H1P32780 548 aa9.37□□□□□ -0.91
ATG4A-205ENST00000394892 PPP3CCP48454 512 aa9.37□□□□□ -0.91
ATG4A-205ENST00000394892 IFNAR2P48551 515 aa9.37□□□□□ -0.91
ATG4A-205ENST00000394892 RAD23BP54727 409 aa9.37□□□□□ -0.91
ATG4A-205ENST00000394892 GRSF1Q12849 480 aaKnown RBP eCLIP9.37□□□□□ -0.91
ATG4A-205ENST00000394892 DHCR24Q15392 516 aa9.37□□□□□ -0.91
ATG4A-205ENST00000394892 ZNF394Q53GI3 561 aa9.37□□□□□ -0.91
ATG4A-205ENST00000394892 PPP1R26Q5T8A7 1209 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms