RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 INTS6LQ5JSJ4 861 aaKnown RBP11.98□□□□□ -0.49
SMARCAL1-203ENST00000392128 ZNF280BQ86YH2 543 aa11.98□□□□□ -0.49
SMARCAL1-203ENST00000392128 KCTD6Q8NC69 237 aa11.98□□□□□ -0.49
SMARCAL1-203ENST00000392128 HASPINQ8TF76 798 aa11.98□□□□□ -0.49
SMARCAL1-203ENST00000392128 FAM172AQ8WUF8 416 aa11.98□□□□□ -0.49
SMARCAL1-203ENST00000392128 TEKT4Q8WW24 435 aa11.98□□□□□ -0.49
SMARCAL1-203ENST00000392128 CENPIQ92674 756 aaPredicted RBP11.98□□□□□ -0.49
SMARCAL1-203ENST00000392128 SMARCD1Q96GM5 515 aa11.98□□□□□ -0.49
SMARCAL1-203ENST00000392128 TBCBQ99426 244 aa11.98□□□□□ -0.49
SMARCAL1-203ENST00000392128 PKMYT1Q99640 499 aa11.98□□□□□ -0.49
SMARCAL1-203ENST00000392128 ZDHHC18Q9NUE0 388 aa11.98□□□□□ -0.49
SMARCAL1-203ENST00000392128 TBC1D13Q9NVG8 400 aa11.98□□□□□ -0.49
SMARCAL1-203ENST00000392128 PCDHB8Q9UN66 801 aa11.98□□□□□ -0.49
SMARCAL1-203ENST00000392128 SCN5AQ14524 2016 aa11.98□□□□□ -0.49
SMARCAL1-203ENST00000392128 PATJQ8NI35 1801 aa11.98□□□□□ -0.49
SMARCAL1-203ENST00000392128 LIASO43766 372 aa11.98□□□□□ -0.49
SMARCAL1-203ENST00000392128 HSF2BPO75031 334 aa11.98□□□□□ -0.49
SMARCAL1-203ENST00000392128 AP1G2O75843 785 aa11.98□□□□□ -0.49
SMARCAL1-203ENST00000392128 RPL21P46778 160 aaKnown RBP11.98□□□□□ -0.49
SMARCAL1-203ENST00000392128 ARSEP51690 589 aa11.98□□□□□ -0.49
SMARCAL1-203ENST00000392128 TTC3P53804 2025 aa11.98□□□□□ -0.49
SMARCAL1-203ENST00000392128 MAP3K7CLP57077 242 aa11.98□□□□□ -0.49
SMARCAL1-203ENST00000392128 MRPS5P82675 430 aaKnown RBP11.98□□□□□ -0.49
SMARCAL1-203ENST00000392128 ATP11AP98196 1134 aa11.98□□□□□ -0.49
SMARCAL1-203ENST00000392128 LMNB2Q03252 620 aa11.98□□□□□ -0.49
SMARCAL1-203ENST00000392128 KRT17Q04695 432 aa11.98□□□□□ -0.49
SMARCAL1-203ENST00000392128 PTK6Q13882 451 aa11.98□□□□□ -0.49
SMARCAL1-203ENST00000392128 PPP1R7Q15435 360 aa11.98□□□□□ -0.49
SMARCAL1-203ENST00000392128 CDO1Q16878 200 aa11.98□□□□□ -0.49
SMARCAL1-203ENST00000392128 BOLA3Q53S33 107 aa11.98□□□□□ -0.49
SMARCAL1-203ENST00000392128 OVOS1Q6IE37 1185 aa11.98□□□□□ -0.49
SMARCAL1-203ENST00000392128 TSEN2Q8NCE0 465 aaKnown RBP11.98□□□□□ -0.49
SMARCAL1-203ENST00000392128 SMOQ99835 787 aa11.98□□□□□ -0.49
SMARCAL1-203ENST00000392128 DDX23Q9BUQ8 820 aaKnown RBP11.98□□□□□ -0.49
SMARCAL1-203ENST00000392128 CRISPLD2Q9H0B8 497 aa11.98□□□□□ -0.49
SMARCAL1-203ENST00000392128 LRRC4Q9HBW1 653 aa11.98□□□□□ -0.49
SMARCAL1-203ENST00000392128 NGRNQ9NPE2 291 aaKnown RBP11.98□□□□□ -0.49
SMARCAL1-203ENST00000392128 WBP1LQ9NX94 342 aa11.98□□□□□ -0.49
SMARCAL1-203ENST00000392128 GRHL1Q9NZI5 618 aa11.98□□□□□ -0.49
SMARCAL1-203ENST00000392128 SNX24Q9Y343 169 aa11.98□□□□□ -0.49
SMARCAL1-203ENST00000392128 TET1Q8NFU7 2136 aa11.98□□□□□ -0.49
SMARCAL1-203ENST00000392128 FBXO21O94952 628 aa11.97□□□□□ -0.49
SMARCAL1-203ENST00000392128 PARNO95453 639 aaKnown RBP11.97□□□□□ -0.49
SMARCAL1-203ENST00000392128 HDAC4P56524 1084 aa11.97□□□□□ -0.49
SMARCAL1-203ENST00000392128 KCTD19Q17RG1 926 aaPredicted RBP11.97□□□□□ -0.49
SMARCAL1-203ENST00000392128 RAB6CQ53S08 254 aa11.97□□□□□ -0.49
SMARCAL1-203ENST00000392128 RAB41Q5JT25 222 aa11.97□□□□□ -0.49
SMARCAL1-203ENST00000392128 ALS2CLQ60I27 953 aa11.97□□□□□ -0.49
SMARCAL1-203ENST00000392128 ZDHHC24Q6UX98 284 aa11.97□□□□□ -0.49
SMARCAL1-203ENST00000392128 BBS12Q6ZW61 710 aa11.97□□□□□ -0.49
SMARCAL1-203ENST00000392128 VSIG1Q86XK7 387 aa11.97□□□□□ -0.49
SMARCAL1-203ENST00000392128 THEM5Q8N1Q8 247 aa11.97□□□□□ -0.49
SMARCAL1-203ENST00000392128 ZMIZ2Q8NF64 920 aa11.97□□□□□ -0.49
SMARCAL1-203ENST00000392128 HSPH1Q92598 858 aa11.97□□□□□ -0.49
SMARCAL1-203ENST00000392128 MYLPFQ96A32 169 aa11.97□□□□□ -0.49
SMARCAL1-203ENST00000392128 LRRC45Q96CN5 670 aa11.97□□□□□ -0.49
SMARCAL1-203ENST00000392128 FMO2Q99518 471 aa11.97□□□□□ -0.49
SMARCAL1-203ENST00000392128 FRMD8P1Q9BZ68 369 aaPredicted RBP11.97□□□□□ -0.49
SMARCAL1-203ENST00000392128 RAB6CQ9H0N0 254 aa11.97□□□□□ -0.49
SMARCAL1-203ENST00000392128 CSNK1G1Q9HCP0 422 aa11.97□□□□□ -0.49
SMARCAL1-203ENST00000392128 MED4Q9NPJ6 270 aa11.97□□□□□ -0.49
SMARCAL1-203ENST00000392128 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.97□□□□□ -0.49
SMARCAL1-203ENST00000392128 NEU2Q9Y3R4 380 aa11.97□□□□□ -0.49
SMARCAL1-203ENST00000392128 PCDHB7Q9Y5E2 793 aa11.97□□□□□ -0.49
SMARCAL1-203ENST00000392128 MDM4O15151 490 aa11.97□□□□□ -0.49
SMARCAL1-203ENST00000392128 DAB1O75553 588 aa11.97□□□□□ -0.49
SMARCAL1-203ENST00000392128 MATKP42679 507 aa11.97□□□□□ -0.49
SMARCAL1-203ENST00000392128 MNX1P50219 401 aaPredicted RBP11.97□□□□□ -0.49
SMARCAL1-203ENST00000392128 CBX1P83916 185 aa11.97□□□□□ -0.49
SMARCAL1-203ENST00000392128 RNASELQ05823 741 aaKnown RBP11.97□□□□□ -0.49
SMARCAL1-203ENST00000392128 PDK2Q15119 407 aa11.97□□□□□ -0.49
SMARCAL1-203ENST00000392128 MAPRE1Q15691 268 aaKnown RBP11.97□□□□□ -0.49
SMARCAL1-203ENST00000392128 SLC39A5Q6ZMH5 540 aa11.97□□□□□ -0.49
SMARCAL1-203ENST00000392128 STRADAQ7RTN6 431 aa11.97□□□□□ -0.49
SMARCAL1-203ENST00000392128 SIX6OS1Q8N1H7 587 aa11.97□□□□□ -0.49
SMARCAL1-203ENST00000392128 TTC13Q8NBP0 860 aa11.97□□□□□ -0.49
SMARCAL1-203ENST00000392128 CCDC114Q96M63 670 aa11.97□□□□□ -0.49
SMARCAL1-203ENST00000392128 TOX2Q96NM4 488 aa11.97□□□□□ -0.49
SMARCAL1-203ENST00000392128 FAM193BQ96PV7 902 aaPredicted RBP11.97□□□□□ -0.49
SMARCAL1-203ENST00000392128 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.97□□□□□ -0.49
SMARCAL1-203ENST00000392128 DRG1Q9Y295 367 aaKnown RBP11.97□□□□□ -0.49
SMARCAL1-203ENST00000392128 GOLGA6BA6NDN3 693 aa11.96□□□□□ -0.49
SMARCAL1-203ENST00000392128 F8W810 466 aa11.96□□□□□ -0.49
SMARCAL1-203ENST00000392128 H3BQF6 201 aa11.96□□□□□ -0.49
SMARCAL1-203ENST00000392128 CXCL10P02778 98 aa11.96□□□□□ -0.49
SMARCAL1-203ENST00000392128 CD48P09326 243 aa11.96□□□□□ -0.49
SMARCAL1-203ENST00000392128 TKTL1P51854 596 aa11.96□□□□□ -0.49
SMARCAL1-203ENST00000392128 BYSLQ13895 437 aaKnown RBP11.96□□□□□ -0.49
SMARCAL1-203ENST00000392128 C1orf53Q5VUE5 145 aa11.96□□□□□ -0.49
SMARCAL1-203ENST00000392128 MAP7D3Q8IWC1 876 aa11.96□□□□□ -0.49
SMARCAL1-203ENST00000392128 ABI1Q8IZP0 508 aa11.96□□□□□ -0.49
SMARCAL1-203ENST00000392128 OR10T2Q8NGX3 314 aa11.96□□□□□ -0.49
SMARCAL1-203ENST00000392128 NKD2Q969F2 451 aaPredicted RBP11.96□□□□□ -0.49
SMARCAL1-203ENST00000392128 CNGB3Q9NQW8 809 aa11.96□□□□□ -0.49
SMARCAL1-203ENST00000392128 WHRNQ9P202 907 aa11.96□□□□□ -0.49
SMARCAL1-203ENST00000392128 ZNF487B1APH4 448 aa11.96□□□□□ -0.5
SMARCAL1-203ENST00000392128 HHLA1C9JL84 531 aa11.96□□□□□ -0.5
SMARCAL1-203ENST00000392128 CST8O60676 142 aa11.96□□□□□ -0.5
SMARCAL1-203ENST00000392128 OAS2P29728 719 aaKnown RBP11.96□□□□□ -0.5
SMARCAL1-203ENST00000392128 CACNA2D1P54289 1103 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms