RNA–Protein interactions for RNA: ENST00000392090.6

PDCD2-202, Transcript of programmed cell death 2, humanhuman

TSL 1 (best) BASIC

Gene PDCD2, Length 936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-202ENST00000392090 GMIPQ9P107 970 aa20.71■□□□□ 0.91
PDCD2-202ENST00000392090 FBXO4Q9UKT5 387 aa20.71■□□□□ 0.91
PDCD2-202ENST00000392090 CPQQ9Y646 472 aa20.71■□□□□ 0.91
PDCD2-202ENST00000392090 DMDP11532 3685 aa20.71■□□□□ 0.91
PDCD2-202ENST00000392090 HELZP42694 1942 aaKnown RBP20.7■□□□□ 0.91
PDCD2-202ENST00000392090 RIF1Q5UIP0 2472 aaKnown RBP20.7■□□□□ 0.9
PDCD2-202ENST00000392090 PATJQ8NI35 1801 aa20.7■□□□□ 0.9
PDCD2-202ENST00000392090 OTOL1A6NHN0 477 aaPredicted RBP20.7■□□□□ 0.9
PDCD2-202ENST00000392090 FGFR1OPO95684 399 aaKnown RBP20.7■□□□□ 0.9
PDCD2-202ENST00000392090 TCF3P15923 654 aa20.7■□□□□ 0.9
PDCD2-202ENST00000392090 YWHAEP62258 255 aaKnown RBP20.7■□□□□ 0.9
PDCD2-202ENST00000392090 LRMPQ12912 555 aa20.7■□□□□ 0.9
PDCD2-202ENST00000392090 CUL2Q13617 745 aa20.7■□□□□ 0.9
PDCD2-202ENST00000392090 DGKKQ5KSL6 1271 aa20.7■□□□□ 0.9
PDCD2-202ENST00000392090 PPP1R26Q5T8A7 1209 aaPredicted RBP20.7■□□□□ 0.9
PDCD2-202ENST00000392090 MAML2Q8IZL2 1156 aaPredicted RBP20.7■□□□□ 0.9
PDCD2-202ENST00000392090 SRRTQ9BXP5 876 aaKnown RBP20.7■□□□□ 0.9
PDCD2-202ENST00000392090 ECT2Q9H8V3 914 aa20.7■□□□□ 0.9
PDCD2-202ENST00000392090 RBM12Q9NTZ6 932 aaKnown RBP20.7■□□□□ 0.9
PDCD2-202ENST00000392090 PTPRZ1P23471 2315 aaPredicted RBP20.7■□□□□ 0.9
PDCD2-202ENST00000392090 OLFM2O95897 454 aa20.69■□□□□ 0.9
PDCD2-202ENST00000392090 RAD23BP54727 409 aa20.69■□□□□ 0.9
PDCD2-202ENST00000392090 NR1H3Q13133 447 aa20.69■□□□□ 0.9
PDCD2-202ENST00000392090 PPP2R5DQ14738 602 aa20.69■□□□□ 0.9
PDCD2-202ENST00000392090 ZNF528Q3MIS6 628 aa20.69■□□□□ 0.9
PDCD2-202ENST00000392090 DDX42Q86XP3 938 aaKnown RBP eCLIP20.69■□□□□ 0.9
PDCD2-202ENST00000392090 SLC4A11Q8NBS3 891 aa20.69■□□□□ 0.9
PDCD2-202ENST00000392090 EXOC4Q96A65 974 aa20.69■□□□□ 0.9
PDCD2-202ENST00000392090 DUSP16Q9BY84 665 aa20.69■□□□□ 0.9
PDCD2-202ENST00000392090 TLR8Q9NR97 1041 aaKnown RBP20.69■□□□□ 0.9
PDCD2-202ENST00000392090 R4GN57 208 aa20.69■□□□□ 0.9
PDCD2-202ENST00000392090 FAM92AA1XBS5 289 aa20.68■□□□□ 0.9
PDCD2-202ENST00000392090 COCHO43405 550 aa20.68■□□□□ 0.9
PDCD2-202ENST00000392090 CCDC192P0DO97 292 aa20.68■□□□□ 0.9
PDCD2-202ENST00000392090 ACO1P21399 889 aaKnown RBP20.68■□□□□ 0.9
PDCD2-202ENST00000392090 TBXAS1P24557 533 aaPredicted RBP20.68■□□□□ 0.9
PDCD2-202ENST00000392090 TUBP50607 506 aa20.68■□□□□ 0.9
PDCD2-202ENST00000392090 CCR3P51677 355 aa20.68■□□□□ 0.9
PDCD2-202ENST00000392090 ZXDBP98169 803 aa20.68■□□□□ 0.9
PDCD2-202ENST00000392090 GRSF1Q12849 480 aaKnown RBP eCLIP20.68■□□□□ 0.9
PDCD2-202ENST00000392090 EML3Q32P44 896 aa20.68■□□□□ 0.9
PDCD2-202ENST00000392090 SNX30Q5VWJ9 437 aa20.68■□□□□ 0.9
PDCD2-202ENST00000392090 GPRIN1Q7Z2K8 1008 aa20.68■□□□□ 0.9
PDCD2-202ENST00000392090 NT5C1BQ96P26 610 aa20.68■□□□□ 0.9
PDCD2-202ENST00000392090 LINC00597Q9H2U6 94 aa20.68■□□□□ 0.9
PDCD2-202ENST00000392090 CCSER2Q9H7U1 834 aa20.68■□□□□ 0.9
PDCD2-202ENST00000392090 PNPLA8Q9NP80 782 aa20.68■□□□□ 0.9
PDCD2-202ENST00000392090 CFAP97Q9P2B7 532 aa20.68■□□□□ 0.9
PDCD2-202ENST00000392090 SLC9A3R1O14745 358 aaPredicted RBP20.67■□□□□ 0.9
PDCD2-202ENST00000392090 PMM2O15305 246 aa20.67■□□□□ 0.9
PDCD2-202ENST00000392090 NFATC1O95644 943 aa20.67■□□□□ 0.9
PDCD2-202ENST00000392090 GJA4P35212 333 aa20.67■□□□□ 0.9
PDCD2-202ENST00000392090 SLC8A3P57103 927 aa20.67■□□□□ 0.9
PDCD2-202ENST00000392090 TSSK4Q6SA08 328 aa20.67■□□□□ 0.9
PDCD2-202ENST00000392090 CREBRFQ8IUR6 639 aa20.67■□□□□ 0.9
PDCD2-202ENST00000392090 CLSTN2Q9H4D0 955 aa20.67■□□□□ 0.9
PDCD2-202ENST00000392090 PRMT8Q9NR22 394 aaPredicted RBP20.67■□□□□ 0.9
PDCD2-202ENST00000392090 RWDD2AQ9UIY3 292 aa20.67■□□□□ 0.9
PDCD2-202ENST00000392090 SCML2Q9UQR0 700 aa20.67■□□□□ 0.9
PDCD2-202ENST00000392090 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.67■□□□□ 0.9
PDCD2-202ENST00000392090 PRR23AA6NEV1 266 aa20.66■□□□□ 0.9
PDCD2-202ENST00000392090 HHLA1C9JL84 531 aa20.66■□□□□ 0.9
PDCD2-202ENST00000392090 SCAMP3O14828 347 aaKnown RBP20.66■□□□□ 0.9
PDCD2-202ENST00000392090 P4HA2O15460 535 aa20.66■□□□□ 0.9
PDCD2-202ENST00000392090 TLR5O60602 858 aa20.66■□□□□ 0.9
PDCD2-202ENST00000392090 ZDHHC11BP0C7U3 371 aa20.66■□□□□ 0.9
PDCD2-202ENST00000392090 CXCL12P48061 93 aa20.66■□□□□ 0.9
PDCD2-202ENST00000392090 KCNH2Q12809 1159 aa20.66■□□□□ 0.9
PDCD2-202ENST00000392090 CCINQ13939 588 aa20.66■□□□□ 0.9
PDCD2-202ENST00000392090 MAMSTRQ6ZN01 415 aa20.66■□□□□ 0.9
PDCD2-202ENST00000392090 Q6ZS52 159 aa20.66■□□□□ 0.9
PDCD2-202ENST00000392090 ASCL5Q7RTU5 278 aa20.66■□□□□ 0.9
PDCD2-202ENST00000392090 TRIM59Q8IWR1 403 aa20.66■□□□□ 0.9
PDCD2-202ENST00000392090 PPM1KQ8N3J5 372 aa20.66■□□□□ 0.9
PDCD2-202ENST00000392090 SYNPOQ8N3V7 929 aa20.66■□□□□ 0.9
PDCD2-202ENST00000392090 SPEM1Q8N4L4 309 aa20.66■□□□□ 0.9
PDCD2-202ENST00000392090 KIAA1958Q8N8K9 716 aa20.66■□□□□ 0.9
PDCD2-202ENST00000392090 SEMA4AQ9H3S1 761 aa20.66■□□□□ 0.9
PDCD2-202ENST00000392090 MYO16Q9Y6X6 1858 aa20.66■□□□□ 0.9
PDCD2-202ENST00000392090 FAM186AA6NE01 2351 aa20.66■□□□□ 0.9
PDCD2-202ENST00000392090 TRDMT1O14717 391 aaKnown RBP20.65■□□□□ 0.9
PDCD2-202ENST00000392090 CYP26A1O43174 497 aa20.65■□□□□ 0.9
PDCD2-202ENST00000392090 AFPP02771 609 aaKnown RBP20.65■□□□□ 0.9
PDCD2-202ENST00000392090 CD19P15391 556 aa20.65■□□□□ 0.9
PDCD2-202ENST00000392090 KIF11P52732 1056 aa20.65■□□□□ 0.9
PDCD2-202ENST00000392090 MARSP56192 900 aaKnown RBP20.65■□□□□ 0.9
PDCD2-202ENST00000392090 GAS6Q14393 721 aa20.65■□□□□ 0.9
PDCD2-202ENST00000392090 SGO2Q562F6 1265 aa20.65■□□□□ 0.9
PDCD2-202ENST00000392090 TMEM196Q5HYL7 178 aa20.65■□□□□ 0.9
PDCD2-202ENST00000392090 ARHGAP17Q68EM7 881 aa20.65■□□□□ 0.9
PDCD2-202ENST00000392090 MLKLQ8NB16 471 aa20.65■□□□□ 0.9
PDCD2-202ENST00000392090 ATRIPQ8WXE1 791 aa20.65■□□□□ 0.9
PDCD2-202ENST00000392090 P2RY13Q9BPV8 354 aa20.65■□□□□ 0.9
PDCD2-202ENST00000392090 SH3BP1Q9Y3L3 701 aa20.65■□□□□ 0.9
PDCD2-202ENST00000392090 WDR87Q6ZQQ6 2873 aa20.65■□□□□ 0.9
PDCD2-202ENST00000392090 ATG2BQ96BY7 2078 aa20.65■□□□□ 0.9
PDCD2-202ENST00000392090 E2F8A0AVK6 867 aa20.64■□□□□ 0.89
PDCD2-202ENST00000392090 DRD1P21728 446 aa20.64■□□□□ 0.89
PDCD2-202ENST00000392090 PGFP49763 221 aa20.64■□□□□ 0.89
PDCD2-202ENST00000392090 GALK1P51570 392 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms