RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 TMEM165Q9HC07 324 aa12.63□□□□□ -0.39
CAPRIN1-202ENST00000389645 GGA2Q9UJY4 613 aa12.63□□□□□ -0.39
CAPRIN1-202ENST00000389645 STRIP2Q9ULQ0 834 aa12.63□□□□□ -0.39
CAPRIN1-202ENST00000389645 GAS2O43903 313 aaKnown RBP12.62□□□□□ -0.39
CAPRIN1-202ENST00000389645 INHBAP08476 426 aa12.62□□□□□ -0.39
CAPRIN1-202ENST00000389645 ZNF865P0CJ78 1059 aaPredicted RBP12.62□□□□□ -0.39
CAPRIN1-202ENST00000389645 MIPP30301 263 aa12.62□□□□□ -0.39
CAPRIN1-202ENST00000389645 PREPLQ4J6C6 727 aaPredicted RBP12.62□□□□□ -0.39
CAPRIN1-202ENST00000389645 TLK2Q86UE8 772 aa12.62□□□□□ -0.39
CAPRIN1-202ENST00000389645 UNC45BQ8IWX7 931 aa12.62□□□□□ -0.39
CAPRIN1-202ENST00000389645 ALLCQ8N6M5 410 aa12.62□□□□□ -0.39
CAPRIN1-202ENST00000389645 PPM1NQ8N819 430 aa12.62□□□□□ -0.39
CAPRIN1-202ENST00000389645 EMID1Q96A84 441 aaPredicted RBP12.62□□□□□ -0.39
CAPRIN1-202ENST00000389645 LRRC37BQ96QE4 947 aa12.62□□□□□ -0.39
CAPRIN1-202ENST00000389645 C2orf40Q9H1Z8 148 aa12.62□□□□□ -0.39
CAPRIN1-202ENST00000389645 CDT1Q9H211 546 aa12.62□□□□□ -0.39
CAPRIN1-202ENST00000389645 MAGED2Q9UNF1 606 aaPredicted RBP12.62□□□□□ -0.39
CAPRIN1-202ENST00000389645 AVILO75366 819 aa12.62□□□□□ -0.39
CAPRIN1-202ENST00000389645 LRCH4O75427 683 aa12.62□□□□□ -0.39
CAPRIN1-202ENST00000389645 MT-ND3P03897 115 aa12.62□□□□□ -0.39
CAPRIN1-202ENST00000389645 STAG3L1P0CL83 205 aa12.62□□□□□ -0.39
CAPRIN1-202ENST00000389645 MCCD1P59942 119 aaPredicted RBP12.62□□□□□ -0.39
CAPRIN1-202ENST00000389645 MCL1Q07820 350 aa12.62□□□□□ -0.39
CAPRIN1-202ENST00000389645 JADE1Q6IE81 842 aa12.62□□□□□ -0.39
CAPRIN1-202ENST00000389645 TSHZ1Q6ZSZ6 1077 aa12.62□□□□□ -0.39
CAPRIN1-202ENST00000389645 CEP128Q6ZU80 1094 aa12.62□□□□□ -0.39
CAPRIN1-202ENST00000389645 EXOC8Q8IYI6 725 aa12.62□□□□□ -0.39
CAPRIN1-202ENST00000389645 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.62□□□□□ -0.39
CAPRIN1-202ENST00000389645 NETO2Q8NC67 525 aa12.62□□□□□ -0.39
CAPRIN1-202ENST00000389645 TWNKQ96RR1 684 aa12.62□□□□□ -0.39
CAPRIN1-202ENST00000389645 TMEM109Q9BVC6 243 aa12.62□□□□□ -0.39
CAPRIN1-202ENST00000389645 PTPRHQ9HD43 1115 aa12.62□□□□□ -0.39
CAPRIN1-202ENST00000389645 RAB6BQ9NRW1 208 aa12.62□□□□□ -0.39
CAPRIN1-202ENST00000389645 SLC5A4Q9NY91 659 aa12.62□□□□□ -0.39
CAPRIN1-202ENST00000389645 DDX56Q9NY93 547 aaKnown RBP12.62□□□□□ -0.39
CAPRIN1-202ENST00000389645 CPSF3Q9UKF6 684 aaKnown RBP12.62□□□□□ -0.39
CAPRIN1-202ENST00000389645 RPS6KL1Q9Y6S9 549 aa12.62□□□□□ -0.39
CAPRIN1-202ENST00000389645 LACTBL1A8MY62 500 aa12.61□□□□□ -0.39
CAPRIN1-202ENST00000389645 FAM155AB1AL88 458 aaPredicted RBP12.61□□□□□ -0.39
CAPRIN1-202ENST00000389645 KIF3CO14782 793 aa12.61□□□□□ -0.39
CAPRIN1-202ENST00000389645 APRTP07741 180 aa12.61□□□□□ -0.39
CAPRIN1-202ENST00000389645 WDR4P57081 412 aaKnown RBP12.61□□□□□ -0.39
CAPRIN1-202ENST00000389645 COPS2P61201 443 aa12.61□□□□□ -0.39
CAPRIN1-202ENST00000389645 TTC25Q96NG3 672 aa12.61□□□□□ -0.39
CAPRIN1-202ENST00000389645 HAO1Q9UJM8 370 aa12.61□□□□□ -0.39
CAPRIN1-202ENST00000389645 SNX9Q9Y5X1 595 aa12.61□□□□□ -0.39
CAPRIN1-202ENST00000389645 SLC10A3P09131 477 aa12.61□□□□□ -0.39
CAPRIN1-202ENST00000389645 ARF4P18085 180 aaPredicted RBP12.61□□□□□ -0.39
CAPRIN1-202ENST00000389645 ADRA1DP25100 572 aa12.61□□□□□ -0.39
CAPRIN1-202ENST00000389645 CDKN2BP42772 138 aa12.61□□□□□ -0.39
CAPRIN1-202ENST00000389645 PHKA2P46019 1235 aa12.61□□□□□ -0.39
CAPRIN1-202ENST00000389645 SESN3P58005 492 aa12.61□□□□□ -0.39
CAPRIN1-202ENST00000389645 PTPN11Q06124 597 aaPredicted RBP12.61□□□□□ -0.39
CAPRIN1-202ENST00000389645 FYB2Q5VWT5 728 aa12.61□□□□□ -0.39
CAPRIN1-202ENST00000389645 WDTC1Q8N5D0 677 aa12.61□□□□□ -0.39
CAPRIN1-202ENST00000389645 ATP11CQ8NB49 1132 aa12.61□□□□□ -0.39
CAPRIN1-202ENST00000389645 HPDLQ96IR7 371 aa12.61□□□□□ -0.39
CAPRIN1-202ENST00000389645 MAGEB18Q96M61 343 aa12.61□□□□□ -0.39
CAPRIN1-202ENST00000389645 SLC13A1Q9BZW2 595 aa12.61□□□□□ -0.39
CAPRIN1-202ENST00000389645 UBN1Q9NPG3 1134 aa12.61□□□□□ -0.39
CAPRIN1-202ENST00000389645 GJD2Q9UKL4 321 aa12.61□□□□□ -0.39
CAPRIN1-202ENST00000389645 USP18Q9UMW8 372 aa12.61□□□□□ -0.39
CAPRIN1-202ENST00000389645 GNEQ9Y223 722 aaKnown RBP12.61□□□□□ -0.39
CAPRIN1-202ENST00000389645 PPME1Q9Y570 386 aa12.61□□□□□ -0.39
CAPRIN1-202ENST00000389645 ATXN2Q99700 1313 aaKnown RBP12.61□□□□□ -0.39
CAPRIN1-202ENST00000389645 TCRBV7S3A2A0A539 114 aa12.61□□□□□ -0.39
CAPRIN1-202ENST00000389645 KCNN4O15554 427 aa12.61□□□□□ -0.39
CAPRIN1-202ENST00000389645 ATP6V1G2O95670 118 aa12.61□□□□□ -0.39
CAPRIN1-202ENST00000389645 MYL3P08590 195 aa12.61□□□□□ -0.39
CAPRIN1-202ENST00000389645 KLRC2P26717 231 aa12.61□□□□□ -0.39
CAPRIN1-202ENST00000389645 RANBP1P43487 201 aa12.61□□□□□ -0.39
CAPRIN1-202ENST00000389645 PTP4A2Q12974 167 aa12.61□□□□□ -0.39
CAPRIN1-202ENST00000389645 SURF1Q15526 300 aa12.61□□□□□ -0.39
CAPRIN1-202ENST00000389645 SLC1A5Q15758 541 aa12.61□□□□□ -0.39
CAPRIN1-202ENST00000389645 RAB6CQ53S08 254 aa12.61□□□□□ -0.39
CAPRIN1-202ENST00000389645 SLCO2A1Q92959 643 aa12.61□□□□□ -0.39
CAPRIN1-202ENST00000389645 STAMBPL1Q96FJ0 436 aa12.61□□□□□ -0.39
CAPRIN1-202ENST00000389645 KIF12Q96FN5 646 aa12.61□□□□□ -0.39
CAPRIN1-202ENST00000389645 PAFAH2Q99487 392 aa12.61□□□□□ -0.39
CAPRIN1-202ENST00000389645 RAB6CQ9H0N0 254 aa12.61□□□□□ -0.39
CAPRIN1-202ENST00000389645 CXCL16Q9H2A7 254 aa12.61□□□□□ -0.39
CAPRIN1-202ENST00000389645 PSMC3IPQ9P2W1 217 aaPredicted RBP12.61□□□□□ -0.39
CAPRIN1-202ENST00000389645 MAGEB2O15479 319 aa12.6□□□□□ -0.39
CAPRIN1-202ENST00000389645 ERBB2P04626 1255 aa12.6□□□□□ -0.39
CAPRIN1-202ENST00000389645 NQO1P15559 274 aaKnown RBP12.6□□□□□ -0.39
CAPRIN1-202ENST00000389645 TAC1P20366 129 aa12.6□□□□□ -0.39
CAPRIN1-202ENST00000389645 YY1P25490 414 aa12.6□□□□□ -0.39
CAPRIN1-202ENST00000389645 RPL22P35268 128 aaKnown RBP12.6□□□□□ -0.39
CAPRIN1-202ENST00000389645 AP3M2P53677 418 aa12.6□□□□□ -0.39
CAPRIN1-202ENST00000389645 MORF4L2Q15014 288 aa12.6□□□□□ -0.39
CAPRIN1-202ENST00000389645 FNBP1LQ5T0N5 605 aa12.6□□□□□ -0.39
CAPRIN1-202ENST00000389645 OR6B3Q8NGW1 331 aa12.6□□□□□ -0.39
CAPRIN1-202ENST00000389645 ZFYVE28Q9HCC9 887 aa12.6□□□□□ -0.39
CAPRIN1-202ENST00000389645 PIH1D1Q9NWS0 290 aaKnown RBP12.6□□□□□ -0.39
CAPRIN1-202ENST00000389645 CCDC195A0A1B0GUA6 201 aa12.6□□□□□ -0.39
CAPRIN1-202ENST00000389645 MICAL2O94851 1124 aa12.6□□□□□ -0.39
CAPRIN1-202ENST00000389645 ZBED1O96006 694 aa12.6□□□□□ -0.39
CAPRIN1-202ENST00000389645 PDGFRBP09619 1106 aa12.6□□□□□ -0.39
CAPRIN1-202ENST00000389645 P4HA1P13674 534 aa12.6□□□□□ -0.39
CAPRIN1-202ENST00000389645 PROZP22891 400 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms