RNA–Protein interactions for RNA: ENST00000381565.2

APOBEC3F-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3F, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-202ENST00000381565 ZXDBP98169 803 aa12.22□□□□□ -0.45
APOBEC3F-202ENST00000381565 IFRD2Q12894 506 aaPredicted RBP12.22□□□□□ -0.45
APOBEC3F-202ENST00000381565 TAF10Q12962 218 aa12.22□□□□□ -0.45
APOBEC3F-202ENST00000381565 ZNF268Q14587 947 aaPredicted RBP12.22□□□□□ -0.45
APOBEC3F-202ENST00000381565 ZNF77Q15935 545 aa12.22□□□□□ -0.45
APOBEC3F-202ENST00000381565 SLC44A4Q53GD3 710 aa12.22□□□□□ -0.45
APOBEC3F-202ENST00000381565 TPRG1Q6ZUI0 275 aa12.22□□□□□ -0.45
APOBEC3F-202ENST00000381565 NUP93Q8N1F7 819 aa12.22□□□□□ -0.45
APOBEC3F-202ENST00000381565 ZNF687Q8N1G0 1237 aa12.22□□□□□ -0.45
APOBEC3F-202ENST00000381565 DCLK2Q8N568 766 aa12.22□□□□□ -0.45
APOBEC3F-202ENST00000381565 CELF5Q8N6W0 485 aaKnown RBP12.22□□□□□ -0.45
APOBEC3F-202ENST00000381565 SUMF1Q8NBK3 374 aa12.22□□□□□ -0.45
APOBEC3F-202ENST00000381565 PJA1Q8NG27 643 aa12.22□□□□□ -0.45
APOBEC3F-202ENST00000381565 BPIFB1Q8TDL5 484 aa12.22□□□□□ -0.45
APOBEC3F-202ENST00000381565 IRF7Q92985 503 aa12.22□□□□□ -0.45
APOBEC3F-202ENST00000381565 CYFIP2Q96F07 1278 aa12.22□□□□□ -0.45
APOBEC3F-202ENST00000381565 TMEM176AQ96HP8 235 aa12.22□□□□□ -0.45
APOBEC3F-202ENST00000381565 CYP2S1Q96SQ9 504 aa12.22□□□□□ -0.45
APOBEC3F-202ENST00000381565 TRPV5Q9NQA5 729 aa12.22□□□□□ -0.45
APOBEC3F-202ENST00000381565 TDP1Q9NUW8 608 aa12.22□□□□□ -0.45
APOBEC3F-202ENST00000381565 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.22□□□□□ -0.45
APOBEC3F-202ENST00000381565 RTN3O95197 1032 aaPredicted RBP12.21□□□□□ -0.45
APOBEC3F-202ENST00000381565 CKMP06732 381 aa12.21□□□□□ -0.45
APOBEC3F-202ENST00000381565 FAM200BP0CF97 657 aa12.21□□□□□ -0.45
APOBEC3F-202ENST00000381565 CCDC192P0DO97 292 aa12.21□□□□□ -0.45
APOBEC3F-202ENST00000381565 CD72P21854 359 aa12.21□□□□□ -0.45
APOBEC3F-202ENST00000381565 TBXAS1P24557 533 aaPredicted RBP12.21□□□□□ -0.45
APOBEC3F-202ENST00000381565 YWHAQP27348 245 aa12.21□□□□□ -0.45
APOBEC3F-202ENST00000381565 PRKCQQ04759 706 aa12.21□□□□□ -0.45
APOBEC3F-202ENST00000381565 C1orf210Q8IVY1 113 aa12.21□□□□□ -0.45
APOBEC3F-202ENST00000381565 TTC39CQ8N584 583 aa12.21□□□□□ -0.45
APOBEC3F-202ENST00000381565 ARL14EPQ8N8R7 260 aaPredicted RBP12.21□□□□□ -0.45
APOBEC3F-202ENST00000381565 CHFRQ96EP1 664 aa12.21□□□□□ -0.45
APOBEC3F-202ENST00000381565 KREMEN1Q96MU8 473 aa12.21□□□□□ -0.45
APOBEC3F-202ENST00000381565 NT5C1BQ96P26 610 aa12.21□□□□□ -0.45
APOBEC3F-202ENST00000381565 RNF38Q9H0F5 515 aa12.21□□□□□ -0.45
APOBEC3F-202ENST00000381565 INTS2Q9H0H0 1204 aaKnown RBP12.21□□□□□ -0.45
APOBEC3F-202ENST00000381565 KIF9Q9HAQ2 790 aa12.21□□□□□ -0.45
APOBEC3F-202ENST00000381565 DLL3Q9NYJ7 618 aa12.21□□□□□ -0.45
APOBEC3F-202ENST00000381565 EHD2Q9NZN4 543 aa12.21□□□□□ -0.45
APOBEC3F-202ENST00000381565 SIT1Q9Y3P8 196 aa12.21□□□□□ -0.45
APOBEC3F-202ENST00000381565 MTF2Q9Y483 593 aaPredicted RBP12.21□□□□□ -0.45
APOBEC3F-202ENST00000381565 EML5Q05BV3 1969 aa12.21□□□□□ -0.46
APOBEC3F-202ENST00000381565 TRAV19A0A0A6YYK7 116 aa12.2□□□□□ -0.46
APOBEC3F-202ENST00000381565 KANSL1LA0AUZ9 987 aa12.2□□□□□ -0.46
APOBEC3F-202ENST00000381565 GOLGA6L22H0YM25 854 aa12.2□□□□□ -0.46
APOBEC3F-202ENST00000381565 DPYSL4O14531 572 aa12.2□□□□□ -0.46
APOBEC3F-202ENST00000381565 ZNF263O14978 683 aa12.2□□□□□ -0.46
APOBEC3F-202ENST00000381565 FGFR1OPO95684 399 aaKnown RBP12.2□□□□□ -0.46
APOBEC3F-202ENST00000381565 USP17L7P0C7H9 530 aa12.2□□□□□ -0.46
APOBEC3F-202ENST00000381565 ZDHHC11BP0C7U3 371 aa12.2□□□□□ -0.46
APOBEC3F-202ENST00000381565 TARSP26639 723 aaKnown RBP12.2□□□□□ -0.46
APOBEC3F-202ENST00000381565 ERCC5P28715 1186 aaPredicted RBP12.2□□□□□ -0.46
APOBEC3F-202ENST00000381565 SOX9P48436 509 aa12.2□□□□□ -0.46
APOBEC3F-202ENST00000381565 APBA1Q02410 837 aa12.2□□□□□ -0.46
APOBEC3F-202ENST00000381565 GCNT1Q02742 428 aa12.2□□□□□ -0.46
APOBEC3F-202ENST00000381565 TNK2Q07912 1038 aa12.2□□□□□ -0.46
APOBEC3F-202ENST00000381565 ARHGAP29Q52LW3 1261 aa12.2□□□□□ -0.46
APOBEC3F-202ENST00000381565 ARHGAP17Q68EM7 881 aa12.2□□□□□ -0.46
APOBEC3F-202ENST00000381565 C11orf57Q6ZUT1 292 aaPredicted RBP12.2□□□□□ -0.46
APOBEC3F-202ENST00000381565 DGLUCYQ7Z3D6 616 aa12.2□□□□□ -0.46
APOBEC3F-202ENST00000381565 TTC30AQ86WT1 665 aa12.2□□□□□ -0.46
APOBEC3F-202ENST00000381565 PPM1KQ8N3J5 372 aa12.2□□□□□ -0.46
APOBEC3F-202ENST00000381565 EHBP1Q8NDI1 1231 aa12.2□□□□□ -0.46
APOBEC3F-202ENST00000381565 OVCA2Q8WZ82 227 aa12.2□□□□□ -0.46
APOBEC3F-202ENST00000381565 FBXO32Q969P5 355 aa12.2□□□□□ -0.46
APOBEC3F-202ENST00000381565 JAKMIP2Q96AA8 810 aa12.2□□□□□ -0.46
APOBEC3F-202ENST00000381565 HEXIM2Q96MH2 286 aaKnown RBP12.2□□□□□ -0.46
APOBEC3F-202ENST00000381565 SLITRK1Q96PX8 696 aa12.2□□□□□ -0.46
APOBEC3F-202ENST00000381565 FAM83CQ9BQN1 747 aa12.2□□□□□ -0.46
APOBEC3F-202ENST00000381565 ZSWIM1Q9BR11 485 aa12.2□□□□□ -0.46
APOBEC3F-202ENST00000381565 DUSP16Q9BY84 665 aa12.2□□□□□ -0.46
APOBEC3F-202ENST00000381565 THAP9Q9H5L6 903 aa12.2□□□□□ -0.46
APOBEC3F-202ENST00000381565 PNPLA8Q9NP80 782 aa12.2□□□□□ -0.46
APOBEC3F-202ENST00000381565 LTB4R2Q9NPC1 389 aa12.2□□□□□ -0.46
APOBEC3F-202ENST00000381565 HPS4Q9NQG7 708 aa12.2□□□□□ -0.46
APOBEC3F-202ENST00000381565 GTSE1Q9NYZ3 720 aa12.2□□□□□ -0.46
APOBEC3F-202ENST00000381565 TRPM5Q9NZQ8 1165 aa12.2□□□□□ -0.46
APOBEC3F-202ENST00000381565 GMIPQ9P107 970 aa12.2□□□□□ -0.46
APOBEC3F-202ENST00000381565 ARHGAP26Q9UNA1 814 aa12.2□□□□□ -0.46
APOBEC3F-202ENST00000381565 PIAS3Q9Y6X2 628 aa12.2□□□□□ -0.46
APOBEC3F-202ENST00000381565 OTOL1A6NHN0 477 aaPredicted RBP12.19□□□□□ -0.46
APOBEC3F-202ENST00000381565 RNF225M0QZC1 329 aaPredicted RBP12.19□□□□□ -0.46
APOBEC3F-202ENST00000381565 CYP26A1O43174 497 aa12.19□□□□□ -0.46
APOBEC3F-202ENST00000381565 MBD3O95983 291 aa12.19□□□□□ -0.46
APOBEC3F-202ENST00000381565 CALCAP01258 141 aa12.19□□□□□ -0.46
APOBEC3F-202ENST00000381565 TCF3P15923 654 aa12.19□□□□□ -0.46
APOBEC3F-202ENST00000381565 PFKLP17858 780 aa12.19□□□□□ -0.46
APOBEC3F-202ENST00000381565 RFX1P22670 979 aa12.19□□□□□ -0.46
APOBEC3F-202ENST00000381565 PPP3CCP48454 512 aa12.19□□□□□ -0.46
APOBEC3F-202ENST00000381565 ZNF132P52740 706 aa12.19□□□□□ -0.46
APOBEC3F-202ENST00000381565 SLC7A9P82251 487 aa12.19□□□□□ -0.46
APOBEC3F-202ENST00000381565 FZD5Q13467 585 aa12.19□□□□□ -0.46
APOBEC3F-202ENST00000381565 MTF1Q14872 753 aa12.19□□□□□ -0.46
APOBEC3F-202ENST00000381565 GOLGA7BQ2TAP0 167 aa12.19□□□□□ -0.46
APOBEC3F-202ENST00000381565 HSP90AA4PQ58FG1 418 aa12.19□□□□□ -0.46
APOBEC3F-202ENST00000381565 MIIPQ5JXC2 388 aa12.19□□□□□ -0.46
APOBEC3F-202ENST00000381565 SNX30Q5VWJ9 437 aa12.19□□□□□ -0.46
APOBEC3F-202ENST00000381565 TRIM68Q6AZZ1 485 aa12.19□□□□□ -0.46
APOBEC3F-202ENST00000381565 TRIM65Q6PJ69 517 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms