RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 LEXMQ3ZCV2 418 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 PRSS36Q5K4E3 855 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 CYP4A22Q5TCH4 519 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 TRIM72Q6ZMU5 477 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 PDZD4Q76G19 769 aaPredicted RBP13.34□□□□□ -0.27
SMN1-202ENST00000380707 TMEM110Q86TL2 294 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 SCUBE3Q8IX30 993 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 SLC30A5Q8TAD4 765 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.34□□□□□ -0.27
SMN1-202ENST00000380707 NDRG1Q92597 394 aaKnown RBP13.34□□□□□ -0.27
SMN1-202ENST00000380707 RIPOR3Q96MK2 946 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 CHP1Q99653 195 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 FBXO44Q9H4M3 255 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 LRRC4Q9HBW1 653 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 COMMD8Q9NX08 183 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 EHD2Q9NZN4 543 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 CHORDC1Q9UHD1 332 aaPredicted RBP13.34□□□□□ -0.27
SMN1-202ENST00000380707 ADAMTS1Q9UHI8 967 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 A0A1W2PRU2 124 aa13.33□□□□□ -0.28
SMN1-202ENST00000380707 MBTPS2O43462 519 aa13.33□□□□□ -0.28
SMN1-202ENST00000380707 MOSPD3O75425 235 aa13.33□□□□□ -0.28
SMN1-202ENST00000380707 TADA3O75528 432 aa13.33□□□□□ -0.28
SMN1-202ENST00000380707 ZBED1O96006 694 aa13.33□□□□□ -0.28
SMN1-202ENST00000380707 GJA1P17302 382 aa13.33□□□□□ -0.28
SMN1-202ENST00000380707 GABRR2P28476 465 aa13.33□□□□□ -0.28
SMN1-202ENST00000380707 EIF4A3P38919 411 aaKnown RBP13.33□□□□□ -0.28
SMN1-202ENST00000380707 MTHFRP42898 656 aa13.33□□□□□ -0.28
SMN1-202ENST00000380707 CENPCQ03188 943 aa13.33□□□□□ -0.28
SMN1-202ENST00000380707 SMAD4Q13485 552 aaKnown RBP13.33□□□□□ -0.28
SMN1-202ENST00000380707 CBX2Q14781 532 aaPredicted RBP13.33□□□□□ -0.28
SMN1-202ENST00000380707 PTPN20Q4JDL3 420 aa13.33□□□□□ -0.28
SMN1-202ENST00000380707 C2CD6Q53TS8 623 aa13.33□□□□□ -0.28
SMN1-202ENST00000380707 PM20D1Q6GTS8 502 aa13.33□□□□□ -0.28
SMN1-202ENST00000380707 SIX6OS1Q8N1H7 587 aa13.33□□□□□ -0.28
SMN1-202ENST00000380707 LEMD2Q8NC56 503 aa13.33□□□□□ -0.28
SMN1-202ENST00000380707 ITFG1Q8TB96 612 aa13.33□□□□□ -0.28
SMN1-202ENST00000380707 SHKBP1Q8TBC3 707 aa13.33□□□□□ -0.28
SMN1-202ENST00000380707 CLEC4CQ8WTT0 213 aa13.33□□□□□ -0.28
SMN1-202ENST00000380707 FBXO32Q969P5 355 aa13.33□□□□□ -0.28
SMN1-202ENST00000380707 NOX5Q96PH1 765 aa13.33□□□□□ -0.28
SMN1-202ENST00000380707 PANX2Q96RD6 677 aa13.33□□□□□ -0.28
SMN1-202ENST00000380707 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.33□□□□□ -0.28
SMN1-202ENST00000380707 ULBP1Q9BZM6 244 aa13.33□□□□□ -0.28
SMN1-202ENST00000380707 POMKQ9H5K3 350 aa13.33□□□□□ -0.28
SMN1-202ENST00000380707 CYLDQ9NQC7 956 aa13.33□□□□□ -0.28
SMN1-202ENST00000380707 AVENQ9NQS1 362 aaPredicted RBP13.33□□□□□ -0.28
SMN1-202ENST00000380707 TAS2R14Q9NYV8 317 aa13.33□□□□□ -0.28
SMN1-202ENST00000380707 UXTQ9UBK9 157 aaPredicted RBP13.33□□□□□ -0.28
SMN1-202ENST00000380707 SCML2Q9UQR0 700 aa13.33□□□□□ -0.28
SMN1-202ENST00000380707 CLUHO75153 1309 aa13.32□□□□□ -0.28
SMN1-202ENST00000380707 ZNF638Q14966 1978 aaKnown RBP13.32□□□□□ -0.28
SMN1-202ENST00000380707 PAPSS1O43252 624 aaPredicted RBP13.32□□□□□ -0.28
SMN1-202ENST00000380707 ERBB2P04626 1255 aa13.32□□□□□ -0.28
SMN1-202ENST00000380707 ACADSBP45954 432 aa13.32□□□□□ -0.28
SMN1-202ENST00000380707 CDK17Q00537 523 aa13.32□□□□□ -0.28
SMN1-202ENST00000380707 ASTE1Q2TB18 679 aaPredicted RBP13.32□□□□□ -0.28
SMN1-202ENST00000380707 BHLHA9Q7RTU4 235 aa13.32□□□□□ -0.28
SMN1-202ENST00000380707 CCDC186Q7Z3E2 898 aa13.32□□□□□ -0.28
SMN1-202ENST00000380707 ERICH1Q86X53 443 aa13.32□□□□□ -0.28
SMN1-202ENST00000380707 DNAAF5Q86Y56 855 aa13.32□□□□□ -0.28
SMN1-202ENST00000380707 SLITRK1Q96PX8 696 aa13.32□□□□□ -0.28
SMN1-202ENST00000380707 MIS12Q9H081 205 aa13.32□□□□□ -0.28
SMN1-202ENST00000380707 ATXN3LQ9H3M9 355 aa13.32□□□□□ -0.28
SMN1-202ENST00000380707 NHEJ1Q9H9Q4 299 aaPredicted RBP13.32□□□□□ -0.28
SMN1-202ENST00000380707 CNGB3Q9NQW8 809 aa13.32□□□□□ -0.28
SMN1-202ENST00000380707 GMIPQ9P107 970 aa13.32□□□□□ -0.28
SMN1-202ENST00000380707 MRPS23Q9Y3D9 190 aaKnown RBP13.32□□□□□ -0.28
SMN1-202ENST00000380707 A0A087X0T9 212 aa13.31□□□□□ -0.28
SMN1-202ENST00000380707 ZNF840PA6NDX5 716 aa13.31□□□□□ -0.28
SMN1-202ENST00000380707 YJEFN3A6XGL0 299 aa13.31□□□□□ -0.28
SMN1-202ENST00000380707 TMCO5BA8MYB1 307 aa13.31□□□□□ -0.28
SMN1-202ENST00000380707 E7ENQ6 273 aa13.31□□□□□ -0.28
SMN1-202ENST00000380707 ZNF197O14709 1029 aa13.31□□□□□ -0.28
SMN1-202ENST00000380707 ABCB7O75027 752 aa13.31□□□□□ -0.28
SMN1-202ENST00000380707 FGF19O95750 216 aa13.31□□□□□ -0.28
SMN1-202ENST00000380707 ZDHHC11BP0C7U3 371 aa13.31□□□□□ -0.28
SMN1-202ENST00000380707 FAM228BP0C875 321 aa13.31□□□□□ -0.28
SMN1-202ENST00000380707 CEBPBP17676 345 aa13.31□□□□□ -0.28
SMN1-202ENST00000380707 MMP8P22894 467 aa13.31□□□□□ -0.28
SMN1-202ENST00000380707 FSHRP23945 695 aa13.31□□□□□ -0.28
SMN1-202ENST00000380707 CDC25CP30307 473 aa13.31□□□□□ -0.28
SMN1-202ENST00000380707 NSFP46459 744 aaKnown RBP13.31□□□□□ -0.28
SMN1-202ENST00000380707 GABRB2P47870 512 aa13.31□□□□□ -0.28
SMN1-202ENST00000380707 DAOAP59103 153 aa13.31□□□□□ -0.28
SMN1-202ENST00000380707 CYP4F8P98187 520 aa13.31□□□□□ -0.28
SMN1-202ENST00000380707 STXBP5Q5T5C0 1151 aa13.31□□□□□ -0.28
SMN1-202ENST00000380707 PTCRAQ6ISU1 281 aaPredicted RBP13.31□□□□□ -0.28
SMN1-202ENST00000380707 ACAD10Q6JQN1 1059 aa13.31□□□□□ -0.28
SMN1-202ENST00000380707 MMS22LQ6ZRQ5 1243 aa13.31□□□□□ -0.28
SMN1-202ENST00000380707 SCD5Q86SK9 330 aa13.31□□□□□ -0.28
SMN1-202ENST00000380707 VPS36Q86VN1 386 aa13.31□□□□□ -0.28
SMN1-202ENST00000380707 ING5Q8WYH8 240 aa13.31□□□□□ -0.28
SMN1-202ENST00000380707 OVCA2Q8WZ82 227 aa13.31□□□□□ -0.28
SMN1-202ENST00000380707 NECTIN4Q96NY8 510 aa13.31□□□□□ -0.28
SMN1-202ENST00000380707 SYNCQ9H7C4 482 aa13.31□□□□□ -0.28
SMN1-202ENST00000380707 NMUR1Q9HB89 426 aa13.31□□□□□ -0.28
SMN1-202ENST00000380707 OSER1Q9NX31 292 aa13.31□□□□□ -0.28
SMN1-202ENST00000380707 TRPM5Q9NZQ8 1165 aa13.31□□□□□ -0.28
SMN1-202ENST00000380707 A0A1W2PQH9 124 aa13.3□□□□□ -0.28
SMN1-202ENST00000380707 SSU72P8A0A1W2PR75 194 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms