RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 RPS6KL1Q9Y6S9 549 aa17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 TULP4Q9NRJ4 1543 aa17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 KRT87PA6NCN2 255 aa17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 SNX3O60493 162 aa17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 NNMTP40261 264 aa17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 TOB1P50616 345 aaPredicted RBP17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 NCF4Q15080 339 aa17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 FAM196AQ6ZSG2 479 aa17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 RTKN2Q8IZC4 609 aa17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 TSEN2Q8NCE0 465 aaKnown RBP17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 USP33Q8TEY7 942 aa17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 MASTLQ96GX5 879 aa17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 GPR101Q96P66 508 aaPredicted RBP17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 RAD54BQ9Y620 910 aa17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 SLC30A1Q9Y6M5 507 aa17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 CYP11B2P19099 503 aa17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 RRM2P31350 389 aa17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 PRKAA1Q13131 559 aa17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 ERMARDQ5T6L9 678 aa17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 MTMR8Q96EF0 704 aa17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 SPON2Q9BUD6 331 aa17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 CEP44Q9C0F1 390 aa17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 TRPC7Q9HCX4 862 aa17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 AAR2Q9Y312 384 aaKnown RBP17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 DYTNA2CJ06 578 aa17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 RHOBTB1O94844 696 aa17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 LSM8O95777 96 aaKnown RBP17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 PTPN7P35236 360 aa17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 LRRC74AQ0VAA2 488 aa17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 MYBPC2Q14324 1141 aa17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 RGS21Q2M5E4 152 aa17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 SYTL3Q4VX76 610 aa17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 THEMIS2Q5TEJ8 643 aa17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 KDELC2Q7Z4H8 507 aa17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 CCDC28BQ9BUN5 200 aa17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 DNAJC5BQ9UF47 199 aa17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 MAGEB2O15479 319 aa17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 RARBP10826 455 aa17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 GOLGA7BQ2TAP0 167 aa17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 IPMKQ8NFU5 416 aa17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 TLR10Q9BXR5 811 aa17.65■□□□□ 0.42
COL4A3BP-203ENST00000380494 ATP6V1B2P21281 511 aa17.64■□□□□ 0.41
COL4A3BP-203ENST00000380494 GTF2H3Q13889 308 aa17.64■□□□□ 0.41
COL4A3BP-203ENST00000380494 FAM98BQ52LJ0 330 aaKnown RBP17.64■□□□□ 0.41
COL4A3BP-203ENST00000380494 PRCCQ92733 491 aaPredicted RBP17.64■□□□□ 0.41
COL4A3BP-203ENST00000380494 SPATA33Q96N06 139 aa17.64■□□□□ 0.41
COL4A3BP-203ENST00000380494 KRCC1Q9NPI7 259 aaPredicted RBP17.64■□□□□ 0.41
COL4A3BP-203ENST00000380494 UBDO15205 165 aa17.64■□□□□ 0.41
COL4A3BP-203ENST00000380494 RPS6KA4O75676 772 aa17.64■□□□□ 0.41
COL4A3BP-203ENST00000380494 MYL3P08590 195 aa17.64■□□□□ 0.41
COL4A3BP-203ENST00000380494 SOX11P35716 441 aa17.64■□□□□ 0.41
COL4A3BP-203ENST00000380494 XIAPP98170 497 aa17.64■□□□□ 0.41
COL4A3BP-203ENST00000380494 ARMC3Q5W041 872 aa17.64■□□□□ 0.41
COL4A3BP-203ENST00000380494 SYNE4Q8N205 404 aa17.64■□□□□ 0.41
COL4A3BP-203ENST00000380494 TCP10LQ8TDR4 215 aa17.64■□□□□ 0.41
COL4A3BP-203ENST00000380494 CD4P01730 458 aa17.64■□□□□ 0.41
COL4A3BP-203ENST00000380494 ME2P23368 584 aa17.64■□□□□ 0.41
COL4A3BP-203ENST00000380494 SKIV2L2P42285 1042 aaKnown RBP17.64■□□□□ 0.41
COL4A3BP-203ENST00000380494 CLEC16AQ2KHT3 1053 aa17.64■□□□□ 0.41
COL4A3BP-203ENST00000380494 DENND5BQ6ZUT9 1274 aa17.64■□□□□ 0.41
COL4A3BP-203ENST00000380494 HDAC7Q8WUI4 952 aa17.64■□□□□ 0.41
COL4A3BP-203ENST00000380494 LENG1Q96BZ8 264 aaPredicted RBP17.64■□□□□ 0.41
COL4A3BP-203ENST00000380494 TPRKBQ9Y3C4 175 aa17.64■□□□□ 0.41
COL4A3BP-203ENST00000380494 RNF17Q9BXT8 1623 aaKnown RBP17.64■□□□□ 0.41
COL4A3BP-203ENST00000380494 CLOCKO15516 846 aa17.64■□□□□ 0.41
COL4A3BP-203ENST00000380494 PTDSS1P48651 473 aaKnown RBP17.64■□□□□ 0.41
COL4A3BP-203ENST00000380494 IFI35P80217 286 aaPredicted RBP17.64■□□□□ 0.41
COL4A3BP-203ENST00000380494 GINS4Q9BRT9 223 aa17.64■□□□□ 0.41
COL4A3BP-203ENST00000380494 VTA1Q9NP79 307 aa17.64■□□□□ 0.41
COL4A3BP-203ENST00000380494 CACNA2D2Q9NY47 1150 aa17.64■□□□□ 0.41
COL4A3BP-203ENST00000380494 TBX20Q9UMR3 447 aa17.64■□□□□ 0.41
COL4A3BP-203ENST00000380494 KDM6AO15550 1401 aaPredicted RBP17.64■□□□□ 0.41
COL4A3BP-203ENST00000380494 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.63■□□□□ 0.41
COL4A3BP-203ENST00000380494 SUPT7LO94864 414 aa17.63■□□□□ 0.41
COL4A3BP-203ENST00000380494 STAT5BP51692 787 aa17.63■□□□□ 0.41
COL4A3BP-203ENST00000380494 TOP3AQ13472 1001 aaPredicted RBP17.63■□□□□ 0.41
COL4A3BP-203ENST00000380494 TKFCQ3LXA3 575 aa17.63■□□□□ 0.41
COL4A3BP-203ENST00000380494 GRTP1Q5TC63 336 aa17.63■□□□□ 0.41
COL4A3BP-203ENST00000380494 SLC25A41Q8N5S1 370 aa17.63■□□□□ 0.41
COL4A3BP-203ENST00000380494 OSGEPQ9NPF4 335 aa17.63■□□□□ 0.41
COL4A3BP-203ENST00000380494 NARFQ9UHQ1 456 aa17.63■□□□□ 0.41
COL4A3BP-203ENST00000380494 ANKRD6Q9Y2G4 727 aa17.63■□□□□ 0.41
COL4A3BP-203ENST00000380494 FLT1P17948 1338 aa17.63■□□□□ 0.41
COL4A3BP-203ENST00000380494 CBFA2T3O75081 653 aa17.63■□□□□ 0.41
COL4A3BP-203ENST00000380494 CSF1RP07333 972 aa17.63■□□□□ 0.41
COL4A3BP-203ENST00000380494 RXRGP48443 463 aa17.63■□□□□ 0.41
COL4A3BP-203ENST00000380494 CYP4A22Q5TCH4 519 aa17.63■□□□□ 0.41
COL4A3BP-203ENST00000380494 RINLQ6ZS11 566 aa17.63■□□□□ 0.41
COL4A3BP-203ENST00000380494 ST13P5Q8NFI4 369 aaPredicted RBP17.63■□□□□ 0.41
COL4A3BP-203ENST00000380494 CELF1Q92879 486 aaKnown RBP17.63■□□□□ 0.41
COL4A3BP-203ENST00000380494 TUBA8Q9NY65 449 aaPredicted RBP17.63■□□□□ 0.41
COL4A3BP-203ENST00000380494 CROTQ9UKG9 612 aa17.63■□□□□ 0.41
COL4A3BP-203ENST00000380494 DRG1Q9Y295 367 aaKnown RBP17.63■□□□□ 0.41
COL4A3BP-203ENST00000380494 NR5A2O00482 541 aa17.63■□□□□ 0.41
COL4A3BP-203ENST00000380494 SMNDC1O75940 238 aaKnown RBP eCLIP17.63■□□□□ 0.41
COL4A3BP-203ENST00000380494 PGK2P07205 417 aa17.63■□□□□ 0.41
COL4A3BP-203ENST00000380494 STKLD1Q8NE28 680 aa17.63■□□□□ 0.41
COL4A3BP-203ENST00000380494 GANQ9H2C0 597 aa17.63■□□□□ 0.41
COL4A3BP-203ENST00000380494 FARP1Q9Y4F1 1045 aaPredicted RBP17.63■□□□□ 0.41
COL4A3BP-203ENST00000380494 DLC1Q96QB1 1528 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms