RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 GMPRP36959 345 aa12.98□□□□□ -0.33
PRPF40B-202ENST00000380281 FAAP100Q0VG06 881 aa12.98□□□□□ -0.33
PRPF40B-202ENST00000380281 MAP7Q14244 749 aa12.98□□□□□ -0.33
PRPF40B-202ENST00000380281 KBTBD12Q3ZCT8 623 aa12.98□□□□□ -0.33
PRPF40B-202ENST00000380281 TFDP3Q5H9I0 405 aa12.98□□□□□ -0.33
PRPF40B-202ENST00000380281 RNF168Q8IYW5 571 aaPredicted RBP12.98□□□□□ -0.33
PRPF40B-202ENST00000380281 RCOR2Q8IZ40 523 aa12.98□□□□□ -0.33
PRPF40B-202ENST00000380281 ALLCQ8N6M5 410 aa12.98□□□□□ -0.33
PRPF40B-202ENST00000380281 BBOF1Q8ND07 529 aa12.98□□□□□ -0.33
PRPF40B-202ENST00000380281 SPATA18Q8TC71 538 aa12.98□□□□□ -0.33
PRPF40B-202ENST00000380281 C10orf82Q8WW14 230 aa12.98□□□□□ -0.33
PRPF40B-202ENST00000380281 TRIM11Q96F44 468 aa12.98□□□□□ -0.33
PRPF40B-202ENST00000380281 CLPTM1LQ96KA5 538 aa12.98□□□□□ -0.33
PRPF40B-202ENST00000380281 ARHGEF38Q9NXL2 777 aa12.98□□□□□ -0.33
PRPF40B-202ENST00000380281 PSMC3IPQ9P2W1 217 aaPredicted RBP12.98□□□□□ -0.33
PRPF40B-202ENST00000380281 STARD13Q9Y3M8 1113 aa12.98□□□□□ -0.33
PRPF40B-202ENST00000380281 ZNF711Q9Y462 761 aa12.98□□□□□ -0.33
PRPF40B-202ENST00000380281 SCINQ9Y6U3 715 aa12.98□□□□□ -0.33
PRPF40B-202ENST00000380281 TMEM191CA6NGB0 347 aa12.98□□□□□ -0.33
PRPF40B-202ENST00000380281 SPDYE16A6NNV3 312 aaPredicted RBP12.98□□□□□ -0.33
PRPF40B-202ENST00000380281 B4GALT5O43286 388 aa12.98□□□□□ -0.33
PRPF40B-202ENST00000380281 UGT1A9O60656 530 aa12.98□□□□□ -0.33
PRPF40B-202ENST00000380281 STK10O94804 968 aaKnown RBP12.98□□□□□ -0.33
PRPF40B-202ENST00000380281 PGM3O95394 542 aa12.98□□□□□ -0.33
PRPF40B-202ENST00000380281 ITGBL1O95965 494 aaPredicted RBP12.98□□□□□ -0.33
PRPF40B-202ENST00000380281 EIF3EP60228 445 aaKnown RBP12.98□□□□□ -0.33
PRPF40B-202ENST00000380281 EN1Q05925 392 aaPredicted RBP12.98□□□□□ -0.33
PRPF40B-202ENST00000380281 C15orf59Q2T9L4 293 aaPredicted RBP12.98□□□□□ -0.33
PRPF40B-202ENST00000380281 MFSD4BQ5TF39 518 aa12.98□□□□□ -0.33
PRPF40B-202ENST00000380281 PLEKHA7Q6IQ23 1121 aa12.98□□□□□ -0.33
PRPF40B-202ENST00000380281 CLNKQ7Z7G1 428 aa12.98□□□□□ -0.33
PRPF40B-202ENST00000380281 KCTD17Q8N5Z5 321 aa12.98□□□□□ -0.33
PRPF40B-202ENST00000380281 TMEM35BQ8NCS4 154 aa12.98□□□□□ -0.33
PRPF40B-202ENST00000380281 NSUN6Q8TEA1 469 aaKnown RBP12.98□□□□□ -0.33
PRPF40B-202ENST00000380281 FBXL18Q96ME1 805 aa12.98□□□□□ -0.33
PRPF40B-202ENST00000380281 ACAP3Q96P50 834 aa12.98□□□□□ -0.33
PRPF40B-202ENST00000380281 UGT1A7Q9HAW7 530 aa12.98□□□□□ -0.33
PRPF40B-202ENST00000380281 UGT1A10Q9HAW8 530 aa12.98□□□□□ -0.33
PRPF40B-202ENST00000380281 UGT1A8Q9HAW9 530 aa12.98□□□□□ -0.33
PRPF40B-202ENST00000380281 ATP8B3O60423 1300 aa12.98□□□□□ -0.33
PRPF40B-202ENST00000380281 ATAD5Q96QE3 1844 aa12.98□□□□□ -0.33
PRPF40B-202ENST00000380281 hCG_1818297A0A087WSY0 165 aa12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 ENO1P06733 434 aaKnown RBP12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 TROVE2P10155 538 aaKnown RBP eCLIP12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 KCNA2P16389 499 aa12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 MMP8P22894 467 aa12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 ZNF699Q32M78 642 aa12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 ALYREFQ86V81 257 aaKnown RBP12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 EFCAB3Q8N7B9 438 aa12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 CPT1BQ92523 772 aa12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 MAGEB5Q9BZ81 275 aa12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 MYOZ2Q9NPC6 264 aa12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 NGRNQ9NPE2 291 aaKnown RBP12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 STX18Q9P2W9 335 aaKnown RBP12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 HMGXB4Q9UGU5 601 aa12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 INHBAP08476 426 aa12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 GEMIN4P57678 1058 aaKnown RBP12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 PSMD6Q15008 389 aa12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 PTPN20Q4JDL3 420 aa12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 RNASEH2BQ5TBB1 312 aaKnown RBP12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 MAP7D3Q8IWC1 876 aa12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 PDIK1LQ8N165 341 aa12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 SAMD3Q8N6K7 520 aa12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 JDP2Q8WYK2 163 aa12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 RILPQ96NA2 401 aa12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 BTBD10Q9BSF8 475 aa12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 EBF3Q9H4W6 596 aa12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 MANSC1Q9H8J5 431 aa12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 ACSS2Q9NR19 701 aa12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 SYNJ2BP-COX16A0A087WUM0 186 aa12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 KBTBD13C9JR72 458 aa12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 DPEP1P16444 411 aa12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 GARTP22102 1010 aa12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 ARFIP2P53365 341 aa12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 CDH6P55285 790 aa12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 ARL4CP56559 192 aa12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 HPCAP84074 193 aa12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 PTK7Q13308 1070 aa12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 RINLQ6ZS11 566 aa12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 SYDE1Q6ZW31 735 aaPredicted RBP12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 ENOSF1Q7L5Y1 443 aa12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 PRPF39Q86UA1 669 aaKnown RBP12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 WDTC1Q8N5D0 677 aa12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 PGLYRP2Q96PD5 576 aa12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 SLX1AQ9BQ83 275 aa12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 TSSK1BQ9BXA7 367 aa12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 CEP41Q9BYV8 373 aa12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 R3HDMLQ9H3Y0 253 aa12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 DNAJC5Q9H3Z4 198 aa12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 RAB6BQ9NRW1 208 aa12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 COX16Q9P0S2 106 aa12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 ARHGAP28Q9P2N2 729 aa12.97□□□□□ -0.33
PRPF40B-202ENST00000380281 BOLA2-SMG1P6H3BVE0 249 aa12.96□□□□□ -0.33
PRPF40B-202ENST00000380281 TPD52L2O43399 206 aaKnown RBP12.96□□□□□ -0.33
PRPF40B-202ENST00000380281 APRTP07741 180 aa12.96□□□□□ -0.33
PRPF40B-202ENST00000380281 MYL2P10916 166 aa12.96□□□□□ -0.33
PRPF40B-202ENST00000380281 CDKN2BP42772 138 aa12.96□□□□□ -0.33
PRPF40B-202ENST00000380281 CRADDP78560 199 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms