RNA–Protein interactions for RNA: ENST00000378961.8

CHGB-201, Transcript of chromogranin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHGB, Length 2,550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGB-201ENST00000378961 DHDDSQ86SQ9 333 aa13.26□□□□□ -0.29
CHGB-201ENST00000378961 VSIG10LQ86VR7 867 aa13.26□□□□□ -0.29
CHGB-201ENST00000378961 TMPRSS6Q8IU80 811 aa13.26□□□□□ -0.29
CHGB-201ENST00000378961 NME8Q8N427 588 aa13.26□□□□□ -0.29
CHGB-201ENST00000378961 SMC1BQ8NDV3 1235 aa13.26□□□□□ -0.29
CHGB-201ENST00000378961 HELQQ8TDG4 1101 aa13.26□□□□□ -0.29
CHGB-201ENST00000378961 NSUN6Q8TEA1 469 aaKnown RBP13.26□□□□□ -0.29
CHGB-201ENST00000378961 DCAKDQ8WVC6 231 aa13.26□□□□□ -0.29
CHGB-201ENST00000378961 PRPF31Q8WWY3 499 aaKnown RBP13.26□□□□□ -0.29
CHGB-201ENST00000378961 SHC3Q92529 594 aa13.26□□□□□ -0.29
CHGB-201ENST00000378961 OLFM3Q96PB7 478 aa13.26□□□□□ -0.29
CHGB-201ENST00000378961 HOXC10Q9NYD6 342 aa13.26□□□□□ -0.29
CHGB-201ENST00000378961 DOCK1Q14185 1865 aa13.25□□□□□ -0.29
CHGB-201ENST00000378961 A0A088AWK7 358 aa13.25□□□□□ -0.29
CHGB-201ENST00000378961 SPECC1L-ADORA2AF8WAN1 911 aa13.25□□□□□ -0.29
CHGB-201ENST00000378961 ALOX15BO15296 676 aa13.25□□□□□ -0.29
CHGB-201ENST00000378961 SFNP31947 248 aa13.25□□□□□ -0.29
CHGB-201ENST00000378961 MAN1A1P33908 653 aa13.25□□□□□ -0.29
CHGB-201ENST00000378961 RPL7AP62424 266 aaKnown RBP13.25□□□□□ -0.29
CHGB-201ENST00000378961 CENPCQ03188 943 aa13.25□□□□□ -0.29
CHGB-201ENST00000378961 HIF1AQ16665 826 aa13.25□□□□□ -0.29
CHGB-201ENST00000378961 XKR9Q5GH70 373 aa13.25□□□□□ -0.29
CHGB-201ENST00000378961 PPP6R3Q5H9R7 873 aaPredicted RBP13.25□□□□□ -0.29
CHGB-201ENST00000378961 XRRA1Q6P2D8 792 aa13.25□□□□□ -0.29
CHGB-201ENST00000378961 CENPUQ71F23 418 aa13.25□□□□□ -0.29
CHGB-201ENST00000378961 NET1Q7Z628 596 aaPredicted RBP13.25□□□□□ -0.29
CHGB-201ENST00000378961 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.25□□□□□ -0.29
CHGB-201ENST00000378961 REPS2Q8NFH8 660 aa13.25□□□□□ -0.29
CHGB-201ENST00000378961 PIP4K2CQ8TBX8 421 aa13.25□□□□□ -0.29
CHGB-201ENST00000378961 TRIM56Q9BRZ2 755 aaKnown RBP13.25□□□□□ -0.29
CHGB-201ENST00000378961 TEX13BQ9BXU2 312 aa13.25□□□□□ -0.29
CHGB-201ENST00000378961 S100A14Q9HCY8 104 aa13.25□□□□□ -0.29
CHGB-201ENST00000378961 UBAP1Q9NZ09 502 aa13.25□□□□□ -0.29
CHGB-201ENST00000378961 ZNF214Q9UL59 606 aaPredicted RBP13.25□□□□□ -0.29
CHGB-201ENST00000378961 UTRNP46939 3433 aa13.25□□□□□ -0.29
CHGB-201ENST00000378961 DNAJC6O75061 913 aa13.25□□□□□ -0.29
CHGB-201ENST00000378961 AVILO75366 819 aa13.25□□□□□ -0.29
CHGB-201ENST00000378961 CDK4P11802 303 aa13.25□□□□□ -0.29
CHGB-201ENST00000378961 UQCRBP14927 111 aa13.25□□□□□ -0.29
CHGB-201ENST00000378961 CD1EP15812 388 aa13.25□□□□□ -0.29
CHGB-201ENST00000378961 NELFEP18615 380 aaKnown RBP13.25□□□□□ -0.29
CHGB-201ENST00000378961 MSX2P35548 267 aaPredicted RBP13.25□□□□□ -0.29
CHGB-201ENST00000378961 MAGEA8P43361 318 aa13.25□□□□□ -0.29
CHGB-201ENST00000378961 ZNF200P98182 395 aaPredicted RBP13.25□□□□□ -0.29
CHGB-201ENST00000378961 BST1Q10588 318 aa13.25□□□□□ -0.29
CHGB-201ENST00000378961 BMPR2Q13873 1038 aa13.25□□□□□ -0.29
CHGB-201ENST00000378961 KRT72Q14CN4 511 aa13.25□□□□□ -0.29
CHGB-201ENST00000378961 TLR1Q15399 786 aa13.25□□□□□ -0.29
CHGB-201ENST00000378961 NFIL3Q16649 462 aa13.25□□□□□ -0.29
CHGB-201ENST00000378961 UGCGQ16739 394 aa13.25□□□□□ -0.29
CHGB-201ENST00000378961 SH3D19Q5HYK7 790 aa13.25□□□□□ -0.29
CHGB-201ENST00000378961 SPOPLQ6IQ16 392 aa13.25□□□□□ -0.29
CHGB-201ENST00000378961 RELL1Q8IUW5 271 aa13.25□□□□□ -0.29
CHGB-201ENST00000378961 C4orf19Q8IY42 314 aa13.25□□□□□ -0.29
CHGB-201ENST00000378961 RIN3Q8TB24 985 aa13.25□□□□□ -0.29
CHGB-201ENST00000378961 ZNF398Q8TD17 642 aa13.25□□□□□ -0.29
CHGB-201ENST00000378961 FAM172AQ8WUF8 416 aa13.25□□□□□ -0.29
CHGB-201ENST00000378961 SLC16A4O15374 487 aa13.24□□□□□ -0.29
CHGB-201ENST00000378961 LYPLA2O95372 231 aa13.24□□□□□ -0.29
CHGB-201ENST00000378961 CCNE2O96020 404 aa13.24□□□□□ -0.29
CHGB-201ENST00000378961 KRT1P04264 644 aa13.24□□□□□ -0.29
CHGB-201ENST00000378961 SLC1A1P43005 524 aa13.24□□□□□ -0.29
CHGB-201ENST00000378961 ADARP55265 1226 aaKnown RBP13.24□□□□□ -0.29
CHGB-201ENST00000378961 TMPRSS15P98073 1019 aa13.24□□□□□ -0.29
CHGB-201ENST00000378961 NFX1Q12986 1120 aaKnown RBP13.24□□□□□ -0.29
CHGB-201ENST00000378961 CCNIQ14094 377 aa13.24□□□□□ -0.29
CHGB-201ENST00000378961 TRMT5Q32P41 509 aaKnown RBP13.24□□□□□ -0.29
CHGB-201ENST00000378961 FAM102BQ5T8I3 360 aa13.24□□□□□ -0.29
CHGB-201ENST00000378961 C6orf163Q5TEZ5 329 aa13.24□□□□□ -0.29
CHGB-201ENST00000378961 RSPH3Q86UC2 560 aa13.24□□□□□ -0.29
CHGB-201ENST00000378961 MAP7D3Q8IWC1 876 aa13.24□□□□□ -0.29
CHGB-201ENST00000378961 BBOF1Q8ND07 529 aa13.24□□□□□ -0.29
CHGB-201ENST00000378961 STKLD1Q8NE28 680 aa13.24□□□□□ -0.29
CHGB-201ENST00000378961 ZFP28Q8NHY6 868 aa13.24□□□□□ -0.29
CHGB-201ENST00000378961 ERLEC1Q96DZ1 483 aa13.24□□□□□ -0.29
CHGB-201ENST00000378961 TMEM206Q9H813 350 aa13.24□□□□□ -0.29
CHGB-201ENST00000378961 ACAD9Q9H845 621 aa13.24□□□□□ -0.29
CHGB-201ENST00000378961 SENP1Q9P0U3 644 aa13.24□□□□□ -0.29
CHGB-201ENST00000378961 ADAMTS5Q9UNA0 930 aa13.24□□□□□ -0.29
CHGB-201ENST00000378961 AFG3L2Q9Y4W6 797 aa13.24□□□□□ -0.29
CHGB-201ENST00000378961 LOC100653049A0A140TA62 436 aa13.24□□□□□ -0.29
CHGB-201ENST00000378961 MAGEC1O60732 1142 aa13.24□□□□□ -0.29
CHGB-201ENST00000378961 LYPLA1O75608 230 aaPredicted RBP13.24□□□□□ -0.29
CHGB-201ENST00000378961 KRT34O76011 436 aa13.24□□□□□ -0.29
CHGB-201ENST00000378961 TMCC1O94876 653 aa13.24□□□□□ -0.29
CHGB-201ENST00000378961 TFAP2AP05549 437 aa13.24□□□□□ -0.29
CHGB-201ENST00000378961 RAG1P15918 1043 aa13.24□□□□□ -0.29
CHGB-201ENST00000378961 ETV4P43268 484 aa13.24□□□□□ -0.29
CHGB-201ENST00000378961 MFAP3P55082 362 aa13.24□□□□□ -0.29
CHGB-201ENST00000378961 SP4Q02446 784 aa13.24□□□□□ -0.29
CHGB-201ENST00000378961 FOLH1Q04609 750 aa13.24□□□□□ -0.29
CHGB-201ENST00000378961 TBL3Q12788 808 aaKnown RBP13.24□□□□□ -0.29
CHGB-201ENST00000378961 PTK7Q13308 1070 aa13.24□□□□□ -0.29
CHGB-201ENST00000378961 MYLK3Q32MK0 819 aa13.24□□□□□ -0.29
CHGB-201ENST00000378961 SPDYAQ5MJ70 313 aa13.24□□□□□ -0.29
CHGB-201ENST00000378961 PLA2G4FQ68DD2 849 aa13.24□□□□□ -0.29
CHGB-201ENST00000378961 SCARA3Q6AZY7 606 aa13.24□□□□□ -0.29
CHGB-201ENST00000378961 UGT2A3Q6UWM9 527 aa13.24□□□□□ -0.29
CHGB-201ENST00000378961 ARHGAP24Q8N264 748 aa13.24□□□□□ -0.29
CHGB-201ENST00000378961 LRRN4Q8WUT4 740 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms