RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 TRIM21P19474 475 aaKnown RBP18■□□□□ 0.47
RER1-202ENST00000378512 YWHAQP27348 245 aa18■□□□□ 0.47
RER1-202ENST00000378512 MAGEA9P43362 315 aa18■□□□□ 0.47
RER1-202ENST00000378512 PDE6CP51160 858 aa18■□□□□ 0.47
RER1-202ENST00000378512 SLC5A3P53794 718 aa18■□□□□ 0.47
RER1-202ENST00000378512 KCNH2Q12809 1159 aa18■□□□□ 0.47
RER1-202ENST00000378512 USP4Q13107 963 aa18■□□□□ 0.47
RER1-202ENST00000378512 ZNF77Q15935 545 aa18■□□□□ 0.47
RER1-202ENST00000378512 YAF2Q8IY57 180 aa18■□□□□ 0.47
RER1-202ENST00000378512 KIAA1958Q8N8K9 716 aa18■□□□□ 0.47
RER1-202ENST00000378512 ZBTB44Q8NCP5 570 aa18■□□□□ 0.47
RER1-202ENST00000378512 SCAMP5Q8TAC9 235 aa18■□□□□ 0.47
RER1-202ENST00000378512 GPT2Q8TD30 523 aa18■□□□□ 0.47
RER1-202ENST00000378512 TMEM176AQ96HP8 235 aa18■□□□□ 0.47
RER1-202ENST00000378512 SLITRK1Q96PX8 696 aa18■□□□□ 0.47
RER1-202ENST00000378512 CYP2S1Q96SQ9 504 aa18■□□□□ 0.47
RER1-202ENST00000378512 ARHGAP26Q9UNA1 814 aa18■□□□□ 0.47
RER1-202ENST00000378512 FAM200BP0CF97 657 aa17.99■□□□□ 0.47
RER1-202ENST00000378512 TBXAS1P24557 533 aaPredicted RBP17.99■□□□□ 0.47
RER1-202ENST00000378512 ID4P47928 161 aa17.99■□□□□ 0.47
RER1-202ENST00000378512 SLC7A9P82251 487 aa17.99■□□□□ 0.47
RER1-202ENST00000378512 ZXDBP98169 803 aa17.99■□□□□ 0.47
RER1-202ENST00000378512 PPP1R26Q5T8A7 1209 aaPredicted RBP17.99■□□□□ 0.47
RER1-202ENST00000378512 ARHGAP17Q68EM7 881 aa17.99■□□□□ 0.47
RER1-202ENST00000378512 C1orf228Q6PIY5 440 aa17.99■□□□□ 0.47
RER1-202ENST00000378512 ARL14EPQ8N8R7 260 aaPredicted RBP17.99■□□□□ 0.47
RER1-202ENST00000378512 PDZD8Q8NEN9 1154 aa17.99■□□□□ 0.47
RER1-202ENST00000378512 CSGALNACT1Q8TDX6 532 aa17.99■□□□□ 0.47
RER1-202ENST00000378512 RNF38Q9H0F5 515 aa17.99■□□□□ 0.47
RER1-202ENST00000378512 C2orf42Q9NWW7 574 aa17.99■□□□□ 0.47
RER1-202ENST00000378512 CCDC192P0DO97 292 aa17.98■□□□□ 0.47
RER1-202ENST00000378512 HDCP19113 662 aa17.98■□□□□ 0.47
RER1-202ENST00000378512 KPNA1P52294 538 aaPredicted RBP17.98■□□□□ 0.47
RER1-202ENST00000378512 MAP3K7CLP57077 242 aa17.98■□□□□ 0.47
RER1-202ENST00000378512 SATB1Q01826 763 aa17.98■□□□□ 0.47
RER1-202ENST00000378512 DMWDQ09019 674 aa17.98■□□□□ 0.47
RER1-202ENST00000378512 DPCR1Q3MIW9 517 aa17.98■□□□□ 0.47
RER1-202ENST00000378512 Q6ZS52 159 aa17.98■□□□□ 0.47
RER1-202ENST00000378512 RUBCNQ92622 972 aa17.98■□□□□ 0.47
RER1-202ENST00000378512 RMDN1Q96DB5 314 aa17.98■□□□□ 0.47
RER1-202ENST00000378512 DUSP16Q9BY84 665 aa17.98■□□□□ 0.47
RER1-202ENST00000378512 DNAI2Q9GZS0 605 aa17.98■□□□□ 0.47
RER1-202ENST00000378512 C8orf33Q9H7E9 229 aaPredicted RBP17.98■□□□□ 0.47
RER1-202ENST00000378512 TRPC7Q9HCX4 862 aa17.98■□□□□ 0.47
RER1-202ENST00000378512 HPS4Q9NQG7 708 aa17.98■□□□□ 0.47
RER1-202ENST00000378512 THG1LQ9NWX6 298 aaKnown RBP17.98■□□□□ 0.47
RER1-202ENST00000378512 ZSCAN32Q9NX65 697 aa17.98■□□□□ 0.47
RER1-202ENST00000378512 PCDHGA2Q9Y5H1 932 aa17.98■□□□□ 0.47
RER1-202ENST00000378512 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.98■□□□□ 0.47
RER1-202ENST00000378512 SPECC1L-ADORA2AF8WAN1 911 aa17.98■□□□□ 0.47
RER1-202ENST00000378512 LILRB5O75023 590 aa17.98■□□□□ 0.47
RER1-202ENST00000378512 AFPP02771 609 aaKnown RBP17.98■□□□□ 0.47
RER1-202ENST00000378512 CKMP06732 381 aa17.98■□□□□ 0.47
RER1-202ENST00000378512 ACO1P21399 889 aaKnown RBP17.98■□□□□ 0.47
RER1-202ENST00000378512 ERCC5P28715 1186 aaPredicted RBP17.98■□□□□ 0.47
RER1-202ENST00000378512 ADORA2BP29275 332 aa17.98■□□□□ 0.47
RER1-202ENST00000378512 TUBP50607 506 aa17.98■□□□□ 0.47
RER1-202ENST00000378512 ZNF394Q53GI3 561 aa17.98■□□□□ 0.47
RER1-202ENST00000378512 CT47A1Q5JQC4 288 aaPredicted RBP17.98■□□□□ 0.47
RER1-202ENST00000378512 EHBP1Q8NDI1 1231 aa17.98■□□□□ 0.47
RER1-202ENST00000378512 ATRIPQ8WXE1 791 aa17.98■□□□□ 0.47
RER1-202ENST00000378512 FBXO32Q969P5 355 aa17.98■□□□□ 0.47
RER1-202ENST00000378512 UBXN6Q9BZV1 441 aa17.98■□□□□ 0.47
RER1-202ENST00000378512 FBXO44Q9H4M3 255 aa17.98■□□□□ 0.47
RER1-202ENST00000378512 GKN1Q9NS71 199 aa17.98■□□□□ 0.47
RER1-202ENST00000378512 CTHP32929 405 aa17.97■□□□□ 0.47
RER1-202ENST00000378512 YWHAEP62258 255 aaKnown RBP17.97■□□□□ 0.47
RER1-202ENST00000378512 GCNT1Q02742 428 aa17.97■□□□□ 0.47
RER1-202ENST00000378512 CETN1Q12798 172 aa17.97■□□□□ 0.47
RER1-202ENST00000378512 MTF1Q14872 753 aa17.97■□□□□ 0.47
RER1-202ENST00000378512 GPRIN1Q7Z2K8 1008 aa17.97■□□□□ 0.47
RER1-202ENST00000378512 RALGPS2Q86X27 583 aaPredicted RBP17.97■□□□□ 0.47
RER1-202ENST00000378512 CHFRQ96EP1 664 aa17.97■□□□□ 0.47
RER1-202ENST00000378512 CNOT6LQ96LI5 555 aaKnown RBP17.97■□□□□ 0.47
RER1-202ENST00000378512 HEXIM2Q96MH2 286 aaKnown RBP17.97■□□□□ 0.47
RER1-202ENST00000378512 NT5C1BQ96P26 610 aa17.97■□□□□ 0.47
RER1-202ENST00000378512 SMG5Q9UPR3 1016 aaKnown RBP17.97■□□□□ 0.47
RER1-202ENST00000378512 SCML2Q9UQR0 700 aa17.97■□□□□ 0.47
RER1-202ENST00000378512 USP3Q9Y6I4 520 aa17.97■□□□□ 0.47
RER1-202ENST00000378512 OTOL1A6NHN0 477 aaPredicted RBP17.96■□□□□ 0.47
RER1-202ENST00000378512 KIF11P52732 1056 aa17.96■□□□□ 0.47
RER1-202ENST00000378512 PON2Q15165 354 aa17.96■□□□□ 0.47
RER1-202ENST00000378512 LPAL2Q16609 132 aa17.96■□□□□ 0.47
RER1-202ENST00000378512 TRIM68Q6AZZ1 485 aa17.96■□□□□ 0.47
RER1-202ENST00000378512 MAMSTRQ6ZN01 415 aa17.96■□□□□ 0.47
RER1-202ENST00000378512 SH3RF2Q8TEC5 729 aa17.96■□□□□ 0.47
RER1-202ENST00000378512 OSCP1Q8WVF1 389 aa17.96■□□□□ 0.47
RER1-202ENST00000378512 ZFRQ96KR1 1074 aaKnown RBP17.96■□□□□ 0.47
RER1-202ENST00000378512 KIAA1257Q9ULG3 409 aa17.96■□□□□ 0.47
RER1-202ENST00000378512 CNTN6Q9UQ52 1028 aa17.96■□□□□ 0.47
RER1-202ENST00000378512 PGFP49763 221 aa17.95■□□□□ 0.46
RER1-202ENST00000378512 LRMPQ12912 555 aa17.95■□□□□ 0.46
RER1-202ENST00000378512 RUNX3Q13761 415 aa17.95■□□□□ 0.46
RER1-202ENST00000378512 PDGFRLQ15198 375 aa17.95■□□□□ 0.46
RER1-202ENST00000378512 ITPRIPL2Q3MIP1 535 aa17.95■□□□□ 0.46
RER1-202ENST00000378512 RAB41Q5JT25 222 aa17.95■□□□□ 0.46
RER1-202ENST00000378512 ZNF276Q8N554 614 aa17.95■□□□□ 0.46
RER1-202ENST00000378512 ANKRD52Q8NB46 1076 aa17.95■□□□□ 0.46
RER1-202ENST00000378512 JAKMIP2Q96AA8 810 aa17.95■□□□□ 0.46
RER1-202ENST00000378512 EPC1Q9H2F5 836 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms