RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 TPH1P17752 444 aa16.86■□□□□ 0.29
RGP1-201ENST00000378078 FAM187AA6NFU0 413 aa16.86■□□□□ 0.29
RGP1-201ENST00000378078 GRK4P32298 578 aa16.86■□□□□ 0.29
RGP1-201ENST00000378078 WDR36Q8NI36 951 aaKnown RBP16.86■□□□□ 0.29
RGP1-201ENST00000378078 ROBO2Q9HCK4 1378 aa16.86■□□□□ 0.29
RGP1-201ENST00000378078 ADGRL3Q9HAR2 1447 aa16.86■□□□□ 0.29
RGP1-201ENST00000378078 C16orf96A6NNT2 1141 aa16.86■□□□□ 0.29
RGP1-201ENST00000378078 LBPP18428 481 aa16.86■□□□□ 0.29
RGP1-201ENST00000378078 TTC39CQ8N584 583 aa16.86■□□□□ 0.29
RGP1-201ENST00000378078 ELL3Q9HB65 397 aaPredicted RBP16.86■□□□□ 0.29
RGP1-201ENST00000378078 DGAT1O75907 488 aa16.85■□□□□ 0.29
RGP1-201ENST00000378078 SGPL1O95470 568 aa16.85■□□□□ 0.29
RGP1-201ENST00000378078 RAG1P15918 1043 aa16.85■□□□□ 0.29
RGP1-201ENST00000378078 CCDC92Q53HC0 331 aaPredicted RBP16.85■□□□□ 0.29
RGP1-201ENST00000378078 HERC6Q8IVU3 1022 aa16.85■□□□□ 0.29
RGP1-201ENST00000378078 USP13Q92995 863 aaPredicted RBP16.85■□□□□ 0.29
RGP1-201ENST00000378078 C12orf60Q5U649 245 aa16.85■□□□□ 0.29
RGP1-201ENST00000378078 CBWD2Q8IUF1 395 aa16.85■□□□□ 0.29
RGP1-201ENST00000378078 RSPH1Q8WYR4 309 aa16.85■□□□□ 0.29
RGP1-201ENST00000378078 CLPBQ9H078 707 aa16.85■□□□□ 0.29
RGP1-201ENST00000378078 RHBDL2Q9NX52 303 aa16.85■□□□□ 0.29
RGP1-201ENST00000378078 PLEKHG1Q9ULL1 1385 aa16.85■□□□□ 0.29
RGP1-201ENST00000378078 MAGEA4P43358 317 aa16.85■□□□□ 0.29
RGP1-201ENST00000378078 SFSWAPQ12872 951 aaKnown RBP16.85■□□□□ 0.29
RGP1-201ENST00000378078 TTC33Q6PID6 262 aaPredicted RBP16.85■□□□□ 0.29
RGP1-201ENST00000378078 ATG4AQ8WYN0 398 aa16.85■□□□□ 0.29
RGP1-201ENST00000378078 DPF2Q92785 391 aa16.85■□□□□ 0.29
RGP1-201ENST00000378078 FBXO28Q9NVF7 368 aa16.85■□□□□ 0.29
RGP1-201ENST00000378078 ALKBH4Q9NXW9 302 aa16.85■□□□□ 0.29
RGP1-201ENST00000378078 PRKAG3Q9UGI9 489 aa16.85■□□□□ 0.29
RGP1-201ENST00000378078 GPSM3Q9Y4H4 160 aa16.85■□□□□ 0.29
RGP1-201ENST00000378078 BIVM-ERCC5R4GMW8 1640 aa16.85■□□□□ 0.29
RGP1-201ENST00000378078 ACAT1P24752 427 aaKnown RBP16.85■□□□□ 0.29
RGP1-201ENST00000378078 ACADSBP45954 432 aa16.85■□□□□ 0.29
RGP1-201ENST00000378078 PRKAA1Q13131 559 aa16.85■□□□□ 0.29
RGP1-201ENST00000378078 DHX34Q14147 1143 aaKnown RBP16.85■□□□□ 0.29
RGP1-201ENST00000378078 STAT4Q14765 748 aa16.85■□□□□ 0.29
RGP1-201ENST00000378078 FIG4Q92562 907 aa16.85■□□□□ 0.29
RGP1-201ENST00000378078 FAM111AQ96PZ2 611 aa16.85■□□□□ 0.29
RGP1-201ENST00000378078 SNTG2Q9NY99 539 aa16.85■□□□□ 0.29
RGP1-201ENST00000378078 TMCC3Q9ULS5 477 aa16.85■□□□□ 0.29
RGP1-201ENST00000378078 SLC2A4P14672 509 aa16.85■□□□□ 0.29
RGP1-201ENST00000378078 PSMA3P25788 255 aa16.85■□□□□ 0.29
RGP1-201ENST00000378078 EFHC1Q5JVL4 640 aa16.85■□□□□ 0.29
RGP1-201ENST00000378078 ERP27Q96DN0 273 aa16.85■□□□□ 0.29
RGP1-201ENST00000378078 MYO5CQ9NQX4 1742 aa16.85■□□□□ 0.29
RGP1-201ENST00000378078 PFASO15067 1338 aa16.84■□□□□ 0.29
RGP1-201ENST00000378078 OR6A2O95222 327 aa16.84■□□□□ 0.29
RGP1-201ENST00000378078 CSHL1Q14406 222 aa16.84■□□□□ 0.29
RGP1-201ENST00000378078 UNC45BQ8IWX7 931 aa16.84■□□□□ 0.29
RGP1-201ENST00000378078 ZDHHC6Q9H6R6 413 aa16.84■□□□□ 0.29
RGP1-201ENST00000378078 EFCAB6Q5THR3 1501 aa16.84■□□□□ 0.29
RGP1-201ENST00000378078 TRDMT1O14717 391 aaKnown RBP16.84■□□□□ 0.29
RGP1-201ENST00000378078 BRSK2Q8IWQ3 736 aa16.84■□□□□ 0.29
RGP1-201ENST00000378078 GRIN3AQ8TCU5 1115 aa16.84■□□□□ 0.29
RGP1-201ENST00000378078 RIN2Q8WYP3 895 aaPredicted RBP16.84■□□□□ 0.29
RGP1-201ENST00000378078 OLFM3Q96PB7 478 aa16.84■□□□□ 0.29
RGP1-201ENST00000378078 OSMRQ99650 979 aa16.84■□□□□ 0.29
RGP1-201ENST00000378078 NUDT5Q9UKK9 219 aa16.84■□□□□ 0.29
RGP1-201ENST00000378078 PTCH1Q13635 1447 aa16.84■□□□□ 0.29
RGP1-201ENST00000378078 MYMKA6NI61 221 aa16.84■□□□□ 0.29
RGP1-201ENST00000378078 TP73O15350 636 aa16.84■□□□□ 0.29
RGP1-201ENST00000378078 IGKV5-2P06315 115 aa16.84■□□□□ 0.29
RGP1-201ENST00000378078 GTF2A2P52657 109 aa16.84■□□□□ 0.29
RGP1-201ENST00000378078 FAM83EQ2M2I3 478 aa16.84■□□□□ 0.29
RGP1-201ENST00000378078 KIAA1324Q6UXG2 1013 aaKnown RBP16.84■□□□□ 0.29
RGP1-201ENST00000378078 DNAJB3Q8WWF6 145 aa16.84■□□□□ 0.29
RGP1-201ENST00000378078 MTMR4Q9NYA4 1195 aa16.84■□□□□ 0.29
RGP1-201ENST00000378078 HPS5Q9UPZ3 1129 aa16.84■□□□□ 0.29
RGP1-201ENST00000378078 IFNA16P05015 189 aa16.84■□□□□ 0.29
RGP1-201ENST00000378078 EIF2B5Q13144 721 aaKnown RBP16.84■□□□□ 0.29
RGP1-201ENST00000378078 NFYCQ13952 458 aa16.84■□□□□ 0.29
RGP1-201ENST00000378078 NEK10Q6ZWH5 1172 aa16.84■□□□□ 0.29
RGP1-201ENST00000378078 LRRC8DQ7L1W4 858 aa16.84■□□□□ 0.29
RGP1-201ENST00000378078 SAPCD2Q86UD0 394 aa16.84■□□□□ 0.29
RGP1-201ENST00000378078 TTLL9Q3SXZ7 439 aa16.84■□□□□ 0.29
RGP1-201ENST00000378078 STK33Q9BYT3 514 aa16.84■□□□□ 0.29
RGP1-201ENST00000378078 PVALEFA0A1B0GWK0 134 aa16.84■□□□□ 0.29
RGP1-201ENST00000378078 RPRD1BQ9NQG5 326 aaKnown RBP16.84■□□□□ 0.29
RGP1-201ENST00000378078 KLC4Q9NSK0 619 aa16.84■□□□□ 0.29
RGP1-201ENST00000378078 GRIK3Q13003 919 aa16.83■□□□□ 0.29
RGP1-201ENST00000378078 CBWD3Q5JTY5 395 aa16.83■□□□□ 0.29
RGP1-201ENST00000378078 CBWD5Q5RIA9 395 aa16.83■□□□□ 0.29
RGP1-201ENST00000378078 KIFC1Q9BW19 673 aa16.83■□□□□ 0.29
RGP1-201ENST00000378078 USP20Q9Y2K6 914 aa16.83■□□□□ 0.29
RGP1-201ENST00000378078 WDR19Q8NEZ3 1342 aa16.83■□□□□ 0.29
RGP1-201ENST00000378078 PRKAG1P54619 331 aa16.83■□□□□ 0.29
RGP1-201ENST00000378078 MXRA8Q9BRK3 442 aa16.83■□□□□ 0.29
RGP1-201ENST00000378078 PHACTR1Q9C0D0 580 aa16.83■□□□□ 0.29
RGP1-201ENST00000378078 RANBP17Q9H2T7 1088 aaKnown RBP16.83■□□□□ 0.29
RGP1-201ENST00000378078 SETD4Q9NVD3 440 aa16.83■□□□□ 0.29
RGP1-201ENST00000378078 GOLGA8TH3BQL2 631 aa16.83■□□□□ 0.28
RGP1-201ENST00000378078 AP3B1O00203 1094 aa16.83■□□□□ 0.28
RGP1-201ENST00000378078 CATSPER1Q8NEC5 780 aa16.83■□□□□ 0.28
RGP1-201ENST00000378078 ZNF473Q8WTR7 871 aaKnown RBP16.83■□□□□ 0.28
RGP1-201ENST00000378078 RAD21L1Q9H4I0 556 aa16.83■□□□□ 0.28
RGP1-201ENST00000378078 GBA2Q9HCG7 927 aaPredicted RBP16.83■□□□□ 0.28
RGP1-201ENST00000378078 KCNH7Q9NS40 1196 aa16.83■□□□□ 0.28
RGP1-201ENST00000378078 BAIAP3O94812 1187 aa16.83■□□□□ 0.28
RGP1-201ENST00000378078 ITGA3P26006 1051 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms