RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 LSM14BQ9BX40 385 aaKnown RBP20.38■□□□□ 0.85
CBWD3-204ENST00000377349 ZNF518BQ9C0D4 1074 aa20.38■□□□□ 0.85
CBWD3-204ENST00000377349 XYLT2Q9H1B5 865 aa20.38■□□□□ 0.85
CBWD3-204ENST00000377349 CGNQ9P2M7 1197 aaKnown RBP20.38■□□□□ 0.85
CBWD3-204ENST00000377349 USP25Q9UHP3 1055 aa20.38■□□□□ 0.85
CBWD3-204ENST00000377349 CPQQ9Y646 472 aa20.38■□□□□ 0.85
CBWD3-204ENST00000377349 SCAMP3O14828 347 aaKnown RBP20.37■□□□□ 0.85
CBWD3-204ENST00000377349 FAM163BP0C2L3 166 aa20.37■□□□□ 0.85
CBWD3-204ENST00000377349 PTPN1P18031 435 aaKnown RBP20.37■□□□□ 0.85
CBWD3-204ENST00000377349 ANXA13P27216 316 aa20.37■□□□□ 0.85
CBWD3-204ENST00000377349 DGKEP52429 567 aa20.37■□□□□ 0.85
CBWD3-204ENST00000377349 SEC13P55735 322 aa20.37■□□□□ 0.85
CBWD3-204ENST00000377349 MYL6P60660 151 aa20.37■□□□□ 0.85
CBWD3-204ENST00000377349 TAF10Q12962 218 aa20.37■□□□□ 0.85
CBWD3-204ENST00000377349 C2orf27AQ580R0 203 aa20.37■□□□□ 0.85
CBWD3-204ENST00000377349 CEP135Q66GS9 1140 aa20.37■□□□□ 0.85
CBWD3-204ENST00000377349 SCARA5Q6ZMJ2 495 aa20.37■□□□□ 0.85
CBWD3-204ENST00000377349 TSTD1Q8NFU3 115 aa20.37■□□□□ 0.85
CBWD3-204ENST00000377349 ELMO3Q96BJ8 720 aa20.37■□□□□ 0.85
CBWD3-204ENST00000377349 TPSD1Q9BZJ3 242 aa20.37■□□□□ 0.85
CBWD3-204ENST00000377349 SCAND2PQ9GZW5 306 aaPredicted RBP20.37■□□□□ 0.85
CBWD3-204ENST00000377349 MMP17Q9ULZ9 603 aa20.37■□□□□ 0.85
CBWD3-204ENST00000377349 MAPK8IP1Q9UQF2 711 aa20.37■□□□□ 0.85
CBWD3-204ENST00000377349 INVSQ9Y283 1065 aa20.37■□□□□ 0.85
CBWD3-204ENST00000377349 CLDN5O00501 218 aa20.36■□□□□ 0.85
CBWD3-204ENST00000377349 STAU1O95793 577 aaKnown RBP20.36■□□□□ 0.85
CBWD3-204ENST00000377349 BCKDHBP21953 392 aa20.36■□□□□ 0.85
CBWD3-204ENST00000377349 PPP3CCP48454 512 aa20.36■□□□□ 0.85
CBWD3-204ENST00000377349 CREB5Q02930 508 aa20.36■□□□□ 0.85
CBWD3-204ENST00000377349 BECN1Q14457 450 aa20.36■□□□□ 0.85
CBWD3-204ENST00000377349 DHCR24Q15392 516 aa20.36■□□□□ 0.85
CBWD3-204ENST00000377349 ELF2Q15723 593 aa20.36■□□□□ 0.85
CBWD3-204ENST00000377349 ST3GAL2Q16842 350 aa20.36■□□□□ 0.85
CBWD3-204ENST00000377349 PMS2CLQ68D20 193 aa20.36■□□□□ 0.85
CBWD3-204ENST00000377349 C12orf40Q86WS4 652 aa20.36■□□□□ 0.85
CBWD3-204ENST00000377349 MDGA1Q8NFP4 955 aa20.36■□□□□ 0.85
CBWD3-204ENST00000377349 PLEKHO2Q8TD55 490 aa20.36■□□□□ 0.85
CBWD3-204ENST00000377349 B3GNT5Q9BYG0 378 aa20.36■□□□□ 0.85
CBWD3-204ENST00000377349 SMPD4Q9NXE4 827 aa20.36■□□□□ 0.85
CBWD3-204ENST00000377349 HPSEQ9Y251 543 aa20.36■□□□□ 0.85
CBWD3-204ENST00000377349 AKAP13Q12802 2813 aa20.36■□□□□ 0.85
CBWD3-204ENST00000377349 RHOBTB1O94844 696 aa20.36■□□□□ 0.85
CBWD3-204ENST00000377349 NR3C1P04150 777 aa20.36■□□□□ 0.85
CBWD3-204ENST00000377349 SLC6A11P48066 632 aa20.36■□□□□ 0.85
CBWD3-204ENST00000377349 SHC2P98077 582 aa20.36■□□□□ 0.85
CBWD3-204ENST00000377349 IFRD2Q12894 506 aaPredicted RBP20.36■□□□□ 0.85
CBWD3-204ENST00000377349 ZNF699Q32M78 642 aa20.36■□□□□ 0.85
CBWD3-204ENST00000377349 RNF43Q68DV7 783 aa20.36■□□□□ 0.85
CBWD3-204ENST00000377349 RHBDF2Q6PJF5 856 aa20.36■□□□□ 0.85
CBWD3-204ENST00000377349 TMEM92Q6UXU6 159 aa20.36■□□□□ 0.85
CBWD3-204ENST00000377349 C12orf56Q8IXR9 622 aa20.36■□□□□ 0.85
CBWD3-204ENST00000377349 B3GALNT2Q8NCR0 500 aa20.36■□□□□ 0.85
CBWD3-204ENST00000377349 ZFRQ96KR1 1074 aaKnown RBP20.36■□□□□ 0.85
CBWD3-204ENST00000377349 CNOT6LQ96LI5 555 aaKnown RBP20.36■□□□□ 0.85
CBWD3-204ENST00000377349 ELOVL4Q9GZR5 314 aa20.36■□□□□ 0.85
CBWD3-204ENST00000377349 GOLPH3LQ9H4A5 285 aa20.36■□□□□ 0.85
CBWD3-204ENST00000377349 EHD2Q9NZN4 543 aa20.36■□□□□ 0.85
CBWD3-204ENST00000377349 SPEGQ15772 3267 aa20.35■□□□□ 0.85
CBWD3-204ENST00000377349 LNP1A1A4G5 178 aa20.35■□□□□ 0.85
CBWD3-204ENST00000377349 LRRIQ3A6PVS8 624 aaPredicted RBP20.35■□□□□ 0.85
CBWD3-204ENST00000377349 KCNK5O95279 499 aa20.35■□□□□ 0.85
CBWD3-204ENST00000377349 CAVIN2O95810 425 aa20.35■□□□□ 0.85
CBWD3-204ENST00000377349 CRY1Q16526 586 aa20.35■□□□□ 0.85
CBWD3-204ENST00000377349 ANO7Q6IWH7 933 aa20.35■□□□□ 0.85
CBWD3-204ENST00000377349 PAQR9Q6ZVX9 377 aa20.35■□□□□ 0.85
CBWD3-204ENST00000377349 PHTF2Q8N3S3 785 aa20.35■□□□□ 0.85
CBWD3-204ENST00000377349 CCDC33Q8N5R6 958 aa20.35■□□□□ 0.85
CBWD3-204ENST00000377349 CCDC26Q8TAB7 109 aa20.35■□□□□ 0.85
CBWD3-204ENST00000377349 OLIG1Q8TAK6 271 aa20.35■□□□□ 0.85
CBWD3-204ENST00000377349 SYAP1Q96A49 352 aaPredicted RBP20.35■□□□□ 0.85
CBWD3-204ENST00000377349 EDEM2Q9BV94 578 aa20.35■□□□□ 0.85
CBWD3-204ENST00000377349 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.35■□□□□ 0.85
CBWD3-204ENST00000377349 CFAP97Q9P2B7 532 aa20.35■□□□□ 0.85
CBWD3-204ENST00000377349 ANGPTL2Q9UKU9 493 aa20.35■□□□□ 0.85
CBWD3-204ENST00000377349 A8MXQ7 604 aa20.34■□□□□ 0.85
CBWD3-204ENST00000377349 CALUO43852 315 aaPredicted RBP20.34■□□□□ 0.85
CBWD3-204ENST00000377349 GBP1P32455 592 aa20.34■□□□□ 0.85
CBWD3-204ENST00000377349 TDRD10Q5VZ19 366 aaKnown RBP20.34■□□□□ 0.85
CBWD3-204ENST00000377349 SMYD3Q9H7B4 428 aa20.34■□□□□ 0.85
CBWD3-204ENST00000377349 VRTNQ9H8Y1 702 aa20.34■□□□□ 0.85
CBWD3-204ENST00000377349 FRMD4BQ9Y2L6 1034 aa20.34■□□□□ 0.85
CBWD3-204ENST00000377349 FAM208BQ5VWN6 2430 aa20.34■□□□□ 0.85
CBWD3-204ENST00000377349 A0A0A0MRY4 1105 aa20.33■□□□□ 0.84
CBWD3-204ENST00000377349 GOLGA6L4A6NEF3 574 aa20.33■□□□□ 0.84
CBWD3-204ENST00000377349 TNFRSF10BO14763 440 aa20.33■□□□□ 0.84
CBWD3-204ENST00000377349 ABL1P00519 1130 aa20.33■□□□□ 0.84
CBWD3-204ENST00000377349 MYL1P05976 194 aa20.33■□□□□ 0.84
CBWD3-204ENST00000377349 EIF2DP41214 584 aaKnown RBP20.33■□□□□ 0.84
CBWD3-204ENST00000377349 KIR2DL1P43626 348 aaPredicted RBP20.33■□□□□ 0.84
CBWD3-204ENST00000377349 DLG4P78352 724 aa20.33■□□□□ 0.84
CBWD3-204ENST00000377349 MRPS21P82921 87 aaKnown RBP20.33■□□□□ 0.84
CBWD3-204ENST00000377349 NCOA4Q13772 614 aa20.33■□□□□ 0.84
CBWD3-204ENST00000377349 USP39Q53GS9 565 aaKnown RBP20.33■□□□□ 0.84
CBWD3-204ENST00000377349 KRBA2Q6ZNG9 492 aa20.33■□□□□ 0.84
CBWD3-204ENST00000377349 NUP93Q8N1F7 819 aa20.33■□□□□ 0.84
CBWD3-204ENST00000377349 ALLCQ8N6M5 410 aa20.33■□□□□ 0.84
CBWD3-204ENST00000377349 IL17RCQ8NAC3 791 aa20.33■□□□□ 0.84
CBWD3-204ENST00000377349 SLITRK1Q96PX8 696 aa20.33■□□□□ 0.84
CBWD3-204ENST00000377349 KCNK16Q96T55 309 aa20.33■□□□□ 0.84
CBWD3-204ENST00000377349 MED10Q9BTT4 135 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms