RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 ALDH16A1Q8IZ83 802 aa10.23□□□□□ -0.77
C9orf85-202ENST00000377027 CELF5Q8N6W0 485 aaKnown RBP10.23□□□□□ -0.77
C9orf85-202ENST00000377027 LRRC52Q8N7C0 313 aa10.23□□□□□ -0.77
C9orf85-202ENST00000377027 ZNF560Q96MR9 790 aa10.23□□□□□ -0.77
C9orf85-202ENST00000377027 CYP2S1Q96SQ9 504 aa10.23□□□□□ -0.77
C9orf85-202ENST00000377027 ZCCHC2Q9C0B9 1178 aaKnown RBP10.23□□□□□ -0.77
C9orf85-202ENST00000377027 EBF3Q9H4W6 596 aa10.23□□□□□ -0.77
C9orf85-202ENST00000377027 CRTAC1Q9NQ79 661 aa10.23□□□□□ -0.77
C9orf85-202ENST00000377027 GKN1Q9NS71 199 aa10.23□□□□□ -0.77
C9orf85-202ENST00000377027 NDFIP2Q9NV92 336 aa10.23□□□□□ -0.77
C9orf85-202ENST00000377027 TMEM30AQ9NV96 361 aa10.23□□□□□ -0.77
C9orf85-202ENST00000377027 GDAP2Q9NXN4 497 aa10.23□□□□□ -0.77
C9orf85-202ENST00000377027 DDX43Q9NXZ2 648 aaKnown RBP10.23□□□□□ -0.77
C9orf85-202ENST00000377027 GTF3C4Q9UKN8 822 aa10.23□□□□□ -0.77
C9orf85-202ENST00000377027 USP18Q9UMW8 372 aa10.23□□□□□ -0.77
C9orf85-202ENST00000377027 PCDHB5Q9Y5E4 795 aa10.23□□□□□ -0.77
C9orf85-202ENST00000377027 GPC6Q9Y625 555 aaPredicted RBP10.23□□□□□ -0.77
C9orf85-202ENST00000377027 TNRC6BQ9UPQ9 1833 aaKnown RBP10.23□□□□□ -0.77
C9orf85-202ENST00000377027 ZZEF1O43149 2961 aa10.23□□□□□ -0.77
C9orf85-202ENST00000377027 NUP205Q92621 2012 aa10.23□□□□□ -0.77
C9orf85-202ENST00000377027 USP24Q9UPU5 2620 aa10.22□□□□□ -0.77
C9orf85-202ENST00000377027 MAP1BP46821 2468 aaKnown RBP10.22□□□□□ -0.77
C9orf85-202ENST00000377027 DCDC2BA2VCK2 349 aa10.22□□□□□ -0.77
C9orf85-202ENST00000377027 C2orf78A6NCI8 922 aa10.22□□□□□ -0.77
C9orf85-202ENST00000377027 TGFB1I1O43294 461 aa10.22□□□□□ -0.77
C9orf85-202ENST00000377027 PRMT3O60678 531 aa10.22□□□□□ -0.77
C9orf85-202ENST00000377027 PRPF40AO75400 957 aaKnown RBP10.22□□□□□ -0.77
C9orf85-202ENST00000377027 EGFP01133 1207 aa10.22□□□□□ -0.77
C9orf85-202ENST00000377027 IDEP14735 1019 aa10.22□□□□□ -0.77
C9orf85-202ENST00000377027 LMO2P25791 158 aa10.22□□□□□ -0.77
C9orf85-202ENST00000377027 CASP1P29466 404 aa10.22□□□□□ -0.77
C9orf85-202ENST00000377027 NASPP49321 788 aaPredicted RBP10.22□□□□□ -0.77
C9orf85-202ENST00000377027 CACNA2D1P54289 1103 aa10.22□□□□□ -0.77
C9orf85-202ENST00000377027 NRLP54845 237 aa10.22□□□□□ -0.77
C9orf85-202ENST00000377027 PSMC1P62191 440 aaKnown RBP10.22□□□□□ -0.77
C9orf85-202ENST00000377027 EHHADHQ08426 723 aa10.22□□□□□ -0.77
C9orf85-202ENST00000377027 BFSP1Q12934 665 aa10.22□□□□□ -0.77
C9orf85-202ENST00000377027 RUNX3Q13761 415 aa10.22□□□□□ -0.77
C9orf85-202ENST00000377027 VEPH1Q14D04 833 aa10.22□□□□□ -0.77
C9orf85-202ENST00000377027 POSTNQ15063 836 aa10.22□□□□□ -0.77
C9orf85-202ENST00000377027 OCLNQ16625 522 aa10.22□□□□□ -0.77
C9orf85-202ENST00000377027 GAB4Q2WGN9 574 aa10.22□□□□□ -0.77
C9orf85-202ENST00000377027 DGKKQ5KSL6 1271 aa10.22□□□□□ -0.77
C9orf85-202ENST00000377027 FAM171BQ6P995 826 aa10.22□□□□□ -0.77
C9orf85-202ENST00000377027 FIGNL1Q6PIW4 674 aa10.22□□□□□ -0.77
C9orf85-202ENST00000377027 PRR23BQ6ZRT6 265 aa10.22□□□□□ -0.77
C9orf85-202ENST00000377027 MON1AQ86VX9 555 aa10.22□□□□□ -0.77
C9orf85-202ENST00000377027 WDR5BQ86VZ2 330 aa10.22□□□□□ -0.77
C9orf85-202ENST00000377027 LONP2Q86WA8 852 aa10.22□□□□□ -0.77
C9orf85-202ENST00000377027 DCP1BQ8IZD4 617 aaKnown RBP10.22□□□□□ -0.77
C9orf85-202ENST00000377027 THEM5Q8N1Q8 247 aa10.22□□□□□ -0.77
C9orf85-202ENST00000377027 PDILTQ8N807 584 aa10.22□□□□□ -0.77
C9orf85-202ENST00000377027 LINC00301Q8NCQ3 95 aa10.22□□□□□ -0.77
C9orf85-202ENST00000377027 TRMT2BQ96GJ1 504 aaKnown RBP10.22□□□□□ -0.77
C9orf85-202ENST00000377027 MYRFLQ96LU7 910 aa10.22□□□□□ -0.77
C9orf85-202ENST00000377027 ACBD6Q9BR61 282 aa10.22□□□□□ -0.77
C9orf85-202ENST00000377027 RXFP3Q9NSD7 469 aa10.22□□□□□ -0.77
C9orf85-202ENST00000377027 PANK4Q9NVE7 773 aa10.22□□□□□ -0.77
C9orf85-202ENST00000377027 GCNT4Q9P109 453 aa10.22□□□□□ -0.77
C9orf85-202ENST00000377027 CCDC39Q9UFE4 941 aa10.22□□□□□ -0.77
C9orf85-202ENST00000377027 ITGA11Q9UKX5 1188 aa10.22□□□□□ -0.77
C9orf85-202ENST00000377027 MAGED2Q9UNF1 606 aaPredicted RBP10.22□□□□□ -0.77
C9orf85-202ENST00000377027 SNX9Q9Y5X1 595 aa10.22□□□□□ -0.77
C9orf85-202ENST00000377027 ACACBO00763 2458 aa10.22□□□□□ -0.77
C9orf85-202ENST00000377027 TPRP12270 2363 aaKnown RBP10.21□□□□□ -0.77
C9orf85-202ENST00000377027 TRDMT1O14717 391 aaKnown RBP10.21□□□□□ -0.77
C9orf85-202ENST00000377027 BNIP3LO60238 219 aa10.21□□□□□ -0.77
C9orf85-202ENST00000377027 RETP07949 1114 aa10.21□□□□□ -0.77
C9orf85-202ENST00000377027 HOXA6P31267 233 aa10.21□□□□□ -0.77
C9orf85-202ENST00000377027 PNPLA4P41247 253 aa10.21□□□□□ -0.77
C9orf85-202ENST00000377027 STAT6P42226 847 aa10.21□□□□□ -0.77
C9orf85-202ENST00000377027 TSPY1Q01534 308 aa10.21□□□□□ -0.77
C9orf85-202ENST00000377027 LMNB2Q03252 620 aa10.21□□□□□ -0.77
C9orf85-202ENST00000377027 SMARCB1Q12824 385 aa10.21□□□□□ -0.77
C9orf85-202ENST00000377027 SIM2Q14190 667 aaPredicted RBP10.21□□□□□ -0.77
C9orf85-202ENST00000377027 ZNF268Q14587 947 aaPredicted RBP10.21□□□□□ -0.77
C9orf85-202ENST00000377027 CFAP221Q4G0U5 840 aa10.21□□□□□ -0.77
C9orf85-202ENST00000377027 C1orf228Q6PIY5 440 aa10.21□□□□□ -0.77
C9orf85-202ENST00000377027 SHC4Q6S5L8 630 aa10.21□□□□□ -0.77
C9orf85-202ENST00000377027 ADGRF2Q8IZF7 708 aa10.21□□□□□ -0.77
C9orf85-202ENST00000377027 GPD1LQ8N335 351 aa10.21□□□□□ -0.77
C9orf85-202ENST00000377027 CSGALNACT2Q8N6G5 542 aa10.21□□□□□ -0.77
C9orf85-202ENST00000377027 TOP6BLQ8N6T0 577 aa10.21□□□□□ -0.77
C9orf85-202ENST00000377027 PLEKHO2Q8TD55 490 aa10.21□□□□□ -0.77
C9orf85-202ENST00000377027 MYLPFQ96A32 169 aa10.21□□□□□ -0.77
C9orf85-202ENST00000377027 TRIM9Q9C026 710 aa10.21□□□□□ -0.77
C9orf85-202ENST00000377027 ABCB6Q9NP58 842 aa10.21□□□□□ -0.77
C9orf85-202ENST00000377027 SEMA4GQ9NTN9 838 aa10.21□□□□□ -0.77
C9orf85-202ENST00000377027 TDP1Q9NUW8 608 aa10.21□□□□□ -0.77
C9orf85-202ENST00000377027 INTS13Q9NVM9 706 aa10.21□□□□□ -0.77
C9orf85-202ENST00000377027 KBTBD4Q9NVX7 518 aa10.21□□□□□ -0.77
C9orf85-202ENST00000377027 GMEB2Q9UKD1 530 aa10.21□□□□□ -0.77
C9orf85-202ENST00000377027 PCDHGC4Q9Y5F7 938 aa10.21□□□□□ -0.77
C9orf85-202ENST00000377027 HUS1O60921 280 aa10.2□□□□□ -0.78
C9orf85-202ENST00000377027 LDHAP00338 332 aaKnown RBP10.2□□□□□ -0.78
C9orf85-202ENST00000377027 CST3P01034 146 aaPredicted RBP10.2□□□□□ -0.78
C9orf85-202ENST00000377027 KRT19P08727 400 aa10.2□□□□□ -0.78
C9orf85-202ENST00000377027 CSH1P0DML2 217 aa10.2□□□□□ -0.78
C9orf85-202ENST00000377027 CSH2P0DML3 217 aa10.2□□□□□ -0.78
C9orf85-202ENST00000377027 LORP23490 312 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms