RNA–Protein interactions for RNA: ENST00000375441.7

CUL4A-203, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 4,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-203ENST00000375441 HPDLQ96IR7 371 aa13.67□□□□□ -0.22
CUL4A-203ENST00000375441 FBXL18Q96ME1 805 aa13.67□□□□□ -0.22
CUL4A-203ENST00000375441 CNPY3Q9BT09 278 aa13.67□□□□□ -0.22
CUL4A-203ENST00000375441 MED10Q9BTT4 135 aa13.67□□□□□ -0.22
CUL4A-203ENST00000375441 KLHL8Q9P2G9 620 aaPredicted RBP13.67□□□□□ -0.22
CUL4A-203ENST00000375441 TLK1Q9UKI8 766 aa13.67□□□□□ -0.22
CUL4A-203ENST00000375441 ATRNL1Q5VV63 1379 aa13.66□□□□□ -0.22
CUL4A-203ENST00000375441 TCRBV9S1A1TA0A576 114 aa13.66□□□□□ -0.22
CUL4A-203ENST00000375441 CREB3O43889 395 aa13.66□□□□□ -0.22
CUL4A-203ENST00000375441 CACNA2D1P54289 1103 aa13.66□□□□□ -0.22
CUL4A-203ENST00000375441 SLC12A2P55011 1212 aa13.66□□□□□ -0.22
CUL4A-203ENST00000375441 RTP1P59025 263 aa13.66□□□□□ -0.22
CUL4A-203ENST00000375441 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.66□□□□□ -0.22
CUL4A-203ENST00000375441 IZUMO2Q6UXV1 221 aa13.66□□□□□ -0.22
CUL4A-203ENST00000375441 MICALL2Q8IY33 904 aa13.66□□□□□ -0.22
CUL4A-203ENST00000375441 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.66□□□□□ -0.22
CUL4A-203ENST00000375441 PPP1R36Q96LQ0 422 aa13.66□□□□□ -0.22
CUL4A-203ENST00000375441 FRMD8Q9BZ67 464 aaPredicted RBP13.66□□□□□ -0.22
CUL4A-203ENST00000375441 GCOM2Q9BZD3 368 aaPredicted RBP13.66□□□□□ -0.22
CUL4A-203ENST00000375441 SLC5A4Q9NY91 659 aa13.66□□□□□ -0.22
CUL4A-203ENST00000375441 SNX9Q9Y5X1 595 aa13.66□□□□□ -0.22
CUL4A-203ENST00000375441 TRPA1O75762 1119 aa13.66□□□□□ -0.22
CUL4A-203ENST00000375441 TPBGLP0DKB5 382 aa13.66□□□□□ -0.22
CUL4A-203ENST00000375441 CCNB1P14635 433 aa13.66□□□□□ -0.22
CUL4A-203ENST00000375441 ADORA2BP29275 332 aa13.66□□□□□ -0.22
CUL4A-203ENST00000375441 TGFB2P61812 414 aa13.66□□□□□ -0.22
CUL4A-203ENST00000375441 MED21Q13503 144 aa13.66□□□□□ -0.22
CUL4A-203ENST00000375441 BLMHQ13867 455 aa13.66□□□□□ -0.22
CUL4A-203ENST00000375441 FSCBQ5H9T9 825 aa13.66□□□□□ -0.22
CUL4A-203ENST00000375441 PDZD4Q76G19 769 aaPredicted RBP13.66□□□□□ -0.22
CUL4A-203ENST00000375441 MAB21L3Q8N8X9 362 aa13.66□□□□□ -0.22
CUL4A-203ENST00000375441 PIP4K2CQ8TBX8 421 aa13.66□□□□□ -0.22
CUL4A-203ENST00000375441 SNX25Q9H3E2 840 aa13.66□□□□□ -0.22
CUL4A-203ENST00000375441 TAGLN3Q9UI15 199 aa13.66□□□□□ -0.22
CUL4A-203ENST00000375441 RABGEF1Q9UJ41 708 aa13.66□□□□□ -0.22
CUL4A-203ENST00000375441 A0A0B4J269 797 aa13.66□□□□□ -0.22
CUL4A-203ENST00000375441 TBC1D12O60347 775 aa13.66□□□□□ -0.22
CUL4A-203ENST00000375441 VNN1O95497 513 aa13.66□□□□□ -0.22
CUL4A-203ENST00000375441 LCP1P13796 627 aa13.66□□□□□ -0.22
CUL4A-203ENST00000375441 SATB1Q01826 763 aa13.66□□□□□ -0.22
CUL4A-203ENST00000375441 CNTN2Q02246 1040 aa13.66□□□□□ -0.22
CUL4A-203ENST00000375441 TRIP10Q15642 601 aa13.66□□□□□ -0.22
CUL4A-203ENST00000375441 GEN1Q17RS7 908 aa13.66□□□□□ -0.22
CUL4A-203ENST00000375441 KHDC1Q4VXA5 237 aaKnown RBP13.66□□□□□ -0.22
CUL4A-203ENST00000375441 ZPBP2Q6X784 338 aa13.66□□□□□ -0.22
CUL4A-203ENST00000375441 SULF1Q8IWU6 871 aa13.66□□□□□ -0.22
CUL4A-203ENST00000375441 CEP120Q8N960 986 aa13.66□□□□□ -0.22
CUL4A-203ENST00000375441 LRRN4Q8WUT4 740 aa13.66□□□□□ -0.22
CUL4A-203ENST00000375441 C10orf82Q8WW14 230 aa13.66□□□□□ -0.22
CUL4A-203ENST00000375441 LRGUKQ96M69 825 aa13.66□□□□□ -0.22
CUL4A-203ENST00000375441 AGAP3Q96P47 875 aa13.66□□□□□ -0.22
CUL4A-203ENST00000375441 MECRQ9BV79 373 aa13.66□□□□□ -0.22
CUL4A-203ENST00000375441 FIS1Q9Y3D6 152 aa13.66□□□□□ -0.22
CUL4A-203ENST00000375441 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.66□□□□□ -0.22
CUL4A-203ENST00000375441 GSC2O15499 205 aa13.65□□□□□ -0.22
CUL4A-203ENST00000375441 PTPN20Q4JDL3 420 aa13.65□□□□□ -0.22
CUL4A-203ENST00000375441 FAM182AQ5T1J6 154 aa13.65□□□□□ -0.22
CUL4A-203ENST00000375441 FKBP1CQ5VVH2 108 aa13.65□□□□□ -0.22
CUL4A-203ENST00000375441 MPZL3Q6UWV2 235 aa13.65□□□□□ -0.22
CUL4A-203ENST00000375441 C4orf50Q6ZRC1 276 aa13.65□□□□□ -0.22
CUL4A-203ENST00000375441 PGBD4Q96DM1 585 aa13.65□□□□□ -0.22
CUL4A-203ENST00000375441 TMEM176AQ96HP8 235 aa13.65□□□□□ -0.22
CUL4A-203ENST00000375441 NT5C1AQ9BXI3 368 aa13.65□□□□□ -0.22
CUL4A-203ENST00000375441 PDGFDQ9GZP0 370 aaPredicted RBP13.65□□□□□ -0.22
CUL4A-203ENST00000375441 FAM96AQ9H5X1 160 aa13.65□□□□□ -0.22
CUL4A-203ENST00000375441 DNAJC16Q9Y2G8 782 aa13.65□□□□□ -0.22
CUL4A-203ENST00000375441 RBL1P28749 1068 aa13.65□□□□□ -0.22
CUL4A-203ENST00000375441 CLCN3P51790 818 aa13.65□□□□□ -0.22
CUL4A-203ENST00000375441 HIRAP54198 1017 aaPredicted RBP13.65□□□□□ -0.22
CUL4A-203ENST00000375441 GDF10P55107 478 aa13.65□□□□□ -0.22
CUL4A-203ENST00000375441 RPL10AP62906 217 aaKnown RBP13.65□□□□□ -0.22
CUL4A-203ENST00000375441 LAMTOR4Q0VGL1 99 aa13.65□□□□□ -0.22
CUL4A-203ENST00000375441 BST1Q10588 318 aa13.65□□□□□ -0.22
CUL4A-203ENST00000375441 KLF1Q13351 362 aaPredicted RBP13.65□□□□□ -0.22
CUL4A-203ENST00000375441 EFCAB12Q6NXP0 572 aa13.65□□□□□ -0.22
CUL4A-203ENST00000375441 IRGCQ6NXR0 463 aa13.65□□□□□ -0.22
CUL4A-203ENST00000375441 PID1Q7Z2X4 250 aa13.65□□□□□ -0.22
CUL4A-203ENST00000375441 ALYREFQ86V81 257 aaKnown RBP13.65□□□□□ -0.22
CUL4A-203ENST00000375441 PAF1Q8N7H5 531 aa13.65□□□□□ -0.22
CUL4A-203ENST00000375441 NMRK1Q9NWW6 199 aa13.65□□□□□ -0.22
CUL4A-203ENST00000375441 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.65□□□□□ -0.22
CUL4A-203ENST00000375441 BHMG1C9JSJ3 638 aaPredicted RBP13.65□□□□□ -0.22
CUL4A-203ENST00000375441 KLHL2O95198 593 aa13.65□□□□□ -0.22
CUL4A-203ENST00000375441 CCNHP51946 323 aaPredicted RBP13.65□□□□□ -0.22
CUL4A-203ENST00000375441 DSG1Q02413 1049 aa13.65□□□□□ -0.22
CUL4A-203ENST00000375441 GAD2Q05329 585 aa13.65□□□□□ -0.22
CUL4A-203ENST00000375441 ART3Q13508 389 aa13.65□□□□□ -0.22
CUL4A-203ENST00000375441 CAPSQ13938 189 aa13.65□□□□□ -0.22
CUL4A-203ENST00000375441 TMEM132DQ14C87 1099 aa13.65□□□□□ -0.22
CUL4A-203ENST00000375441 C15orf59Q2T9L4 293 aaPredicted RBP13.65□□□□□ -0.22
CUL4A-203ENST00000375441 POLNQ7Z5Q5 900 aa13.65□□□□□ -0.22
CUL4A-203ENST00000375441 FAM172AQ8WUF8 416 aa13.65□□□□□ -0.22
CUL4A-203ENST00000375441 FZD1Q9UP38 647 aa13.65□□□□□ -0.22
CUL4A-203ENST00000375441 SHANK3Q9BYB0 1731 aa13.65□□□□□ -0.23
CUL4A-203ENST00000375441 A8MXQ7 604 aa13.64□□□□□ -0.23
CUL4A-203ENST00000375441 C19orf81C9J6K1 198 aa13.64□□□□□ -0.23
CUL4A-203ENST00000375441 PEX11AO75192 247 aa13.64□□□□□ -0.23
CUL4A-203ENST00000375441 LRCH4O75427 683 aa13.64□□□□□ -0.23
CUL4A-203ENST00000375441 IL18RAPO95256 599 aa13.64□□□□□ -0.23
CUL4A-203ENST00000375441 CD48P09326 243 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms