RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 ULK2Q8IYT8 1036 aa12.66□□□□□ -0.38
C9orf3-203ENST00000375315 ZSWIM2Q8NEG5 633 aa12.66□□□□□ -0.38
C9orf3-203ENST00000375315 TMEM120AQ9BXJ8 343 aa12.66□□□□□ -0.38
C9orf3-203ENST00000375315 FBXO40Q9UH90 709 aa12.66□□□□□ -0.38
C9orf3-203ENST00000375315 P4HA2O15460 535 aa12.66□□□□□ -0.38
C9orf3-203ENST00000375315 SPOPO43791 374 aa12.66□□□□□ -0.38
C9orf3-203ENST00000375315 DKC1O60832 514 aaKnown RBP eCLIP12.66□□□□□ -0.383e-6■■□□□ 13.1
C9orf3-203ENST00000375315 TFAP2AP05549 437 aa12.66□□□□□ -0.38
C9orf3-203ENST00000375315 HOXD13P35453 343 aa12.66□□□□□ -0.38
C9orf3-203ENST00000375315 HALP42357 657 aa12.66□□□□□ -0.38
C9orf3-203ENST00000375315 KRT76Q01546 638 aa12.66□□□□□ -0.38
C9orf3-203ENST00000375315 NADK2Q4G0N4 442 aa12.66□□□□□ -0.38
C9orf3-203ENST00000375315 DAW1Q8N136 415 aa12.66□□□□□ -0.38
C9orf3-203ENST00000375315 C1orf54Q8WWF1 131 aa12.66□□□□□ -0.38
C9orf3-203ENST00000375315 MS4A4AQ96JQ5 239 aa12.66□□□□□ -0.38
C9orf3-203ENST00000375315 THTPAQ9BU02 230 aa12.66□□□□□ -0.38
C9orf3-203ENST00000375315 FCHO1O14526 889 aa12.66□□□□□ -0.38
C9orf3-203ENST00000375315 DLATP10515 647 aaKnown RBP12.66□□□□□ -0.38
C9orf3-203ENST00000375315 CPA2P48052 419 aa12.66□□□□□ -0.38
C9orf3-203ENST00000375315 DLG1Q12959 904 aa12.66□□□□□ -0.38
C9orf3-203ENST00000375315 KNOP1Q1ED39 458 aaKnown RBP12.66□□□□□ -0.38
C9orf3-203ENST00000375315 SPRYD7Q5W111 196 aa12.66□□□□□ -0.38
C9orf3-203ENST00000375315 FAM91A1Q658Y4 838 aa12.66□□□□□ -0.38
C9orf3-203ENST00000375315 RELL1Q8IUW5 271 aa12.66□□□□□ -0.38
C9orf3-203ENST00000375315 DEPTORQ8TB45 409 aa12.66□□□□□ -0.38
C9orf3-203ENST00000375315 BTBD9Q96Q07 612 aa12.66□□□□□ -0.38
C9orf3-203ENST00000375315 MRPS26Q9BYN8 205 aaKnown RBP12.66□□□□□ -0.38
C9orf3-203ENST00000375315 S100A14Q9HCY8 104 aa12.66□□□□□ -0.38
C9orf3-203ENST00000375315 PLK2Q9NYY3 685 aa12.66□□□□□ -0.38
C9orf3-203ENST00000375315 PCDHA2Q9Y5H9 948 aa12.66□□□□□ -0.38
C9orf3-203ENST00000375315 GTPBP10A4D1E9 387 aaKnown RBP12.65□□□□□ -0.38
C9orf3-203ENST00000375315 WDR91A4D1P6 747 aa12.65□□□□□ -0.38
C9orf3-203ENST00000375315 MATN2O00339 956 aa12.65□□□□□ -0.38
C9orf3-203ENST00000375315 PSAPP07602 524 aa12.65□□□□□ -0.38
C9orf3-203ENST00000375315 TXNP10599 105 aaKnown RBP12.65□□□□□ -0.38
C9orf3-203ENST00000375315 IVDP26440 423 aa12.65□□□□□ -0.38
C9orf3-203ENST00000375315 GTF2A2P52657 109 aa12.65□□□□□ -0.38
C9orf3-203ENST00000375315 AQP4P55087 323 aa12.65□□□□□ -0.38
C9orf3-203ENST00000375315 TRIP13Q15645 432 aaPredicted RBP12.65□□□□□ -0.38
C9orf3-203ENST00000375315 C3orf62Q6ZUJ4 267 aa12.65□□□□□ -0.38
C9orf3-203ENST00000375315 ICA1LQ8NDH6 482 aa12.65□□□□□ -0.38
C9orf3-203ENST00000375315 ZFP28Q8NHY6 868 aa12.65□□□□□ -0.38
C9orf3-203ENST00000375315 OLIG1Q8TAK6 271 aa12.65□□□□□ -0.38
C9orf3-203ENST00000375315 GPRASP2Q96D09 838 aa12.65□□□□□ -0.38
C9orf3-203ENST00000375315 VPS50Q96JG6 964 aa12.65□□□□□ -0.38
C9orf3-203ENST00000375315 HNRNPABQ99729 332 aaKnown RBP12.65□□□□□ -0.38
C9orf3-203ENST00000375315 TSSK1BQ9BXA7 367 aa12.65□□□□□ -0.38
C9orf3-203ENST00000375315 Q9H521 79 aa12.65□□□□□ -0.38
C9orf3-203ENST00000375315 GINS2Q9Y248 185 aa12.65□□□□□ -0.38
C9orf3-203ENST00000375315 HBS1LQ9Y450 684 aaKnown RBP12.65□□□□□ -0.38
C9orf3-203ENST00000375315 SH3PXD2BA1X283 911 aa12.65□□□□□ -0.38
C9orf3-203ENST00000375315 SPECC1L-ADORA2AF8WAN1 911 aa12.65□□□□□ -0.38
C9orf3-203ENST00000375315 ATP2A1O14983 1001 aa12.65□□□□□ -0.38
C9orf3-203ENST00000375315 TYROBPO43914 113 aa12.65□□□□□ -0.38
C9orf3-203ENST00000375315 CSDE1O75534 798 aaKnown RBP12.65□□□□□ -0.38
C9orf3-203ENST00000375315 TRIM49P0CI25 452 aa12.65□□□□□ -0.38
C9orf3-203ENST00000375315 TRIM49CP0CI26 452 aa12.65□□□□□ -0.38
C9orf3-203ENST00000375315 FGFR1P11362 822 aa12.65□□□□□ -0.38
C9orf3-203ENST00000375315 MAGEA4P43358 317 aa12.65□□□□□ -0.38
C9orf3-203ENST00000375315 MSLNQ13421 630 aaPredicted RBP12.65□□□□□ -0.38
C9orf3-203ENST00000375315 DRAP1Q14919 205 aaPredicted RBP12.65□□□□□ -0.38
C9orf3-203ENST00000375315 RASA2Q15283 850 aa12.65□□□□□ -0.38
C9orf3-203ENST00000375315 PRR11Q96HE9 360 aaPredicted RBP12.65□□□□□ -0.38
C9orf3-203ENST00000375315 OXNAD1Q96HP4 312 aaPredicted RBP12.65□□□□□ -0.38
C9orf3-203ENST00000375315 PWWP2AQ96N64 755 aa12.65□□□□□ -0.38
C9orf3-203ENST00000375315 EIF2AQ9BY44 585 aaKnown RBP12.65□□□□□ -0.38
C9orf3-203ENST00000375315 RBM38Q9H0Z9 239 aaKnown RBP12.65□□□□□ -0.38
C9orf3-203ENST00000375315 MANSC1Q9H8J5 431 aa12.65□□□□□ -0.38
C9orf3-203ENST00000375315 TAS2R14Q9NYV8 317 aa12.65□□□□□ -0.38
C9orf3-203ENST00000375315 SLC7A8Q9UHI5 535 aa12.65□□□□□ -0.38
C9orf3-203ENST00000375315 FADS3Q9Y5Q0 445 aa12.65□□□□□ -0.38
C9orf3-203ENST00000375315 DOCK5Q9H7D0 1870 aa12.65□□□□□ -0.39
C9orf3-203ENST00000375315 CALUO43852 315 aaPredicted RBP12.64□□□□□ -0.39
C9orf3-203ENST00000375315 GJB1P08034 283 aa12.64□□□□□ -0.39
C9orf3-203ENST00000375315 TCF7P36402 384 aaPredicted RBP12.64□□□□□ -0.39
C9orf3-203ENST00000375315 RAB15P59190 212 aa12.64□□□□□ -0.39
C9orf3-203ENST00000375315 KRT81Q14533 505 aa12.64□□□□□ -0.39
C9orf3-203ENST00000375315 KIF22Q14807 665 aa12.64□□□□□ -0.39
C9orf3-203ENST00000375315 TAF1CQ15572 869 aaPredicted RBP12.64□□□□□ -0.39
C9orf3-203ENST00000375315 NANOGNBQ7Z5D8 188 aa12.64□□□□□ -0.39
C9orf3-203ENST00000375315 TMEM110Q86TL2 294 aa12.64□□□□□ -0.39
C9orf3-203ENST00000375315 LRRC71Q8N4P6 559 aa12.64□□□□□ -0.39
C9orf3-203ENST00000375315 RBM15BQ8NDT2 890 aaKnown RBP12.64□□□□□ -0.39
C9orf3-203ENST00000375315 PLEKHO2Q8TD55 490 aa12.64□□□□□ -0.39
C9orf3-203ENST00000375315 DDI1Q8WTU0 396 aa12.64□□□□□ -0.39
C9orf3-203ENST00000375315 SPATA33Q96N06 139 aa12.64□□□□□ -0.39
C9orf3-203ENST00000375315 FOXP3Q9BZS1 431 aa12.64□□□□□ -0.39
C9orf3-203ENST00000375315 GRIP2Q9C0E4 1043 aa12.64□□□□□ -0.39
C9orf3-203ENST00000375315 PLGRKTQ9HBL7 147 aa12.64□□□□□ -0.39
C9orf3-203ENST00000375315 ZNF302Q9NR11 478 aa12.64□□□□□ -0.39
C9orf3-203ENST00000375315 SPATA31C2B4DYI2 1134 aa12.64□□□□□ -0.39
C9orf3-203ENST00000375315 SERPINB7O75635 380 aa12.64□□□□□ -0.39
C9orf3-203ENST00000375315 AKAP3O75969 853 aa12.64□□□□□ -0.39
C9orf3-203ENST00000375315 STK10O94804 968 aaKnown RBP12.64□□□□□ -0.39
C9orf3-203ENST00000375315 TGDSO95455 350 aa12.64□□□□□ -0.39
C9orf3-203ENST00000375315 JAK3P52333 1124 aa12.64□□□□□ -0.39
C9orf3-203ENST00000375315 GPC5P78333 572 aa12.64□□□□□ -0.39
C9orf3-203ENST00000375315 B3GNT9Q6UX72 402 aa12.64□□□□□ -0.39
C9orf3-203ENST00000375315 GDPD5Q8WTR4 605 aa12.64□□□□□ -0.39
C9orf3-203ENST00000375315 KCNN1Q92952 543 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms