RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 SPC25Q9HBM1 224 aa12.78□□□□□ -0.36
UBR4-203ENST00000375225 FGFR1OP2Q9NVK5 253 aa12.78□□□□□ -0.36
UBR4-203ENST00000375225 EURLQ9NYK6 297 aa12.78□□□□□ -0.36
UBR4-203ENST00000375225 PAK5Q9P286 719 aa12.78□□□□□ -0.36
UBR4-203ENST00000375225 CTNNAL1Q9UBT7 734 aa12.78□□□□□ -0.36
UBR4-203ENST00000375225 SLC12A4Q9UP95 1085 aa12.78□□□□□ -0.36
UBR4-203ENST00000375225 FARP1Q9Y4F1 1045 aaPredicted RBP12.78□□□□□ -0.36
UBR4-203ENST00000375225 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.78□□□□□ -0.36
UBR4-203ENST00000375225 EVPLQ92817 2033 aa12.78□□□□□ -0.36
UBR4-203ENST00000375225 DUSP11O75319 330 aaKnown RBP12.78□□□□□ -0.36
UBR4-203ENST00000375225 ZSCAN5DPP0CG00 497 aa12.78□□□□□ -0.36
UBR4-203ENST00000375225 CYBAP13498 195 aa12.78□□□□□ -0.36
UBR4-203ENST00000375225 TCF4P15884 667 aa12.78□□□□□ -0.36
UBR4-203ENST00000375225 MSH2P43246 934 aa12.78□□□□□ -0.36
UBR4-203ENST00000375225 GPD2P43304 727 aa12.78□□□□□ -0.36
UBR4-203ENST00000375225 CDH8P55286 799 aa12.78□□□□□ -0.36
UBR4-203ENST00000375225 GRIK4Q16099 956 aa12.78□□□□□ -0.36
UBR4-203ENST00000375225 AMHR2Q16671 573 aa12.78□□□□□ -0.36
UBR4-203ENST00000375225 EFHC2Q5JST6 749 aa12.78□□□□□ -0.36
UBR4-203ENST00000375225 UBAP2Q5T6F2 1119 aaKnown RBP12.78□□□□□ -0.36
UBR4-203ENST00000375225 DARS2Q6PI48 645 aaKnown RBP12.78□□□□□ -0.36
UBR4-203ENST00000375225 CEP120Q8N960 986 aa12.78□□□□□ -0.36
UBR4-203ENST00000375225 NAT8LQ8N9F0 302 aa12.78□□□□□ -0.36
UBR4-203ENST00000375225 GDAP1Q8TB36 358 aa12.78□□□□□ -0.36
UBR4-203ENST00000375225 LRRC8CQ8TDW0 803 aa12.78□□□□□ -0.36
UBR4-203ENST00000375225 HSPH1Q92598 858 aa12.78□□□□□ -0.36
UBR4-203ENST00000375225 KAT2BQ92831 832 aa12.78□□□□□ -0.36
UBR4-203ENST00000375225 APBB2Q92870 758 aa12.78□□□□□ -0.36
UBR4-203ENST00000375225 CALN1Q9BXU9 219 aa12.78□□□□□ -0.36
UBR4-203ENST00000375225 PRDM16Q9HAZ2 1276 aa12.78□□□□□ -0.36
UBR4-203ENST00000375225 RXFP1Q9HBX9 757 aa12.78□□□□□ -0.36
UBR4-203ENST00000375225 STARD13Q9Y3M8 1113 aa12.78□□□□□ -0.36
UBR4-203ENST00000375225 IQANK1A0A1B0GTG1 560 aa12.77□□□□□ -0.37
UBR4-203ENST00000375225 E7ESA3 106 aa12.77□□□□□ -0.37
UBR4-203ENST00000375225 DNM1LO00429 736 aa12.77□□□□□ -0.37
UBR4-203ENST00000375225 TM9SF1O15321 606 aa12.77□□□□□ -0.37
UBR4-203ENST00000375225 KPNA6O60684 536 aa12.77□□□□□ -0.37
UBR4-203ENST00000375225 ATP2C2O75185 946 aa12.77□□□□□ -0.37
UBR4-203ENST00000375225 F2P00734 622 aa12.77□□□□□ -0.37
UBR4-203ENST00000375225 RBP3P10745 1247 aa12.77□□□□□ -0.37
UBR4-203ENST00000375225 PDGFRAP16234 1089 aa12.77□□□□□ -0.37
UBR4-203ENST00000375225 ARF4P18085 180 aaPredicted RBP12.77□□□□□ -0.37
UBR4-203ENST00000375225 SKIV2L2P42285 1042 aaKnown RBP12.77□□□□□ -0.37
UBR4-203ENST00000375225 NDST1P52848 882 aa12.77□□□□□ -0.37
UBR4-203ENST00000375225 CDH6P55285 790 aa12.77□□□□□ -0.37
UBR4-203ENST00000375225 CCDC142Q17RM4 750 aa12.77□□□□□ -0.37
UBR4-203ENST00000375225 SMTNL2Q2TAL5 461 aa12.77□□□□□ -0.37
UBR4-203ENST00000375225 SLC10A6Q3KNW5 377 aa12.77□□□□□ -0.37
UBR4-203ENST00000375225 FYB2Q5VWT5 728 aa12.77□□□□□ -0.37
UBR4-203ENST00000375225 UNC93AQ86WB7 457 aa12.77□□□□□ -0.37
UBR4-203ENST00000375225 PARP9Q8IXQ6 854 aa12.77□□□□□ -0.37
UBR4-203ENST00000375225 LRRC52Q8N7C0 313 aa12.77□□□□□ -0.37
UBR4-203ENST00000375225 SPATA18Q8TC71 538 aa12.77□□□□□ -0.37
UBR4-203ENST00000375225 CD99L2Q8TCZ2 262 aa12.77□□□□□ -0.37
UBR4-203ENST00000375225 MAGEC3Q8TD91 643 aa12.77□□□□□ -0.37
UBR4-203ENST00000375225 STK32AQ8WU08 396 aa12.77□□□□□ -0.37
UBR4-203ENST00000375225 PAIP2Q9BPZ3 127 aaKnown RBP12.77□□□□□ -0.37
UBR4-203ENST00000375225 GCOM2Q9BZD3 368 aaPredicted RBP12.77□□□□□ -0.37
UBR4-203ENST00000375225 SDCBP2Q9H190 292 aa12.77□□□□□ -0.37
UBR4-203ENST00000375225 MINDY3Q9H8M7 445 aa12.77□□□□□ -0.37
UBR4-203ENST00000375225 CYLDQ9NQC7 956 aa12.77□□□□□ -0.37
UBR4-203ENST00000375225 SAGE1Q9NXZ1 904 aa12.77□□□□□ -0.37
UBR4-203ENST00000375225 SRRDQ9UH36 339 aa12.77□□□□□ -0.37
UBR4-203ENST00000375225 PCSK1NQ9UHG2 260 aa12.77□□□□□ -0.37
UBR4-203ENST00000375225 XPO7Q9UIA9 1087 aaKnown RBP12.77□□□□□ -0.37
UBR4-203ENST00000375225 RALGAPA2Q2PPJ7 1873 aa12.76□□□□□ -0.37
UBR4-203ENST00000375225 NRCAMQ92823 1304 aa12.76□□□□□ -0.37
UBR4-203ENST00000375225 C2CD4BA6NLJ0 364 aa12.76□□□□□ -0.37
UBR4-203ENST00000375225 H7C0C1 242 aa12.76□□□□□ -0.37
UBR4-203ENST00000375225 APOL1O14791 398 aa12.76□□□□□ -0.37
UBR4-203ENST00000375225 CHADO15335 359 aa12.76□□□□□ -0.37
UBR4-203ENST00000375225 SEPT4O43236 478 aa12.76□□□□□ -0.37
UBR4-203ENST00000375225 TSPAN1O60635 241 aa12.76□□□□□ -0.37
UBR4-203ENST00000375225 DCTN3O75935 186 aa12.76□□□□□ -0.37
UBR4-203ENST00000375225 MYL3P08590 195 aa12.76□□□□□ -0.37
UBR4-203ENST00000375225 GSTA2P09210 222 aa12.76□□□□□ -0.37
UBR4-203ENST00000375225 RARBP10826 455 aa12.76□□□□□ -0.37
UBR4-203ENST00000375225 CA4P22748 312 aa12.76□□□□□ -0.37
UBR4-203ENST00000375225 IL1R2P27930 398 aa12.76□□□□□ -0.37
UBR4-203ENST00000375225 AXLP30530 894 aa12.76□□□□□ -0.37
UBR4-203ENST00000375225 SDC4P31431 198 aa12.76□□□□□ -0.37
UBR4-203ENST00000375225 RPL22P35268 128 aaKnown RBP12.76□□□□□ -0.37
UBR4-203ENST00000375225 SCNN1AP37088 669 aa12.76□□□□□ -0.37
UBR4-203ENST00000375225 ATP5OP48047 213 aa12.76□□□□□ -0.37
UBR4-203ENST00000375225 BASP1P80723 227 aaKnown RBP12.76□□□□□ -0.37
UBR4-203ENST00000375225 MFSD10Q14728 455 aa12.76□□□□□ -0.37
UBR4-203ENST00000375225 NOMO1Q15155 1222 aa12.76□□□□□ -0.37
UBR4-203ENST00000375225 PDK4Q16654 411 aa12.76□□□□□ -0.37
UBR4-203ENST00000375225 FSCN1Q16658 493 aaKnown RBP12.76□□□□□ -0.37
UBR4-203ENST00000375225 GOLGA7BQ2TAP0 167 aa12.76□□□□□ -0.37
UBR4-203ENST00000375225 SWT1Q5T5J6 900 aaKnown RBP12.76□□□□□ -0.37
UBR4-203ENST00000375225 LGSNQ5TDP6 509 aa12.76□□□□□ -0.37
UBR4-203ENST00000375225 TXNRD3NBQ6F5E7 133 aa12.76□□□□□ -0.37
UBR4-203ENST00000375225 CYB5D1Q6P9G0 228 aa12.76□□□□□ -0.37
UBR4-203ENST00000375225 FUKQ8N0W3 1084 aa12.76□□□□□ -0.37
UBR4-203ENST00000375225 CPT1BQ92523 772 aa12.76□□□□□ -0.37
UBR4-203ENST00000375225 LENG1Q96BZ8 264 aaPredicted RBP12.76□□□□□ -0.37
UBR4-203ENST00000375225 CPB2Q96IY4 423 aa12.76□□□□□ -0.37
UBR4-203ENST00000375225 PWWP2AQ96N64 755 aa12.76□□□□□ -0.37
UBR4-203ENST00000375225 CYTH2Q99418 400 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms