RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 GJA1P17302 382 aa11.6□□□□□ -0.55
HLA-DQA1-202ENST00000374949 ACO1P21399 889 aaKnown RBP11.6□□□□□ -0.55
HLA-DQA1-202ENST00000374949 SDHBP21912 280 aa11.6□□□□□ -0.55
HLA-DQA1-202ENST00000374949 GDI1P31150 447 aa11.6□□□□□ -0.55
HLA-DQA1-202ENST00000374949 VIPR2P41587 438 aa11.6□□□□□ -0.55
HLA-DQA1-202ENST00000374949 GUCY2FP51841 1108 aa11.6□□□□□ -0.55
HLA-DQA1-202ENST00000374949 ARHGAP8P85298 464 aa11.6□□□□□ -0.55
HLA-DQA1-202ENST00000374949 SPEM2Q0P670 501 aa11.6□□□□□ -0.55
HLA-DQA1-202ENST00000374949 WDR72Q3MJ13 1102 aa11.6□□□□□ -0.55
HLA-DQA1-202ENST00000374949 PRR23BQ6ZRT6 265 aa11.6□□□□□ -0.55
HLA-DQA1-202ENST00000374949 RTL10Q7L3V2 364 aa11.6□□□□□ -0.55
HLA-DQA1-202ENST00000374949 HS6ST3Q8IZP7 471 aa11.6□□□□□ -0.55
HLA-DQA1-202ENST00000374949 ACRBPQ8NEB7 543 aa11.6□□□□□ -0.55
HLA-DQA1-202ENST00000374949 C18orf25Q96B23 403 aaPredicted RBP11.6□□□□□ -0.55
HLA-DQA1-202ENST00000374949 PPP1R13BQ96KQ4 1090 aa11.6□□□□□ -0.55
HLA-DQA1-202ENST00000374949 ZSWIM3Q96MP5 696 aa11.6□□□□□ -0.55
HLA-DQA1-202ENST00000374949 ASB16Q96NS5 453 aa11.6□□□□□ -0.55
HLA-DQA1-202ENST00000374949 AGPAT1Q99943 283 aa11.6□□□□□ -0.55
HLA-DQA1-202ENST00000374949 TRMT61BQ9BVS5 477 aaKnown RBP11.6□□□□□ -0.55
HLA-DQA1-202ENST00000374949 FAM126AQ9BYI3 521 aaPredicted RBP11.6□□□□□ -0.55
HLA-DQA1-202ENST00000374949 NIF3L1Q9GZT8 377 aa11.6□□□□□ -0.55
HLA-DQA1-202ENST00000374949 VRTNQ9H8Y1 702 aa11.6□□□□□ -0.55
HLA-DQA1-202ENST00000374949 LUC7LQ9NQ29 371 aaKnown RBP11.6□□□□□ -0.55
HLA-DQA1-202ENST00000374949 SLC38A7Q9NVC3 462 aa11.6□□□□□ -0.55
HLA-DQA1-202ENST00000374949 NXF1Q9UBU9 619 aaKnown RBP11.6□□□□□ -0.55
HLA-DQA1-202ENST00000374949 ADAMTS1Q9UHI8 967 aa11.6□□□□□ -0.55
HLA-DQA1-202ENST00000374949 CNTN6Q9UQ52 1028 aa11.6□□□□□ -0.55
HLA-DQA1-202ENST00000374949 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.6□□□□□ -0.55
HLA-DQA1-202ENST00000374949 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.6□□□□□ -0.55
HLA-DQA1-202ENST00000374949 PIAS3Q9Y6X2 628 aa11.6□□□□□ -0.55
HLA-DQA1-202ENST00000374949 ANO9A1A5B4 782 aa11.59□□□□□ -0.55
HLA-DQA1-202ENST00000374949 MAN2B1O00754 1011 aa11.59□□□□□ -0.55
HLA-DQA1-202ENST00000374949 MOSPD3O75425 235 aa11.59□□□□□ -0.55
HLA-DQA1-202ENST00000374949 MYL4P12829 197 aa11.59□□□□□ -0.55
HLA-DQA1-202ENST00000374949 ATF2P15336 505 aa11.59□□□□□ -0.55
HLA-DQA1-202ENST00000374949 MAGEA1P43355 309 aa11.59□□□□□ -0.55
HLA-DQA1-202ENST00000374949 CYP27A1Q02318 531 aa11.59□□□□□ -0.55
HLA-DQA1-202ENST00000374949 GFPT1Q06210 699 aaPredicted RBP11.59□□□□□ -0.55
HLA-DQA1-202ENST00000374949 TWF1Q12792 350 aa11.59□□□□□ -0.55
HLA-DQA1-202ENST00000374949 SLC18A3Q16572 532 aa11.59□□□□□ -0.55
HLA-DQA1-202ENST00000374949 CTXN3Q4LDR2 81 aa11.59□□□□□ -0.55
HLA-DQA1-202ENST00000374949 C10orf76Q5T2E6 689 aa11.59□□□□□ -0.55
HLA-DQA1-202ENST00000374949 C9orf57Q5W0N0 161 aa11.59□□□□□ -0.55
HLA-DQA1-202ENST00000374949 KIAA1328Q86T90 577 aa11.59□□□□□ -0.55
HLA-DQA1-202ENST00000374949 TCEAL8Q8IYN2 117 aa11.59□□□□□ -0.55
HLA-DQA1-202ENST00000374949 TMEM130Q8N3G9 435 aa11.59□□□□□ -0.55
HLA-DQA1-202ENST00000374949 TXLNBQ8N3L3 684 aa11.59□□□□□ -0.55
HLA-DQA1-202ENST00000374949 LRRC52Q8N7C0 313 aa11.59□□□□□ -0.55
HLA-DQA1-202ENST00000374949 ZSCAN18Q8TBC5 510 aaPredicted RBP11.59□□□□□ -0.55
HLA-DQA1-202ENST00000374949 FAM3CQ92520 227 aa11.59□□□□□ -0.55
HLA-DQA1-202ENST00000374949 SMARCD2Q92925 531 aa11.59□□□□□ -0.55
HLA-DQA1-202ENST00000374949 RTKNQ9BST9 563 aa11.59□□□□□ -0.55
HLA-DQA1-202ENST00000374949 CYP3A43Q9HB55 503 aa11.59□□□□□ -0.55
HLA-DQA1-202ENST00000374949 ZNF334Q9HCZ1 680 aaPredicted RBP11.59□□□□□ -0.55
HLA-DQA1-202ENST00000374949 TUBGCP4Q9UGJ1 667 aa11.59□□□□□ -0.55
HLA-DQA1-202ENST00000374949 RAB23Q9ULC3 237 aa11.59□□□□□ -0.55
HLA-DQA1-202ENST00000374949 REXO2Q9Y3B8 237 aaKnown RBP11.59□□□□□ -0.55
HLA-DQA1-202ENST00000374949 PCDHA13Q9Y5I0 950 aa11.59□□□□□ -0.55
HLA-DQA1-202ENST00000374949 RALGAPA1Q6GYQ0 2036 aa11.59□□□□□ -0.55
HLA-DQA1-202ENST00000374949 A0A087X0T9 212 aa11.58□□□□□ -0.56
HLA-DQA1-202ENST00000374949 H7C4K7 107 aa11.58□□□□□ -0.56
HLA-DQA1-202ENST00000374949 PIRO00625 290 aa11.58□□□□□ -0.56
HLA-DQA1-202ENST00000374949 ZNF197O14709 1029 aa11.58□□□□□ -0.56
HLA-DQA1-202ENST00000374949 ZNF263O14978 683 aa11.58□□□□□ -0.56
HLA-DQA1-202ENST00000374949 SYN3O14994 580 aa11.58□□□□□ -0.56
HLA-DQA1-202ENST00000374949 TUBB4AP04350 444 aa11.58□□□□□ -0.56
HLA-DQA1-202ENST00000374949 FAM228BP0C875 321 aa11.58□□□□□ -0.56
HLA-DQA1-202ENST00000374949 PSMC3P17980 439 aa11.58□□□□□ -0.56
HLA-DQA1-202ENST00000374949 LRPAP1P30533 357 aa11.58□□□□□ -0.56
HLA-DQA1-202ENST00000374949 PNPLA4P41247 253 aa11.58□□□□□ -0.56
HLA-DQA1-202ENST00000374949 SOX9P48436 509 aa11.58□□□□□ -0.56
HLA-DQA1-202ENST00000374949 CCR3P51677 355 aa11.58□□□□□ -0.56
HLA-DQA1-202ENST00000374949 TNNC1P63316 161 aa11.58□□□□□ -0.56
HLA-DQA1-202ENST00000374949 SATB1Q01826 763 aa11.58□□□□□ -0.56
HLA-DQA1-202ENST00000374949 DMWDQ09019 674 aa11.58□□□□□ -0.56
HLA-DQA1-202ENST00000374949 SRSF5Q13243 272 aaKnown RBP11.58□□□□□ -0.56
HLA-DQA1-202ENST00000374949 TEAD2Q15562 447 aa11.58□□□□□ -0.56
HLA-DQA1-202ENST00000374949 CCDC122Q5T0U0 273 aa11.58□□□□□ -0.56
HLA-DQA1-202ENST00000374949 CYP4A22Q5TCH4 519 aa11.58□□□□□ -0.56
HLA-DQA1-202ENST00000374949 LAIR1Q6GTX8 287 aa11.58□□□□□ -0.56
HLA-DQA1-202ENST00000374949 ZNF280DQ6N043 979 aa11.58□□□□□ -0.56
HLA-DQA1-202ENST00000374949 ZNF662Q6ZS27 426 aa11.58□□□□□ -0.56
HLA-DQA1-202ENST00000374949 ELMOD1Q8N336 334 aa11.58□□□□□ -0.56
HLA-DQA1-202ENST00000374949 TTC39CQ8N584 583 aa11.58□□□□□ -0.56
HLA-DQA1-202ENST00000374949 UBR7Q8N806 425 aa11.58□□□□□ -0.56
HLA-DQA1-202ENST00000374949 SLC30A5Q8TAD4 765 aa11.58□□□□□ -0.56
HLA-DQA1-202ENST00000374949 IRF7Q92985 503 aa11.58□□□□□ -0.56
HLA-DQA1-202ENST00000374949 ARID3AQ99856 593 aa11.58□□□□□ -0.56
HLA-DQA1-202ENST00000374949 SYT11Q9BT88 431 aa11.58□□□□□ -0.56
HLA-DQA1-202ENST00000374949 IER2Q9BTL4 223 aa11.58□□□□□ -0.56
HLA-DQA1-202ENST00000374949 FAM124BQ9H5Z6 455 aaPredicted RBP11.58□□□□□ -0.56
HLA-DQA1-202ENST00000374949 LMAN1LQ9HAT1 526 aa11.58□□□□□ -0.56
HLA-DQA1-202ENST00000374949 RRAGDQ9NQL2 400 aaPredicted RBP11.58□□□□□ -0.56
HLA-DQA1-202ENST00000374949 ASAH2Q9NR71 780 aa11.58□□□□□ -0.56
HLA-DQA1-202ENST00000374949 CISHQ9NSE2 258 aa11.58□□□□□ -0.56
HLA-DQA1-202ENST00000374949 YIPF1Q9Y548 306 aa11.58□□□□□ -0.56
HLA-DQA1-202ENST00000374949 CNOT1A5YKK6 2376 aaKnown RBP11.58□□□□□ -0.56
HLA-DQA1-202ENST00000374949 TSC2P49815 1807 aa11.58□□□□□ -0.56
HLA-DQA1-202ENST00000374949 ANK1P16157 1881 aa11.57□□□□□ -0.56
HLA-DQA1-202ENST00000374949 NUP210Q8TEM1 1887 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms