RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 FIGNQ5HY92 759 aa8.27□□□□□ -1.09
USP48-203ENST00000374732 CAVIN1Q6NZI2 390 aaKnown RBP8.27□□□□□ -1.09
USP48-203ENST00000374732 C4orf22Q6V702 233 aa8.27□□□□□ -1.09
USP48-203ENST00000374732 EPM2AIP1Q7L775 607 aaPredicted RBP8.27□□□□□ -1.09
USP48-203ENST00000374732 LPCAT1Q8NF37 534 aa8.27□□□□□ -1.09
USP48-203ENST00000374732 NKX2-3Q8TAU0 364 aa8.27□□□□□ -1.09
USP48-203ENST00000374732 ZNF671Q8TAW3 534 aa8.27□□□□□ -1.09
USP48-203ENST00000374732 SLC44A1Q8WWI5 657 aa8.27□□□□□ -1.09
USP48-203ENST00000374732 TRIM63Q969Q1 353 aa8.27□□□□□ -1.09
USP48-203ENST00000374732 NUP58Q9BVL2 599 aa8.27□□□□□ -1.09
USP48-203ENST00000374732 SMOC1Q9H4F8 434 aa8.27□□□□□ -1.09
USP48-203ENST00000374732 PRDM11Q9NQV5 511 aa8.27□□□□□ -1.09
USP48-203ENST00000374732 TAS2R7Q9NYW3 318 aa8.27□□□□□ -1.09
USP48-203ENST00000374732 SPATA2Q9UM82 520 aa8.27□□□□□ -1.09
USP48-203ENST00000374732 MAPRE3Q9UPY8 281 aa8.27□□□□□ -1.09
USP48-203ENST00000374732 NAALAD2Q9Y3Q0 740 aa8.27□□□□□ -1.09
USP48-203ENST00000374732 C5P01031 1676 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 COL15A1P39059 1388 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 SRGAP3O43295 1099 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 ECE2O60344 883 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 AOC2O75106 756 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 SLITRK5O94991 958 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 SCAF4O95104 1147 aaKnown RBP8.26□□□□□ -1.09
USP48-203ENST00000374732 LUC7L3O95232 432 aaKnown RBP8.26□□□□□ -1.09
USP48-203ENST00000374732 G0S2P27469 103 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 EIF4A3P38919 411 aaKnown RBP8.26□□□□□ -1.09
USP48-203ENST00000374732 PEX6Q13608 980 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 TAF5Q15542 800 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 ALG11Q2TAA5 492 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 KCTD21Q4G0X4 260 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 PDCD4Q53EL6 469 aaKnown RBP8.26□□□□□ -1.09
USP48-203ENST00000374732 ZMYM1Q5SVZ6 1142 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 CYP4A22Q5TCH4 519 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 ZNF790Q6PG37 636 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 TRMT44Q8IYL2 757 aaKnown RBP8.26□□□□□ -1.09
USP48-203ENST00000374732 GATA6Q92908 595 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 DCAF5Q96JK2 942 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 CEP170P1Q96L14 293 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 FGD4Q96M96 766 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 SLC4A9Q96Q91 983 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 DHRS9Q9BPW9 319 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 HEPHQ9BQS7 1158 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 PRKD2Q9BZL6 878 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 ZNF518BQ9C0D4 1074 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 GOLPH3LQ9H4A5 285 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 ZDHHC4Q9NPG8 344 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 PLSCR4Q9NRQ2 329 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 RMND1Q9NWS8 449 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 CTNNAL1Q9UBT7 734 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 SHANK3Q9BYB0 1731 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 KIAA1217Q5T5P2 1943 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 MROH5Q6ZUA9 1318 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 ERVV-2B6SEH9 535 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 FPGTO14772 594 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 STX10O60499 249 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 PRDM1O75626 825 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 SASH3O75995 380 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 FARP2O94887 1054 aaPredicted RBP8.26□□□□□ -1.09
USP48-203ENST00000374732 CHGBP05060 677 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 ITGB3P05106 788 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 SNRNP70P08621 437 aaKnown RBP8.26□□□□□ -1.09
USP48-203ENST00000374732 USP17L8P0C7I0 530 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 TRHRP34981 398 aaPredicted RBP8.26□□□□□ -1.09
USP48-203ENST00000374732 IL6STP40189 918 aaPredicted RBP8.26□□□□□ -1.09
USP48-203ENST00000374732 ETV5P41161 510 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 ATXN1P54253 815 aaKnown RBP8.26□□□□□ -1.09
USP48-203ENST00000374732 DCAF7P61962 342 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 LPIN1Q14693 890 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 DIXDC1Q155Q3 683 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 SMTNL2Q2TAL5 461 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 RPUSD3Q6P087 351 aaKnown RBP8.26□□□□□ -1.09
USP48-203ENST00000374732 SCYL2Q6P3W7 929 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 SLC22A25Q6T423 547 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 CATSPERGQ6ZRH7 1159 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 ZNF677Q86XU0 584 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 FAM71DQ8N9W8 422 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 FLAD1Q8NFF5 587 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 GANCQ8TET4 914 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 GPRASP2Q96D09 838 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 MTFMTQ96DP5 389 aaKnown RBP8.26□□□□□ -1.09
USP48-203ENST00000374732 TRIM47Q96LD4 638 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 ZDHHC15Q96MV8 337 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 PINK1Q9BXM7 581 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 TXLNGYQ9BZA5 131 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 PALMDQ9NP74 551 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 VTA1Q9NP79 307 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 BRD7Q9NPI1 651 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 KIF17Q9P2E2 1029 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 APOBEC2Q9Y235 224 aaKnown RBP8.26□□□□□ -1.09
USP48-203ENST00000374732 MAP3K2Q9Y2U5 619 aa8.26□□□□□ -1.09
USP48-203ENST00000374732 LAMB4A4D0S4 1761 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 GSAPA4D1B5 854 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 SYCE1LA8MT33 242 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 GOLGA8KD6RF30 607 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 STARD3NLO95772 234 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 CAPN1P07384 714 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 CRABP2P29373 138 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 HOXA11P31270 313 aaPredicted RBP8.25□□□□□ -1.09
USP48-203ENST00000374732 CTNNB1P35222 781 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 KRT9P35527 623 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms