RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 H2AFJQ9BTM1 129 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 NUP85Q9BW27 656 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 FBXL5Q9UKA1 691 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 H2AFYO75367 372 aaKnown RBP6.52□□□□□ -1.37
PTPN3-202ENST00000374541 PDE5AO76074 875 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 CYP21A2P08686 494 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 SPATA31D3P0C874 917 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 MAGEA10P43363 369 aaPredicted RBP6.52□□□□□ -1.37
PTPN3-202ENST00000374541 CLCN3P51790 818 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 POU5F1BQ06416 359 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 KCNH2Q12809 1159 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 GPS1Q13098 491 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 CCL14Q16627 93 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 SPATA31D4Q6ZUB0 917 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 MICU2Q8IYU8 434 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 USP38Q8NB14 1042 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 PXYLP1Q8TE99 480 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 ZNF473Q8WTR7 871 aaKnown RBP6.52□□□□□ -1.37
PTPN3-202ENST00000374541 FAR2Q96K12 515 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 NUSAP1Q9BXS6 441 aaKnown RBP6.52□□□□□ -1.37
PTPN3-202ENST00000374541 AIPL1Q9NZN9 384 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 CD207Q9UJ71 328 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 CA14Q9ULX7 337 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 ADGRG1Q9Y653 693 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 NRCAMQ92823 1304 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 NBNO60934 754 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 TGFB3P10600 412 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 ZNF543Q08ER8 600 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 ARHGEF7Q14155 803 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 CRYMQ14894 314 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 TMEM154Q6P9G4 183 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 GUF1Q8N442 669 aaKnown RBP6.52□□□□□ -1.37
PTPN3-202ENST00000374541 HELQQ8TDG4 1101 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 LXNQ9BS40 222 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 PRRG3Q9BZD7 231 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 SP110Q9HB58 689 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 CNGB3Q9NQW8 809 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 TMEM161AQ9NX61 479 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 TRPC5OSA6NMA1 111 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 H3BQ06 376 aaPredicted RBP6.52□□□□□ -1.37
PTPN3-202ENST00000374541 GUCA1CO95843 209 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 SMIM10L2AP0DMW4 78 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 SMIM10L2BP0DMW5 78 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 ALPPL2P10696 532 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 SDHBP21912 280 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 CD52P31358 61 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 YWHABP31946 246 aaKnown RBP6.52□□□□□ -1.37
PTPN3-202ENST00000374541 SPDYE7PQ495Y7 208 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 ARMCX4Q5H9R4 360 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 ZNF544Q6NX49 715 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 LONP2Q86WA8 852 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 MFN1Q8IWA4 741 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 SMYD4Q8IYR2 804 aaPredicted RBP6.52□□□□□ -1.37
PTPN3-202ENST00000374541 RCOR2Q8IZ40 523 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 MSL3Q8N5Y2 521 aaKnown RBP6.52□□□□□ -1.37
PTPN3-202ENST00000374541 RAD9AQ99638 391 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 PARVAQ9NVD7 372 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 CDYLQ9Y232 598 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 MAP2P11137 1827 aaKnown RBP6.52□□□□□ -1.37
PTPN3-202ENST00000374541 ADGRA3Q8IWK6 1321 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 CCDC195A0A1B0GUA6 201 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 APOL1O14791 398 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 CCL16O15467 120 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 CSF1RP07333 972 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 KITP10721 976 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 INSRRP14616 1297 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 SMPD1P17405 629 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 THOP1P52888 689 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 ARID5BQ14865 1188 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 PDIA6Q15084 440 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 LPAL2Q16609 132 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 CCDC142Q17RM4 750 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 NOMO2Q5JPE7 1267 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 RAD54LQ92698 747 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 OSBPL10Q9BXB5 764 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 HDAC6Q9UBN7 1215 aa6.52□□□□□ -1.37
PTPN3-202ENST00000374541 hCG_2014768A0A024R1R8 64 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 APODP05090 189 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 KRT20P35900 424 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 TRIP10Q15642 601 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 TRIP4Q15650 581 aaPredicted RBP6.51□□□□□ -1.37
PTPN3-202ENST00000374541 PTCRAQ6ISU1 281 aaPredicted RBP6.51□□□□□ -1.37
PTPN3-202ENST00000374541 PKN3Q6P5Z2 889 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 DSG4Q86SJ6 1040 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 FBXO32Q969P5 355 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 WDR18Q9BV38 432 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 INTS2Q9H0H0 1204 aaKnown RBP6.51□□□□□ -1.37
PTPN3-202ENST00000374541 DSEQ9UL01 958 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 VPS9D1Q9Y2B5 631 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 SF3B1O75533 1304 aaKnown RBP eCLIP6.51□□□□□ -1.37
PTPN3-202ENST00000374541 TRAV19A0A0A6YYK7 116 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 INPP4BO15327 924 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 SLC16A4O15374 487 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 PHF2O75151 1096 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 CSF2RAP15509 400 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 CENPCQ03188 943 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 ELOA2Q8IYF1 753 aaPredicted RBP6.51□□□□□ -1.37
PTPN3-202ENST00000374541 MAN1C1Q9NR34 630 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 SOX13Q9UN79 622 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 A0A1W2PQ45 241 aaPredicted RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms