RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 PLEKHA5Q9HAU0 1116 aa12.66□□□□□ -0.38
HMGCL-202ENST00000374487 SAYSD1Q9NPB0 183 aa12.66□□□□□ -0.38
HMGCL-202ENST00000374487 SNTG2Q9NY99 539 aa12.66□□□□□ -0.38
HMGCL-202ENST00000374487 GGA2Q9UJY4 613 aa12.66□□□□□ -0.38
HMGCL-202ENST00000374487 TSPAN16Q9UKR8 245 aa12.66□□□□□ -0.38
HMGCL-202ENST00000374487 USP18Q9UMW8 372 aa12.66□□□□□ -0.38
HMGCL-202ENST00000374487 SZT2Q5T011 3432 aa12.66□□□□□ -0.38
HMGCL-202ENST00000374487 STAT4Q14765 748 aa12.66□□□□□ -0.38
HMGCL-202ENST00000374487 MORF4L2Q15014 288 aa12.66□□□□□ -0.38
HMGCL-202ENST00000374487 RFX6Q8HWS3 928 aa12.66□□□□□ -0.38
HMGCL-202ENST00000374487 CACNA2D3Q8IZS8 1091 aa12.66□□□□□ -0.38
HMGCL-202ENST00000374487 C12orf29Q8N999 325 aa12.66□□□□□ -0.38
HMGCL-202ENST00000374487 SLC35B2Q8TB61 432 aa12.66□□□□□ -0.38
HMGCL-202ENST00000374487 DYDC1Q8WWB3 177 aa12.66□□□□□ -0.38
HMGCL-202ENST00000374487 RSAD2Q8WXG1 361 aa12.66□□□□□ -0.38
HMGCL-202ENST00000374487 SCLYQ96I15 445 aa12.66□□□□□ -0.38
HMGCL-202ENST00000374487 CFAP57Q96MR6 1250 aa12.66□□□□□ -0.38
HMGCL-202ENST00000374487 TOX2Q96NM4 488 aa12.66□□□□□ -0.38
HMGCL-202ENST00000374487 PRMT1Q99873 361 aaKnown RBP12.66□□□□□ -0.38
HMGCL-202ENST00000374487 MAK16Q9BXY0 300 aaKnown RBP12.66□□□□□ -0.38
HMGCL-202ENST00000374487 FRMD8P1Q9BZ68 369 aaPredicted RBP12.66□□□□□ -0.38
HMGCL-202ENST00000374487 TRIM6Q9C030 488 aaPredicted RBP12.66□□□□□ -0.38
HMGCL-202ENST00000374487 PCDH9Q9HC56 1237 aa12.66□□□□□ -0.38
HMGCL-202ENST00000374487 KCNK9Q9NPC2 374 aa12.66□□□□□ -0.38
HMGCL-202ENST00000374487 CTNNAL1Q9UBT7 734 aa12.66□□□□□ -0.38
HMGCL-202ENST00000374487 TBK1Q9UHD2 729 aa12.66□□□□□ -0.38
HMGCL-202ENST00000374487 SNX9Q9Y5X1 595 aa12.66□□□□□ -0.38
HMGCL-202ENST00000374487 SCN10AQ9Y5Y9 1956 aa12.65□□□□□ -0.38
HMGCL-202ENST00000374487 CDH16O75309 829 aa12.65□□□□□ -0.38
HMGCL-202ENST00000374487 TCEA3O75764 348 aa12.65□□□□□ -0.38
HMGCL-202ENST00000374487 PDGFRAP16234 1089 aa12.65□□□□□ -0.38
HMGCL-202ENST00000374487 PECAM1P16284 738 aaPredicted RBP12.65□□□□□ -0.38
HMGCL-202ENST00000374487 ZNF143P52747 638 aaPredicted RBP12.65□□□□□ -0.38
HMGCL-202ENST00000374487 STILQ15468 1287 aa12.65□□□□□ -0.38
HMGCL-202ENST00000374487 QPCTQ16769 361 aa12.65□□□□□ -0.38
HMGCL-202ENST00000374487 NOTUMQ6P988 496 aa12.65□□□□□ -0.38
HMGCL-202ENST00000374487 BBS12Q6ZW61 710 aa12.65□□□□□ -0.38
HMGCL-202ENST00000374487 C7orf31Q8N865 590 aa12.65□□□□□ -0.38
HMGCL-202ENST00000374487 ATXN2LQ8WWM7 1075 aaKnown RBP12.65□□□□□ -0.38
HMGCL-202ENST00000374487 SEC16BQ96JE7 1060 aa12.65□□□□□ -0.38
HMGCL-202ENST00000374487 GDF15Q99988 308 aa12.65□□□□□ -0.38
HMGCL-202ENST00000374487 CNPY3Q9BT09 278 aa12.65□□□□□ -0.38
HMGCL-202ENST00000374487 ADAMTS10Q9H324 1103 aa12.65□□□□□ -0.38
HMGCL-202ENST00000374487 ANK1P16157 1881 aa12.65□□□□□ -0.38
HMGCL-202ENST00000374487 NRCAMQ92823 1304 aa12.65□□□□□ -0.38
HMGCL-202ENST00000374487 ATXN2Q99700 1313 aaKnown RBP12.65□□□□□ -0.38
HMGCL-202ENST00000374487 E5RJQ4 531 aa12.64□□□□□ -0.39
HMGCL-202ENST00000374487 KIAA0355O15063 1070 aa12.64□□□□□ -0.39
HMGCL-202ENST00000374487 KPNA6O60684 536 aa12.64□□□□□ -0.39
HMGCL-202ENST00000374487 TRUB2O95900 331 aaKnown RBP12.64□□□□□ -0.39
HMGCL-202ENST00000374487 CD48P09326 243 aa12.64□□□□□ -0.39
HMGCL-202ENST00000374487 SMIM10L2AP0DMW4 78 aa12.64□□□□□ -0.39
HMGCL-202ENST00000374487 SMIM10L2BP0DMW5 78 aa12.64□□□□□ -0.39
HMGCL-202ENST00000374487 ACRP10323 421 aa12.64□□□□□ -0.39
HMGCL-202ENST00000374487 RAG1P15918 1043 aa12.64□□□□□ -0.39
HMGCL-202ENST00000374487 GPD1P21695 349 aa12.64□□□□□ -0.39
HMGCL-202ENST00000374487 HOXA11P31270 313 aaPredicted RBP12.64□□□□□ -0.39
HMGCL-202ENST00000374487 IFNAR2P48551 515 aa12.64□□□□□ -0.39
HMGCL-202ENST00000374487 LIG3P49916 1009 aa12.64□□□□□ -0.39
HMGCL-202ENST00000374487 GOLGA7BQ2TAP0 167 aa12.64□□□□□ -0.39
HMGCL-202ENST00000374487 YTHDF3Q7Z739 585 aaKnown RBP12.64□□□□□ -0.39
HMGCL-202ENST00000374487 PCGF5Q86SE9 256 aa12.64□□□□□ -0.39
HMGCL-202ENST00000374487 ACOT1Q86TX2 421 aa12.64□□□□□ -0.39
HMGCL-202ENST00000374487 TAX1BP1Q86VP1 789 aa12.64□□□□□ -0.39
HMGCL-202ENST00000374487 BEST2Q8NFU1 509 aa12.64□□□□□ -0.39
HMGCL-202ENST00000374487 CMASQ8NFW8 434 aaPredicted RBP12.64□□□□□ -0.39
HMGCL-202ENST00000374487 TTC25Q96NG3 672 aa12.64□□□□□ -0.39
HMGCL-202ENST00000374487 OSMRQ99650 979 aa12.64□□□□□ -0.39
HMGCL-202ENST00000374487 OSBPL7Q9BZF2 842 aa12.64□□□□□ -0.39
HMGCL-202ENST00000374487 PRKAG2Q9UGJ0 569 aa12.64□□□□□ -0.39
HMGCL-202ENST00000374487 DERAQ9Y315 318 aa12.64□□□□□ -0.39
HMGCL-202ENST00000374487 TMEM120BA0PK00 339 aa12.64□□□□□ -0.39
HMGCL-202ENST00000374487 TREHO43280 583 aa12.64□□□□□ -0.39
HMGCL-202ENST00000374487 GRAP2O75791 330 aa12.64□□□□□ -0.39
HMGCL-202ENST00000374487 VIMP08670 466 aaKnown RBP12.64□□□□□ -0.39
HMGCL-202ENST00000374487 CSF2RAP15509 400 aa12.64□□□□□ -0.39
HMGCL-202ENST00000374487 DRD4P21917 467 aa12.64□□□□□ -0.39
HMGCL-202ENST00000374487 PCK1P35558 622 aa12.64□□□□□ -0.39
HMGCL-202ENST00000374487 RGS7P49802 495 aa12.64□□□□□ -0.39
HMGCL-202ENST00000374487 TAF5Q15542 800 aa12.64□□□□□ -0.39
HMGCL-202ENST00000374487 CDO1Q16878 200 aa12.64□□□□□ -0.39
HMGCL-202ENST00000374487 HP1BP3Q5SSJ5 553 aaPredicted RBP12.64□□□□□ -0.39
HMGCL-202ENST00000374487 C9orf50Q5SZB4 431 aa12.64□□□□□ -0.39
HMGCL-202ENST00000374487 CENPUQ71F23 418 aa12.64□□□□□ -0.39
HMGCL-202ENST00000374487 TADA2BQ86TJ2 420 aa12.64□□□□□ -0.39
HMGCL-202ENST00000374487 MICALL1Q8N3F8 863 aa12.64□□□□□ -0.39
HMGCL-202ENST00000374487 MGARPQ8TDB4 240 aa12.64□□□□□ -0.39
HMGCL-202ENST00000374487 RXFP2Q8WXD0 754 aa12.64□□□□□ -0.39
HMGCL-202ENST00000374487 EIF2AQ9BY44 585 aaKnown RBP12.64□□□□□ -0.39
HMGCL-202ENST00000374487 PRO3102Q9H379 93 aa12.64□□□□□ -0.39
HMGCL-202ENST00000374487 HIPK3Q9H422 1215 aa12.64□□□□□ -0.39
HMGCL-202ENST00000374487 RSAD1Q9HA92 442 aa12.64□□□□□ -0.39
HMGCL-202ENST00000374487 CDHR5Q9HBB8 845 aa12.64□□□□□ -0.39
HMGCL-202ENST00000374487 HESX1Q9UBX0 185 aa12.64□□□□□ -0.39
HMGCL-202ENST00000374487 GTF2IRD1Q9UHL9 959 aa12.64□□□□□ -0.39
HMGCL-202ENST00000374487 SHOC2Q9UQ13 582 aa12.64□□□□□ -0.39
HMGCL-202ENST00000374487 NAALADL1Q9UQQ1 740 aa12.64□□□□□ -0.39
HMGCL-202ENST00000374487 HES2Q9Y543 173 aa12.64□□□□□ -0.39
HMGCL-202ENST00000374487 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.64□□□□□ -0.39
HMGCL-202ENST00000374487 EXOC1LA0A1B0GW35 172 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms