RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 HOXD10P28358 340 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 ELK3P41970 407 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 SCNN1GP51170 649 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 RAD23BP54727 409 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 GEMIN4P57678 1058 aaKnown RBP8.11□□□□□ -1.11
HERC4-202ENST00000373700 TSPY1Q01534 308 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 ATG16L1Q676U5 607 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 IQSEC1Q6DN90 963 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 CHADLQ6NUI6 762 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 FOXR2Q6PJQ5 311 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 DENND5BQ6ZUT9 1274 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 ARID3BQ8IVW6 561 aaPredicted RBP8.11□□□□□ -1.11
HERC4-202ENST00000373700 SLC2A14Q8TDB8 520 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 CRYGNQ8WXF5 182 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 EIF2AQ9BY44 585 aaKnown RBP8.11□□□□□ -1.11
HERC4-202ENST00000373700 APOBEC3GQ9HC16 384 aaKnown RBP8.11□□□□□ -1.11
HERC4-202ENST00000373700 BFARQ9NZS9 450 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 TSR3Q9UJK0 312 aaKnown RBP8.11□□□□□ -1.11
HERC4-202ENST00000373700 MYH11P35749 1972 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 GIPC1O14908 333 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 OPHN1O60890 802 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 AP1G2O75843 785 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 THOC5Q13769 683 aaKnown RBP8.11□□□□□ -1.11
HERC4-202ENST00000373700 MMEL1Q495T6 779 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 DCAF12L1Q5VU92 463 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 SLC27A1Q6PCB7 646 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 CES3Q6UWW8 571 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 EXOC3L1Q86VI1 746 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 JOSD2Q8TAC2 188 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 NPLOC4Q8TAT6 608 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 NDRG1Q92597 394 aaKnown RBP8.11□□□□□ -1.11
HERC4-202ENST00000373700 ZBED3Q96IU2 234 aaPredicted RBP8.11□□□□□ -1.11
HERC4-202ENST00000373700 SEPT5Q99719 369 aaPredicted RBP8.11□□□□□ -1.11
HERC4-202ENST00000373700 ZBED2Q9BTP6 218 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 B3GNT5Q9BYG0 378 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 SLCO1B3Q9NPD5 702 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.11□□□□□ -1.114e-7■□□□□ 10.5
HERC4-202ENST00000373700 TUBGCP4Q9UGJ1 667 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 UBQLN1Q9UMX0 589 aaKnown RBP8.11□□□□□ -1.11
HERC4-202ENST00000373700 L3MBTL1Q9Y468 752 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 M0QYT0 321 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 CLDN5O00501 218 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 NEMP1O14524 444 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 MICAL2O94851 1124 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 PRKAR2AP13861 404 aaKnown RBP8.11□□□□□ -1.11
HERC4-202ENST00000373700 HTRA3P83110 453 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 DEUP1Q05D60 604 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 GLB1LQ6UWU2 654 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 RNF180Q86T96 592 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 LONP2Q86WA8 852 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 LRRC6Q86X45 466 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 MIB1Q86YT6 1006 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 CDKL3Q8IVW4 592 aaPredicted RBP8.11□□□□□ -1.11
HERC4-202ENST00000373700 ADGRF2Q8IZF7 708 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 THEM5Q8N1Q8 247 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 MREGQ8N565 214 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 MFSD14AQ96MC6 490 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 TMEM237Q96Q45 408 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 MYCBPQ99417 103 aaPredicted RBP8.11□□□□□ -1.11
HERC4-202ENST00000373700 C12orf65Q9H3J6 166 aaKnown RBP8.11□□□□□ -1.11
HERC4-202ENST00000373700 PCYOX1Q9UHG3 505 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 SMG5Q9UPR3 1016 aaKnown RBP8.11□□□□□ -1.11
HERC4-202ENST00000373700 USH1CQ9Y6N9 552 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 SCN9AQ15858 1988 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 KNL1Q8NG31 2342 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 RPTORQ8N122 1335 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 KCNK1O00180 336 aa8.1□□□□□ -1.11
HERC4-202ENST00000373700 MMP3P08254 477 aa8.1□□□□□ -1.11
HERC4-202ENST00000373700 PYGBP11216 843 aa8.1□□□□□ -1.11
HERC4-202ENST00000373700 TPI1P60174 286 aa8.1□□□□□ -1.11
HERC4-202ENST00000373700 CRADDP78560 199 aa8.1□□□□□ -1.11
HERC4-202ENST00000373700 SLC12A1Q13621 1099 aa8.1□□□□□ -1.11
HERC4-202ENST00000373700 FAM110CQ1W6H9 321 aa8.1□□□□□ -1.11
HERC4-202ENST00000373700 DUSP28Q4G0W2 176 aa8.1□□□□□ -1.11
HERC4-202ENST00000373700 MYLK4Q86YV6 388 aaPredicted RBP8.1□□□□□ -1.11
HERC4-202ENST00000373700 TRIM42Q8IWZ5 723 aa8.1□□□□□ -1.11
HERC4-202ENST00000373700 OR6P1Q8NGX9 317 aa8.1□□□□□ -1.11
HERC4-202ENST00000373700 PDCD6IPQ8WUM4 868 aaKnown RBP8.1□□□□□ -1.11
HERC4-202ENST00000373700 HDAC11Q96DB2 347 aa8.1□□□□□ -1.11
HERC4-202ENST00000373700 ADAM2Q99965 735 aa8.1□□□□□ -1.11
HERC4-202ENST00000373700 SPON2Q9BUD6 331 aa8.1□□□□□ -1.11
HERC4-202ENST00000373700 UNKQ9C0B0 810 aaKnown RBP8.1□□□□□ -1.11
HERC4-202ENST00000373700 AVENQ9NQS1 362 aaPredicted RBP8.1□□□□□ -1.11
HERC4-202ENST00000373700 NOCTQ9UK39 431 aaKnown RBP8.1□□□□□ -1.11
HERC4-202ENST00000373700 APOBEC2Q9Y235 224 aaKnown RBP8.1□□□□□ -1.11
HERC4-202ENST00000373700 TRIM17Q9Y577 477 aa8.1□□□□□ -1.11
HERC4-202ENST00000373700 CDY2AQ9Y6F7 541 aa8.1□□□□□ -1.11
HERC4-202ENST00000373700 LTBP3Q9NS15 1303 aa8.1□□□□□ -1.11
HERC4-202ENST00000373700 DNALI1O14645 258 aaPredicted RBP8.1□□□□□ -1.11
HERC4-202ENST00000373700 USP12O75317 370 aa8.1□□□□□ -1.11
HERC4-202ENST00000373700 THP07101 528 aa8.1□□□□□ -1.11
HERC4-202ENST00000373700 VDRP11473 427 aa8.1□□□□□ -1.11
HERC4-202ENST00000373700 CD52P31358 61 aa8.1□□□□□ -1.11
HERC4-202ENST00000373700 ARL2P36404 184 aa8.1□□□□□ -1.11
HERC4-202ENST00000373700 NRLP54845 237 aa8.1□□□□□ -1.11
HERC4-202ENST00000373700 NBPF20Q3BBV1 942 aa8.1□□□□□ -1.11
HERC4-202ENST00000373700 MGAT5BQ3V5L5 792 aa8.1□□□□□ -1.11
HERC4-202ENST00000373700 BZW1Q7L1Q6 419 aaKnown RBP8.1□□□□□ -1.11
HERC4-202ENST00000373700 PLPPR4Q7Z2D5 763 aa8.1□□□□□ -1.11
HERC4-202ENST00000373700 RASGEF1CQ8N431 466 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms