RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 CDC42EP4Q9H3Q1 356 aaKnown RBP10.99□□□□□ -0.65
PGK1-201ENST00000373316 MPP6Q9NZW5 540 aa10.99□□□□□ -0.65
PGK1-201ENST00000373316 APPL1Q9UKG1 709 aa10.99□□□□□ -0.65
PGK1-201ENST00000373316 ADAM28Q9UKQ2 775 aa10.99□□□□□ -0.65
PGK1-201ENST00000373316 ZNF646O15015 1829 aaPredicted RBP10.99□□□□□ -0.65
PGK1-201ENST00000373316 RNF103-CHMP3A0A140T963 221 aa10.99□□□□□ -0.65
PGK1-201ENST00000373316 KLRC4O43908 158 aa10.99□□□□□ -0.65
PGK1-201ENST00000373316 ODC1P11926 461 aa10.99□□□□□ -0.65
PGK1-201ENST00000373316 ADORA2BP29275 332 aa10.99□□□□□ -0.65
PGK1-201ENST00000373316 BACE1P56817 501 aa10.99□□□□□ -0.65
PGK1-201ENST00000373316 GRTP1Q5TC63 336 aa10.99□□□□□ -0.65
PGK1-201ENST00000373316 C9orf131Q5VYM1 1079 aa10.99□□□□□ -0.65
PGK1-201ENST00000373316 RNF219Q5W0B1 726 aaPredicted RBP10.99□□□□□ -0.65
PGK1-201ENST00000373316 LRRC8EQ6NSJ5 796 aa10.99□□□□□ -0.65
PGK1-201ENST00000373316 METTL7BQ6UX53 244 aa10.99□□□□□ -0.65
PGK1-201ENST00000373316 ADA2Q9NZK5 511 aa10.99□□□□□ -0.65
PGK1-201ENST00000373316 RGPD3A6NKT7 1758 aaPredicted RBP10.99□□□□□ -0.65
PGK1-201ENST00000373316 RGPD4Q7Z3J3 1758 aa10.99□□□□□ -0.65
PGK1-201ENST00000373316 DLEC1Q9Y238 1755 aa10.99□□□□□ -0.65
PGK1-201ENST00000373316 OPLAHO14841 1288 aa10.99□□□□□ -0.65
PGK1-201ENST00000373316 HOXA2O43364 376 aa10.99□□□□□ -0.65
PGK1-201ENST00000373316 WFS1O76024 890 aa10.99□□□□□ -0.65
PGK1-201ENST00000373316 RAB27AP51159 221 aa10.99□□□□□ -0.65
PGK1-201ENST00000373316 KRR1Q13601 381 aaKnown RBP10.99□□□□□ -0.65
PGK1-201ENST00000373316 ECM1Q16610 540 aa10.99□□□□□ -0.65
PGK1-201ENST00000373316 SPANXN3Q5MJ09 141 aa10.99□□□□□ -0.65
PGK1-201ENST00000373316 POLNQ7Z5Q5 900 aa10.99□□□□□ -0.65
PGK1-201ENST00000373316 UNC45BQ8IWX7 931 aa10.99□□□□□ -0.65
PGK1-201ENST00000373316 SLC30A5Q8TAD4 765 aa10.99□□□□□ -0.65
PGK1-201ENST00000373316 NPHS2Q9NP85 383 aa10.99□□□□□ -0.65
PGK1-201ENST00000373316 TJP2Q9UDY2 1190 aa10.99□□□□□ -0.65
PGK1-201ENST00000373316 FZD9O00144 591 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 DEAF1O75398 565 aaPredicted RBP10.98□□□□□ -0.65
PGK1-201ENST00000373316 TRPA1O75762 1119 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 SGPL1O95470 568 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 APRTP07741 180 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 FAM200BP0CF97 657 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 MAPK1P28482 360 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 DSG1Q02413 1049 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 GPR162Q16538 588 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 GRAMD4Q6IC98 578 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 KYAT3Q6YP21 454 aaKnown RBP10.98□□□□□ -0.65
PGK1-201ENST00000373316 BRSK2Q8IWQ3 736 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 CCNYL1Q8N7R7 359 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 GPRC5AQ8NFJ5 357 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 FOPNLQ96NB1 174 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 SRPK1Q96SB4 655 aaKnown RBP10.98□□□□□ -0.65
PGK1-201ENST00000373316 CCDC28BQ9BUN5 200 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 R3HDMLQ9H3Y0 253 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 LRRC19Q9H756 370 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 TBC1D13Q9NVG8 400 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 DPP3Q9NY33 737 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 SOX13Q9UN79 622 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 FOCADQ5VW36 1801 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 ZBTB22O15209 634 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 SOAT2O75908 522 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 ITGA4P13612 1032 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 KCNA4P22459 653 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 GTF2BQ00403 316 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 SF3A3Q12874 501 aaKnown RBP eCLIP10.98□□□□□ -0.651e-16■■■■■ 28
PGK1-201ENST00000373316 ACMSDQ8TDX5 336 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 SKA2Q8WVK7 121 aaPredicted RBP10.98□□□□□ -0.65
PGK1-201ENST00000373316 CEP19Q96LK0 163 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 SLC13A1Q9BZW2 595 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 FAM170AA1A519 330 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 H7C4K7 107 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 ZBTB39O15060 712 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 KDM1AO60341 852 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 GNL1P36915 607 aaPredicted RBP10.98□□□□□ -0.65
PGK1-201ENST00000373316 ACOT2P49753 483 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 USP10Q14694 798 aaKnown RBP10.98□□□□□ -0.65
PGK1-201ENST00000373316 RNF43Q68DV7 783 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 SLC30A9Q6PML9 568 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 KCNK18Q7Z418 384 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 TMEM143Q96AN5 459 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 PDCD2LQ9BRP1 358 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 METTL5Q9NRN9 209 aaKnown RBP10.98□□□□□ -0.65
PGK1-201ENST00000373316 LSM7Q9UK45 103 aaKnown RBP10.98□□□□□ -0.65
PGK1-201ENST00000373316 SUPT3HO75486 399 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 HMGCRP04035 888 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 EFCAB12Q6NXP0 572 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 LRRC55Q6ZSA7 311 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 LRRC49Q8IUZ0 686 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 GLIS3Q8NEA6 775 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 APOPT1Q96IL0 206 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 CLMNQ96JQ2 1002 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 C9orf72Q96LT7 481 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 TAAR1Q96RJ0 339 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 SH3GL1Q99961 368 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 TMEM109Q9BVC6 243 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 EFCAB1Q9HAE3 211 aa10.98□□□□□ -0.65
PGK1-201ENST00000373316 SYCE1LA8MT33 242 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 NFIBO00712 420 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 CXCL11O14625 94 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 ABLIM1O14639 778 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 CASP2P42575 452 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 AIF1P55008 147 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 POU5F1Q01860 360 aaKnown RBP10.97□□□□□ -0.65
PGK1-201ENST00000373316 BST2Q10589 180 aaKnown RBP10.97□□□□□ -0.65
PGK1-201ENST00000373316 TMPRSS6Q8IU80 811 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms