RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 EFR3BQ9Y2G0 817 aa14.79□□□□□ -0.04
LDB3-204ENST00000372066 TRPV2Q9Y5S1 764 aa14.79□□□□□ -0.04
LDB3-204ENST00000372066 SQORQ9Y6N5 450 aa14.79□□□□□ -0.04
LDB3-204ENST00000372066 SIGLEC16A6NMB1 481 aa14.78□□□□□ -0.04
LDB3-204ENST00000372066 DCXO43602 365 aa14.78□□□□□ -0.04
LDB3-204ENST00000372066 VTNP04004 478 aa14.78□□□□□ -0.04
LDB3-204ENST00000372066 CD19P15391 556 aa14.78□□□□□ -0.04
LDB3-204ENST00000372066 HOXD11P31277 338 aaPredicted RBP14.78□□□□□ -0.04
LDB3-204ENST00000372066 ZP2Q05996 745 aa14.78□□□□□ -0.04
LDB3-204ENST00000372066 ADCY2Q08462 1091 aa14.78□□□□□ -0.04
LDB3-204ENST00000372066 NFX1Q12986 1120 aaKnown RBP14.78□□□□□ -0.04
LDB3-204ENST00000372066 CTC1Q2NKJ3 1217 aa14.78□□□□□ -0.04
LDB3-204ENST00000372066 KRT71Q3SY84 523 aa14.78□□□□□ -0.04
LDB3-204ENST00000372066 ZNF394Q53GI3 561 aa14.78□□□□□ -0.04
LDB3-204ENST00000372066 C2CD6Q53TS8 623 aa14.78□□□□□ -0.04
LDB3-204ENST00000372066 ODF2Q5BJF6 829 aa14.78□□□□□ -0.04
LDB3-204ENST00000372066 KCTD16Q68DU8 428 aa14.78□□□□□ -0.04
LDB3-204ENST00000372066 LLGL2Q6P1M3 1020 aa14.78□□□□□ -0.04
LDB3-204ENST00000372066 NPAS4Q8IUM7 802 aa14.78□□□□□ -0.04
LDB3-204ENST00000372066 C1orf54Q8WWF1 131 aa14.78□□□□□ -0.04
LDB3-204ENST00000372066 LINC01599Q8WXQ3 324 aa14.78□□□□□ -0.04
LDB3-204ENST00000372066 PGM2Q96G03 612 aa14.78□□□□□ -0.04
LDB3-204ENST00000372066 TMEM176AQ96HP8 235 aa14.78□□□□□ -0.04
LDB3-204ENST00000372066 ZNF668Q96K58 619 aaPredicted RBP14.78□□□□□ -0.04
LDB3-204ENST00000372066 TSPAN18Q96SJ8 248 aa14.78□□□□□ -0.04
LDB3-204ENST00000372066 FRMD8P1Q9BZ68 369 aaPredicted RBP14.78□□□□□ -0.04
LDB3-204ENST00000372066 GCOM2Q9BZD3 368 aaPredicted RBP14.78□□□□□ -0.04
LDB3-204ENST00000372066 ASIC3Q9UHC3 531 aa14.78□□□□□ -0.04
LDB3-204ENST00000372066 PADI3Q9ULW8 664 aa14.78□□□□□ -0.04
LDB3-204ENST00000372066 POLIQ9UNA4 740 aa14.78□□□□□ -0.04
LDB3-204ENST00000372066 USTQ9Y2C2 406 aa14.78□□□□□ -0.04
LDB3-204ENST00000372066 MRPL42Q9Y6G3 142 aaKnown RBP14.78□□□□□ -0.04
LDB3-204ENST00000372066 KRT1P04264 644 aa14.77□□□□□ -0.04
LDB3-204ENST00000372066 ATF2P15336 505 aa14.77□□□□□ -0.04
LDB3-204ENST00000372066 IBSPP21815 317 aaPredicted RBP14.77□□□□□ -0.04
LDB3-204ENST00000372066 AXLP30530 894 aa14.77□□□□□ -0.04
LDB3-204ENST00000372066 SSR1P43307 286 aaKnown RBP14.77□□□□□ -0.04
LDB3-204ENST00000372066 KCNJ1P48048 391 aa14.77□□□□□ -0.04
LDB3-204ENST00000372066 RPL7AP62424 266 aaKnown RBP14.77□□□□□ -0.04
LDB3-204ENST00000372066 DLX2Q07687 328 aaPredicted RBP14.77□□□□□ -0.04
LDB3-204ENST00000372066 PAN2Q504Q3 1202 aaKnown RBP14.77□□□□□ -0.04
LDB3-204ENST00000372066 DENND1BQ6P3S1 775 aa14.77□□□□□ -0.04
LDB3-204ENST00000372066 RHBDF2Q6PJF5 856 aa14.77□□□□□ -0.04
LDB3-204ENST00000372066 PHLDB2Q86SQ0 1253 aa14.77□□□□□ -0.04
LDB3-204ENST00000372066 CDR2LQ86X02 465 aaPredicted RBP14.77□□□□□ -0.04
LDB3-204ENST00000372066 ADHFE1Q8IWW8 467 aa14.77□□□□□ -0.04
LDB3-204ENST00000372066 KIAA0319LQ8IZA0 1049 aa14.77□□□□□ -0.04
LDB3-204ENST00000372066 NME8Q8N427 588 aa14.77□□□□□ -0.04
LDB3-204ENST00000372066 WDTC1Q8N5D0 677 aa14.77□□□□□ -0.04
LDB3-204ENST00000372066 SH2D3CQ8N5H7 860 aa14.77□□□□□ -0.04
LDB3-204ENST00000372066 SLC4A11Q8NBS3 891 aa14.77□□□□□ -0.04
LDB3-204ENST00000372066 HPDLQ96IR7 371 aa14.77□□□□□ -0.04
LDB3-204ENST00000372066 CPB2Q96IY4 423 aa14.77□□□□□ -0.04
LDB3-204ENST00000372066 SLITRK1Q96PX8 696 aa14.77□□□□□ -0.04
LDB3-204ENST00000372066 TRAIPQ9BWF2 469 aa14.77□□□□□ -0.04
LDB3-204ENST00000372066 CNOT10Q9H9A5 744 aaKnown RBP14.77□□□□□ -0.04
LDB3-204ENST00000372066 CHST7Q9NS84 486 aa14.77□□□□□ -0.04
LDB3-204ENST00000372066 BARX2Q9UMQ3 279 aaPredicted RBP14.77□□□□□ -0.04
LDB3-204ENST00000372066 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.77□□□□□ -0.04
LDB3-204ENST00000372066 SMIM35A0A1B0GVV1 85 aa14.77□□□□□ -0.05
LDB3-204ENST00000372066 KRT7P08729 469 aa14.77□□□□□ -0.05
LDB3-204ENST00000372066 GABRB2P47870 512 aa14.77□□□□□ -0.05
LDB3-204ENST00000372066 ZNF252P-AS1Q0IIN9 211 aa14.77□□□□□ -0.05
LDB3-204ENST00000372066 MYO1EQ12965 1108 aa14.77□□□□□ -0.05
LDB3-204ENST00000372066 BYSLQ13895 437 aaKnown RBP14.77□□□□□ -0.05
LDB3-204ENST00000372066 CNGA2Q16280 664 aa14.77□□□□□ -0.05
LDB3-204ENST00000372066 HADHQ16836 314 aaKnown RBP14.77□□□□□ -0.05
LDB3-204ENST00000372066 PTPN20Q4JDL3 420 aa14.77□□□□□ -0.05
LDB3-204ENST00000372066 SCARA3Q6AZY7 606 aa14.77□□□□□ -0.05
LDB3-204ENST00000372066 CMTR2Q8IYT2 770 aaKnown RBP14.77□□□□□ -0.05
LDB3-204ENST00000372066 TLCD1Q96CP7 247 aa14.77□□□□□ -0.05
LDB3-204ENST00000372066 CCDC114Q96M63 670 aa14.77□□□□□ -0.05
LDB3-204ENST00000372066 ROPN1BQ9BZX4 212 aaPredicted RBP14.77□□□□□ -0.05
LDB3-204ENST00000372066 EPB41L4BQ9H329 900 aa14.77□□□□□ -0.05
LDB3-204ENST00000372066 SMYD3Q9H7B4 428 aa14.77□□□□□ -0.05
LDB3-204ENST00000372066 ROPN1Q9HAT0 212 aaPredicted RBP14.77□□□□□ -0.05
LDB3-204ENST00000372066 DPP3Q9NY33 737 aa14.77□□□□□ -0.05
LDB3-204ENST00000372066 LRFN2Q9ULH4 789 aa14.77□□□□□ -0.05
LDB3-204ENST00000372066 GINS2Q9Y248 185 aa14.77□□□□□ -0.05
LDB3-204ENST00000372066 COL4A6Q14031 1691 aa14.76□□□□□ -0.05
LDB3-204ENST00000372066 C19orf67A6NJJ6 358 aa14.76□□□□□ -0.05
LDB3-204ENST00000372066 KRT3P12035 628 aa14.76□□□□□ -0.05
LDB3-204ENST00000372066 MDH1P40925 334 aaKnown RBP14.76□□□□□ -0.05
LDB3-204ENST00000372066 PPP2R2AP63151 447 aa14.76□□□□□ -0.05
LDB3-204ENST00000372066 CAMK1Q14012 370 aa14.76□□□□□ -0.05
LDB3-204ENST00000372066 SMAD2Q15796 467 aaKnown RBP14.76□□□□□ -0.05
LDB3-204ENST00000372066 TFDP3Q5H9I0 405 aa14.76□□□□□ -0.05
LDB3-204ENST00000372066 C6orf118Q5T5N4 469 aa14.76□□□□□ -0.05
LDB3-204ENST00000372066 SLC27A1Q6PCB7 646 aa14.76□□□□□ -0.05
LDB3-204ENST00000372066 SPOCD1Q6ZMY3 1216 aa14.76□□□□□ -0.05
LDB3-204ENST00000372066 CRIPAKQ8N1N5 446 aa14.76□□□□□ -0.05
LDB3-204ENST00000372066 OR2W6PQ8NHA6 318 aa14.76□□□□□ -0.05
LDB3-204ENST00000372066 SPPL3Q8TCT6 385 aa14.76□□□□□ -0.05
LDB3-204ENST00000372066 IPO4Q8TEX9 1081 aaKnown RBP14.76□□□□□ -0.05
LDB3-204ENST00000372066 PPP2R3CQ969Q6 453 aa14.76□□□□□ -0.05
LDB3-204ENST00000372066 DNAI2Q9GZS0 605 aa14.76□□□□□ -0.05
LDB3-204ENST00000372066 SDCBP2Q9H190 292 aa14.76□□□□□ -0.05
LDB3-204ENST00000372066 AGAP1Q9UPQ3 857 aa14.76□□□□□ -0.05
LDB3-204ENST00000372066 DRG1Q9Y295 367 aaKnown RBP14.76□□□□□ -0.05
LDB3-204ENST00000372066 NEU2Q9Y3R4 380 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms