RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 GHRP10912 638 aa12.27□□□□□ -0.45
DEPDC1-201ENST00000370966 MTFR1Q15390 333 aa12.27□□□□□ -0.45
DEPDC1-201ENST00000370966 KBTBD12Q3ZCT8 623 aa12.27□□□□□ -0.45
DEPDC1-201ENST00000370966 C6orf10Q5SRN2 563 aa12.27□□□□□ -0.45
DEPDC1-201ENST00000370966 MRNIPQ6NTE8 343 aa12.27□□□□□ -0.45
DEPDC1-201ENST00000370966 DENND5BQ6ZUT9 1274 aa12.27□□□□□ -0.45
DEPDC1-201ENST00000370966 C4orf32Q8N8J7 132 aa12.27□□□□□ -0.45
DEPDC1-201ENST00000370966 GPATCH2LQ9NWQ4 482 aa12.27□□□□□ -0.45
DEPDC1-201ENST00000370966 UBIAD1Q9Y5Z9 338 aa12.27□□□□□ -0.45
DEPDC1-201ENST00000370966 ASTN1O14525 1302 aa12.27□□□□□ -0.45
DEPDC1-201ENST00000370966 KBTBD13C9JR72 458 aa12.27□□□□□ -0.45
DEPDC1-201ENST00000370966 KIF1CO43896 1103 aaKnown RBP12.27□□□□□ -0.45
DEPDC1-201ENST00000370966 MAP3K6O95382 1288 aa12.27□□□□□ -0.45
DEPDC1-201ENST00000370966 ALDH1A1P00352 501 aa12.27□□□□□ -0.45
DEPDC1-201ENST00000370966 VHLP40337 213 aa12.27□□□□□ -0.45
DEPDC1-201ENST00000370966 ZBTB41Q5SVQ8 909 aa12.27□□□□□ -0.45
DEPDC1-201ENST00000370966 MFSD7Q6UXD7 560 aa12.27□□□□□ -0.45
DEPDC1-201ENST00000370966 HOMEZQ8IX15 550 aa12.27□□□□□ -0.45
DEPDC1-201ENST00000370966 KATNAL2Q8IYT4 538 aa12.27□□□□□ -0.45
DEPDC1-201ENST00000370966 EIF2AQ9BY44 585 aaKnown RBP12.27□□□□□ -0.45
DEPDC1-201ENST00000370966 UBE2OQ9C0C9 1292 aaKnown RBP12.27□□□□□ -0.45
DEPDC1-201ENST00000370966 PORCNQ9H237 461 aa12.27□□□□□ -0.45
DEPDC1-201ENST00000370966 RIC8BQ9NVN3 520 aa12.27□□□□□ -0.45
DEPDC1-201ENST00000370966 AFF4Q9UHB7 1163 aaKnown RBP12.27□□□□□ -0.45
DEPDC1-201ENST00000370966 TSPAN16Q9UKR8 245 aa12.27□□□□□ -0.45
DEPDC1-201ENST00000370966 DSEQ9UL01 958 aa12.27□□□□□ -0.45
DEPDC1-201ENST00000370966 EPHB6O15197 1021 aa12.27□□□□□ -0.45
DEPDC1-201ENST00000370966 TBC1D12O60347 775 aa12.27□□□□□ -0.45
DEPDC1-201ENST00000370966 HMGCRP04035 888 aa12.27□□□□□ -0.45
DEPDC1-201ENST00000370966 THP07101 528 aa12.27□□□□□ -0.45
DEPDC1-201ENST00000370966 TARSP26639 723 aaKnown RBP12.27□□□□□ -0.45
DEPDC1-201ENST00000370966 DRG2P55039 364 aaKnown RBP12.27□□□□□ -0.45
DEPDC1-201ENST00000370966 MARSP56192 900 aaKnown RBP12.27□□□□□ -0.45
DEPDC1-201ENST00000370966 HDAC4P56524 1084 aa12.27□□□□□ -0.45
DEPDC1-201ENST00000370966 MFN1Q8IWA4 741 aa12.27□□□□□ -0.45
DEPDC1-201ENST00000370966 MREGQ8N565 214 aa12.27□□□□□ -0.45
DEPDC1-201ENST00000370966 STX18Q9P2W9 335 aaKnown RBP12.27□□□□□ -0.45
DEPDC1-201ENST00000370966 ZBBXA8MT70 800 aa12.26□□□□□ -0.45
DEPDC1-201ENST00000370966 SRP72O76094 671 aaKnown RBP12.26□□□□□ -0.45
DEPDC1-201ENST00000370966 AASDHQ4L235 1098 aaPredicted RBP12.26□□□□□ -0.45
DEPDC1-201ENST00000370966 C10orf120Q5SQS8 335 aa12.26□□□□□ -0.45
DEPDC1-201ENST00000370966 DENND1BQ6P3S1 775 aa12.26□□□□□ -0.45
DEPDC1-201ENST00000370966 ETNPPLQ8TBG4 499 aa12.26□□□□□ -0.45
DEPDC1-201ENST00000370966 SHC3Q92529 594 aa12.26□□□□□ -0.45
DEPDC1-201ENST00000370966 VTA1Q9NP79 307 aa12.26□□□□□ -0.45
DEPDC1-201ENST00000370966 CASS4Q9NQ75 786 aa12.26□□□□□ -0.45
DEPDC1-201ENST00000370966 CAMTA1Q9Y6Y1 1673 aa12.26□□□□□ -0.45
DEPDC1-201ENST00000370966 ANKRD63C9JTQ0 380 aa12.26□□□□□ -0.45
DEPDC1-201ENST00000370966 RAP1GAPP47736 663 aa12.26□□□□□ -0.45
DEPDC1-201ENST00000370966 CRY2Q49AN0 593 aa12.26□□□□□ -0.45
DEPDC1-201ENST00000370966 FAM71AQ8IYT1 594 aa12.26□□□□□ -0.45
DEPDC1-201ENST00000370966 DACT3Q96B18 629 aaPredicted RBP12.26□□□□□ -0.45
DEPDC1-201ENST00000370966 KCTD10Q9H3F6 313 aa12.26□□□□□ -0.45
DEPDC1-201ENST00000370966 RUBCNLQ9H714 662 aa12.26□□□□□ -0.45
DEPDC1-201ENST00000370966 RXFP1Q9HBX9 757 aa12.26□□□□□ -0.45
DEPDC1-201ENST00000370966 MRC1P22897 1456 aa12.26□□□□□ -0.45
DEPDC1-201ENST00000370966 TMEM150BA6NC51 233 aa12.26□□□□□ -0.45
DEPDC1-201ENST00000370966 SLCO1B7G3V0H7 640 aa12.26□□□□□ -0.45
DEPDC1-201ENST00000370966 SUPT3HO75486 399 aa12.26□□□□□ -0.45
DEPDC1-201ENST00000370966 ACADSP16219 412 aa12.26□□□□□ -0.45
DEPDC1-201ENST00000370966 CALB2P22676 271 aa12.26□□□□□ -0.45
DEPDC1-201ENST00000370966 ERFP50548 548 aa12.26□□□□□ -0.45
DEPDC1-201ENST00000370966 NDST1P52848 882 aa12.26□□□□□ -0.45
DEPDC1-201ENST00000370966 MGAT5Q09328 741 aa12.26□□□□□ -0.45
DEPDC1-201ENST00000370966 LRRC38Q5VT99 294 aa12.26□□□□□ -0.45
DEPDC1-201ENST00000370966 RNF180Q86T96 592 aa12.26□□□□□ -0.45
DEPDC1-201ENST00000370966 MUC3BQ9H195 1237 aa12.26□□□□□ -0.45
DEPDC1-201ENST00000370966 ABI2Q9NYB9 513 aaPredicted RBP12.26□□□□□ -0.45
DEPDC1-201ENST00000370966 DRG1Q9Y295 367 aaKnown RBP12.26□□□□□ -0.45
DEPDC1-201ENST00000370966 PRG3Q9Y2Y8 225 aaPredicted RBP12.26□□□□□ -0.45
DEPDC1-201ENST00000370966 ROBO3Q96MS0 1386 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 MAGEB16A2A368 324 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 SRRM3A6NNA2 597 aaPredicted RBP12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 CFAP99D6REC4 459 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 KPNA6O60684 536 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 THRAP10827 490 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 PECAM1P16284 738 aaPredicted RBP12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 CYP2F1P24903 491 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 NFE2Q16621 373 aaPredicted RBP12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 NFIL3Q16649 462 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 ERMARDQ5T6L9 678 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 TDRD10Q5VZ19 366 aaKnown RBP12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 PTRHD1Q6GMV3 140 aaKnown RBP12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 DEFB132Q7Z7B7 95 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 UNC45BQ8IWX7 931 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 USP13Q92995 863 aaPredicted RBP12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 COLEC11Q9BWP8 271 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 PKD2L2Q9NZM6 624 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 BCL9LQ86UU0 1499 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 SOAT2O75908 522 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 HOXC6P09630 235 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 HSPA1AP0DMV8 641 aaKnown RBP12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 HSPA1BP0DMV9 641 aaKnown RBP12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 TM4SF1P30408 202 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 CPA2P48052 419 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 TWF1Q12792 350 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 ZBTB17Q13105 803 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 LY6KQ17RY6 165 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 THEMIS2Q5TEJ8 643 aa12.25□□□□□ -0.45
DEPDC1-201ENST00000370966 SLC27A1Q6PCB7 646 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms