RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 ARL8BQ9NVJ2 186 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 GJA3Q9Y6H8 435 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 FOXO6A8MYZ6 492 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 ZSCAN9O15535 394 aaPredicted RBP13.12□□□□□ -0.31
GPC4-201ENST00000370828 BFSP2Q13515 415 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 ZNF568Q3ZCX4 644 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 AASDHQ4L235 1098 aaPredicted RBP13.12□□□□□ -0.31
GPC4-201ENST00000370828 SEPT12Q8IYM1 358 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 GLIS3Q8NEA6 775 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 ULK4Q96C45 1275 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 UBXN6Q9BZV1 441 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 TBC1D22BQ9NU19 505 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 TRIM43BA6NCK2 446 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 CAMTA2O94983 1202 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 ZSCAN5DPP0CG00 497 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 YWHABP31946 246 aaKnown RBP13.12□□□□□ -0.31
GPC4-201ENST00000370828 PPARGP37231 505 aaPredicted RBP13.12□□□□□ -0.31
GPC4-201ENST00000370828 SLC1A6P48664 564 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 CCR3P51677 355 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 PSMC5P62195 406 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 TRIM28Q13263 835 aaKnown RBP13.12□□□□□ -0.31
GPC4-201ENST00000370828 NCOA4Q13772 614 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 TFDP3Q5H9I0 405 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 ITPRIPL1Q6GPH6 555 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 SDE2Q6IQ49 451 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 TAS2R42Q7RTR8 314 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 OTOAQ7RTW8 1153 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 SNX32Q86XE0 403 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 CCDC33Q8N5R6 958 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 ACTL9Q8TC94 416 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 TCF7L2Q9NQB0 619 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 AGAP1Q9UPQ3 857 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 PBRM1Q86U86 1689 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 UBA6A0AVT1 1052 aaPredicted RBP13.12□□□□□ -0.31
GPC4-201ENST00000370828 MT-CO1P00395 513 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 CDH2P19022 906 aaPredicted RBP13.12□□□□□ -0.31
GPC4-201ENST00000370828 PLIN5Q00G26 463 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 MAP3K10Q02779 954 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 GIT2Q14161 759 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 RBBP7Q16576 425 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 MAPK6Q16659 721 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 OTUD3Q5T2D3 398 aaPredicted RBP13.12□□□□□ -0.31
GPC4-201ENST00000370828 PTPRN2Q92932 1015 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 RMDN3Q96TC7 470 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 MTMR4Q9NYA4 1195 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 COPG2Q9UBF2 871 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 DCDC2Q9UHG0 476 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 PROSCO94903 275 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 ALADP13716 330 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 CPA3P15088 417 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 CDH3P22223 829 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 STIP1P31948 543 aaKnown RBP13.12□□□□□ -0.31
GPC4-201ENST00000370828 CCNFP41002 786 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 MARCKSL1P49006 195 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 RAB27AP51159 221 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 DUOXA2Q1HG44 320 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 SBK1Q52WX2 424 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 DENND5BQ6ZUT9 1274 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 FAM9CQ8IZT9 166 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 OLA1Q9NTK5 396 aaKnown RBP13.12□□□□□ -0.31
GPC4-201ENST00000370828 RSL24D1Q9UHA3 163 aaKnown RBP13.12□□□□□ -0.31
GPC4-201ENST00000370828 RPL26L1Q9UNX3 145 aaKnown RBP13.12□□□□□ -0.31
GPC4-201ENST00000370828 PCDHA3Q9Y5H8 950 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 TET3O43151 1660 aa13.12□□□□□ -0.31
GPC4-201ENST00000370828 GSC2O15499 205 aa13.11□□□□□ -0.31
GPC4-201ENST00000370828 RAD17O75943 681 aa13.11□□□□□ -0.31
GPC4-201ENST00000370828 ME2P23368 584 aa13.11□□□□□ -0.31
GPC4-201ENST00000370828 KHDC1Q4VXA5 237 aaKnown RBP13.11□□□□□ -0.31
GPC4-201ENST00000370828 ULK2Q8IYT8 1036 aa13.11□□□□□ -0.31
GPC4-201ENST00000370828 PHC3Q8NDX5 983 aa13.11□□□□□ -0.31
GPC4-201ENST00000370828 ASAP3Q8TDY4 903 aa13.11□□□□□ -0.31
GPC4-201ENST00000370828 CDCA7Q9BWT1 371 aaPredicted RBP13.11□□□□□ -0.31
GPC4-201ENST00000370828 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.11□□□□□ -0.31
GPC4-201ENST00000370828 THAP1Q9NVV9 213 aa13.11□□□□□ -0.31
GPC4-201ENST00000370828 BAZ2BQ9UIF8 2168 aaKnown RBP13.11□□□□□ -0.31
GPC4-201ENST00000370828 FAM25AB3EWG3 89 aa13.11□□□□□ -0.31
GPC4-201ENST00000370828 FAM25CB3EWG5 89 aa13.11□□□□□ -0.31
GPC4-201ENST00000370828 FAM25GB3EWG6 89 aa13.11□□□□□ -0.31
GPC4-201ENST00000370828 MTMR2Q13614 643 aa13.11□□□□□ -0.31
GPC4-201ENST00000370828 N4BP2L1Q5TBK1 243 aaPredicted RBP13.11□□□□□ -0.31
GPC4-201ENST00000370828 TDRD5Q8NAT2 981 aaKnown RBP13.11□□□□□ -0.31
GPC4-201ENST00000370828 GSTCDQ8NEC7 633 aa13.11□□□□□ -0.31
GPC4-201ENST00000370828 NAT14Q8WUY8 206 aa13.11□□□□□ -0.31
GPC4-201ENST00000370828 CNKSR1Q969H4 720 aa13.11□□□□□ -0.31
GPC4-201ENST00000370828 KCNK4Q9NYG8 393 aa13.11□□□□□ -0.31
GPC4-201ENST00000370828 TAS2R14Q9NYV8 317 aa13.11□□□□□ -0.31
GPC4-201ENST00000370828 SHOC2Q9UQ13 582 aa13.11□□□□□ -0.31
GPC4-201ENST00000370828 SPEF1Q9Y4P9 236 aa13.11□□□□□ -0.31
GPC4-201ENST00000370828 TRPC5OSA6NMA1 111 aa13.11□□□□□ -0.31
GPC4-201ENST00000370828 EDF1O60869 148 aaKnown RBP13.11□□□□□ -0.31
GPC4-201ENST00000370828 CSF1RP07333 972 aa13.11□□□□□ -0.31
GPC4-201ENST00000370828 RASA1P20936 1047 aa13.11□□□□□ -0.31
GPC4-201ENST00000370828 SPOCD1Q6ZMY3 1216 aa13.11□□□□□ -0.31
GPC4-201ENST00000370828 OR8H2Q8N162 312 aa13.11□□□□□ -0.31
GPC4-201ENST00000370828 EXD1Q8NHP7 514 aa13.11□□□□□ -0.31
GPC4-201ENST00000370828 RPS6KL1Q9Y6S9 549 aa13.11□□□□□ -0.31
GPC4-201ENST00000370828 C15orf38-AP3S2A0A0A6YYH1 394 aa13.11□□□□□ -0.31
GPC4-201ENST00000370828 CSPG5O95196 566 aa13.11□□□□□ -0.31
GPC4-201ENST00000370828 AGKQ53H12 422 aa13.11□□□□□ -0.31
GPC4-201ENST00000370828 ATAD3BQ5T9A4 648 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms