RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 ZBED1O96006 694 aa14.49□□□□□ -0.09
SSR4-202ENST00000370085 TUBP50607 506 aa14.49□□□□□ -0.09
SSR4-202ENST00000370085 TRIM14Q14142 442 aa14.49□□□□□ -0.09
SSR4-202ENST00000370085 PKDCCQ504Y2 493 aa14.49□□□□□ -0.09
SSR4-202ENST00000370085 RAB41Q5JT25 222 aa14.49□□□□□ -0.09
SSR4-202ENST00000370085 HECTD3Q5T447 861 aa14.49□□□□□ -0.09
SSR4-202ENST00000370085 CCDC186Q7Z3E2 898 aa14.49□□□□□ -0.09
SSR4-202ENST00000370085 RNF135Q8IUD6 432 aa14.49□□□□□ -0.09
SSR4-202ENST00000370085 CMTM8Q8IZV2 173 aa14.49□□□□□ -0.09
SSR4-202ENST00000370085 MAB21L3Q8N8X9 362 aa14.49□□□□□ -0.09
SSR4-202ENST00000370085 TMEM35BQ8NCS4 154 aa14.49□□□□□ -0.09
SSR4-202ENST00000370085 SLC35F5Q8WV83 523 aa14.49□□□□□ -0.09
SSR4-202ENST00000370085 ELSPBP1Q96BH3 223 aa14.49□□□□□ -0.09
SSR4-202ENST00000370085 ASB16Q96NS5 453 aa14.49□□□□□ -0.09
SSR4-202ENST00000370085 TRIM62Q9BVG3 475 aa14.49□□□□□ -0.09
SSR4-202ENST00000370085 TRIM5Q9C035 493 aa14.49□□□□□ -0.09
SSR4-202ENST00000370085 SYNCQ9H7C4 482 aa14.49□□□□□ -0.09
SSR4-202ENST00000370085 KIF9Q9HAQ2 790 aa14.49□□□□□ -0.09
SSR4-202ENST00000370085 KCNK12Q9HB15 430 aa14.49□□□□□ -0.09
SSR4-202ENST00000370085 TRPV4Q9HBA0 871 aa14.49□□□□□ -0.09
SSR4-202ENST00000370085 CNGB3Q9NQW8 809 aa14.49□□□□□ -0.09
SSR4-202ENST00000370085 CHORDC1Q9UHD1 332 aaPredicted RBP14.49□□□□□ -0.09
SSR4-202ENST00000370085 SORCS3Q9UPU3 1222 aa14.49□□□□□ -0.09
SSR4-202ENST00000370085 OBSL1O75147 1896 aa14.48□□□□□ -0.09
SSR4-202ENST00000370085 NUP210Q8TEM1 1887 aaPredicted RBP14.48□□□□□ -0.09
SSR4-202ENST00000370085 MYO10Q9HD67 2058 aa14.48□□□□□ -0.09
SSR4-202ENST00000370085 ITIH6Q6UXX5 1313 aa14.48□□□□□ -0.09
SSR4-202ENST00000370085 A0A1W2PQJ5 194 aa14.48□□□□□ -0.09
SSR4-202ENST00000370085 ANHXE9PGG2 379 aa14.48□□□□□ -0.09
SSR4-202ENST00000370085 EPHB6O15197 1021 aa14.48□□□□□ -0.09
SSR4-202ENST00000370085 ECI2O75521 394 aa14.48□□□□□ -0.09
SSR4-202ENST00000370085 LSM8O95777 96 aaKnown RBP14.48□□□□□ -0.09
SSR4-202ENST00000370085 PNMA6AP0CW24 399 aaPredicted RBP14.48□□□□□ -0.09
SSR4-202ENST00000370085 RALAP11233 206 aa14.48□□□□□ -0.09
SSR4-202ENST00000370085 HDCP19113 662 aa14.48□□□□□ -0.09
SSR4-202ENST00000370085 GPD2P43304 727 aa14.48□□□□□ -0.09
SSR4-202ENST00000370085 ARID5AQ03989 594 aa14.48□□□□□ -0.09
SSR4-202ENST00000370085 GOLGA8FQ08AF8 430 aa14.48□□□□□ -0.09
SSR4-202ENST00000370085 GOLGA8DPQ0D2H9 430 aa14.48□□□□□ -0.09
SSR4-202ENST00000370085 ADIGQ0VDE8 80 aa14.48□□□□□ -0.09
SSR4-202ENST00000370085 TDGQ13569 410 aa14.48□□□□□ -0.09
SSR4-202ENST00000370085 HTR4Q13639 388 aa14.48□□□□□ -0.09
SSR4-202ENST00000370085 TSR1Q2NL82 804 aaKnown RBP14.48□□□□□ -0.09
SSR4-202ENST00000370085 FAM78AQ5JUQ0 283 aa14.48□□□□□ -0.09
SSR4-202ENST00000370085 SFMBT2Q5VUG0 894 aa14.48□□□□□ -0.09
SSR4-202ENST00000370085 SNX30Q5VWJ9 437 aa14.48□□□□□ -0.09
SSR4-202ENST00000370085 SPECC1LQ69YQ0 1117 aa14.48□□□□□ -0.09
SSR4-202ENST00000370085 TXNDC8Q6A555 127 aa14.48□□□□□ -0.09
SSR4-202ENST00000370085 SARM1Q6SZW1 724 aa14.48□□□□□ -0.09
SSR4-202ENST00000370085 TRIM72Q6ZMU5 477 aa14.48□□□□□ -0.09
SSR4-202ENST00000370085 GPRIN1Q7Z2K8 1008 aa14.48□□□□□ -0.09
SSR4-202ENST00000370085 TMEM150AQ86TG1 271 aa14.48□□□□□ -0.09
SSR4-202ENST00000370085 DDX42Q86XP3 938 aaKnown RBP eCLIP14.48□□□□□ -0.09
SSR4-202ENST00000370085 ARID3BQ8IVW6 561 aaPredicted RBP14.48□□□□□ -0.09
SSR4-202ENST00000370085 YAF2Q8IY57 180 aa14.48□□□□□ -0.09
SSR4-202ENST00000370085 CELF5Q8N6W0 485 aaKnown RBP14.48□□□□□ -0.09
SSR4-202ENST00000370085 IPO4Q8TEX9 1081 aaKnown RBP14.48□□□□□ -0.09
SSR4-202ENST00000370085 DEPDC1BQ8WUY9 529 aa14.48□□□□□ -0.09
SSR4-202ENST00000370085 NECAB3Q96P71 396 aaPredicted RBP14.48□□□□□ -0.09
SSR4-202ENST00000370085 ZSWIM1Q9BR11 485 aa14.48□□□□□ -0.09
SSR4-202ENST00000370085 TDP1Q9NUW8 608 aa14.48□□□□□ -0.09
SSR4-202ENST00000370085 THG1LQ9NWX6 298 aaKnown RBP14.48□□□□□ -0.09
SSR4-202ENST00000370085 OBP2AQ9NY56 170 aa14.48□□□□□ -0.09
SSR4-202ENST00000370085 GMIPQ9P107 970 aa14.48□□□□□ -0.09
SSR4-202ENST00000370085 NAGPAQ9UK23 515 aa14.48□□□□□ -0.09
SSR4-202ENST00000370085 USP3Q9Y6I4 520 aa14.48□□□□□ -0.09
SSR4-202ENST00000370085 ANAPC1Q9H1A4 1944 aa14.48□□□□□ -0.09
SSR4-202ENST00000370085 TADA3O75528 432 aa14.47□□□□□ -0.09
SSR4-202ENST00000370085 CALCAP01258 141 aa14.47□□□□□ -0.09
SSR4-202ENST00000370085 ALADP13716 330 aa14.47□□□□□ -0.09
SSR4-202ENST00000370085 LCP1P13796 627 aa14.47□□□□□ -0.09
SSR4-202ENST00000370085 RGS7P49802 495 aa14.47□□□□□ -0.09
SSR4-202ENST00000370085 CDR2Q01850 454 aa14.47□□□□□ -0.09
SSR4-202ENST00000370085 ZNF268Q14587 947 aaPredicted RBP14.47□□□□□ -0.09
SSR4-202ENST00000370085 ASIC2Q16515 512 aa14.47□□□□□ -0.09
SSR4-202ENST00000370085 STXBP5Q5T5C0 1151 aa14.47□□□□□ -0.09
SSR4-202ENST00000370085 PM20D1Q6GTS8 502 aa14.47□□□□□ -0.09
SSR4-202ENST00000370085 PPP1R2P3Q6NXS1 205 aa14.47□□□□□ -0.09
SSR4-202ENST00000370085 PMF1Q6P1K2 205 aa14.47□□□□□ -0.09
SSR4-202ENST00000370085 DENND1BQ6P3S1 775 aa14.47□□□□□ -0.09
SSR4-202ENST00000370085 PARM1Q6UWI2 310 aa14.47□□□□□ -0.09
SSR4-202ENST00000370085 PASD1Q8IV76 773 aa14.47□□□□□ -0.09
SSR4-202ENST00000370085 UBALD2Q8IYN6 164 aa14.47□□□□□ -0.09
SSR4-202ENST00000370085 SCML4Q8N228 414 aa14.47□□□□□ -0.09
SSR4-202ENST00000370085 EPS8L1Q8TE68 723 aa14.47□□□□□ -0.09
SSR4-202ENST00000370085 IRGQQ8WZA9 623 aa14.47□□□□□ -0.09
SSR4-202ENST00000370085 SLC46A2Q9BY10 475 aa14.47□□□□□ -0.09
SSR4-202ENST00000370085 ACP6Q9NPH0 428 aa14.47□□□□□ -0.09
SSR4-202ENST00000370085 OLA1Q9NTK5 396 aaKnown RBP14.47□□□□□ -0.09
SSR4-202ENST00000370085 CLIC5Q9NZA1 410 aa14.47□□□□□ -0.09
SSR4-202ENST00000370085 LUC7L2Q9Y383 392 aaKnown RBP14.47□□□□□ -0.09
SSR4-202ENST00000370085 NUMBLQ9Y6R0 609 aa14.47□□□□□ -0.09
SSR4-202ENST00000370085 VCANP13611 3396 aa14.46□□□□□ -0.09
SSR4-202ENST00000370085 LRRC53A6NM62 1247 aa14.46□□□□□ -0.09
SSR4-202ENST00000370085 TULP2O00295 520 aa14.46□□□□□ -0.09
SSR4-202ENST00000370085 TLR5O60602 858 aa14.46□□□□□ -0.09
SSR4-202ENST00000370085 ZDHHC11BP0C7U3 371 aa14.46□□□□□ -0.09
SSR4-202ENST00000370085 PSMC3P17980 439 aa14.46□□□□□ -0.09
SSR4-202ENST00000370085 ATP5C1P36542 298 aaKnown RBP14.46□□□□□ -0.09
SSR4-202ENST00000370085 PBX1P40424 430 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms