RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 ABHD10Q9NUJ1 306 aa16.36■□□□□ 0.21
PRPF38B-202ENST00000370022 GDE1Q9NZC3 331 aa16.36■□□□□ 0.21
PRPF38B-202ENST00000370022 IMPACTQ9P2X3 320 aa16.36■□□□□ 0.21
PRPF38B-202ENST00000370022 NR2E1Q9Y466 385 aa16.36■□□□□ 0.21
PRPF38B-202ENST00000370022 UNC80Q8N2C7 3258 aa16.36■□□□□ 0.21
PRPF38B-202ENST00000370022 REV3LO60673 3130 aa16.36■□□□□ 0.21
PRPF38B-202ENST00000370022 C2orf16Q68DN1 1984 aa16.36■□□□□ 0.21
PRPF38B-202ENST00000370022 A0A0C4DFX4 3053 aa16.35■□□□□ 0.21
PRPF38B-202ENST00000370022 A0A1W2PRU2 124 aa16.35■□□□□ 0.21
PRPF38B-202ENST00000370022 SART1O43290 800 aaKnown RBP16.35■□□□□ 0.21
PRPF38B-202ENST00000370022 ZBED1O96006 694 aa16.35■□□□□ 0.21
PRPF38B-202ENST00000370022 PFKLP17858 780 aa16.35■□□□□ 0.21
PRPF38B-202ENST00000370022 CCR2P41597 374 aa16.35■□□□□ 0.21
PRPF38B-202ENST00000370022 RGS7P49802 495 aa16.35■□□□□ 0.21
PRPF38B-202ENST00000370022 ADIGQ0VDE8 80 aa16.35■□□□□ 0.21
PRPF38B-202ENST00000370022 SNX30Q5VWJ9 437 aa16.35■□□□□ 0.21
PRPF38B-202ENST00000370022 HGSNATQ68CP4 663 aa16.35■□□□□ 0.21
PRPF38B-202ENST00000370022 PM20D1Q6GTS8 502 aa16.35■□□□□ 0.21
PRPF38B-202ENST00000370022 GET4Q7L5D6 327 aaPredicted RBP16.35■□□□□ 0.21
PRPF38B-202ENST00000370022 TMEM150AQ86TG1 271 aa16.35■□□□□ 0.21
PRPF38B-202ENST00000370022 VPS36Q86VN1 386 aa16.35■□□□□ 0.21
PRPF38B-202ENST00000370022 GPIHBP1Q8IV16 184 aa16.35■□□□□ 0.21
PRPF38B-202ENST00000370022 C1orf131Q8NDD1 294 aaKnown RBP16.35■□□□□ 0.21
PRPF38B-202ENST00000370022 ITFG1Q8TB96 612 aa16.35■□□□□ 0.21
PRPF38B-202ENST00000370022 SHKBP1Q8TBC3 707 aa16.35■□□□□ 0.21
PRPF38B-202ENST00000370022 IPO4Q8TEX9 1081 aaKnown RBP16.35■□□□□ 0.21
PRPF38B-202ENST00000370022 MRPS31Q92665 395 aaKnown RBP16.35■□□□□ 0.21
PRPF38B-202ENST00000370022 ACSF2Q96CM8 615 aaPredicted RBP16.35■□□□□ 0.21
PRPF38B-202ENST00000370022 PPP1R13BQ96KQ4 1090 aa16.35■□□□□ 0.21
PRPF38B-202ENST00000370022 ASB2Q96Q27 587 aa16.35■□□□□ 0.21
PRPF38B-202ENST00000370022 SYT11Q9BT88 431 aa16.35■□□□□ 0.21
PRPF38B-202ENST00000370022 TLR8Q9NR97 1041 aaKnown RBP16.35■□□□□ 0.21
PRPF38B-202ENST00000370022 PRKAG3Q9UGI9 489 aa16.35■□□□□ 0.21
PRPF38B-202ENST00000370022 CYTH4Q9UIA0 394 aa16.35■□□□□ 0.21
PRPF38B-202ENST00000370022 CDH7Q9ULB5 785 aa16.35■□□□□ 0.21
PRPF38B-202ENST00000370022 SPTBN5Q9NRC6 3674 aaKnown RBP16.35■□□□□ 0.21
PRPF38B-202ENST00000370022 BRWD1Q9NSI6 2320 aa16.35■□□□□ 0.21
PRPF38B-202ENST00000370022 ZNF840PA6NDX5 716 aa16.34■□□□□ 0.21
PRPF38B-202ENST00000370022 MOSPD3O75425 235 aa16.34■□□□□ 0.21
PRPF38B-202ENST00000370022 ZDHHC11BP0C7U3 371 aa16.34■□□□□ 0.21
PRPF38B-202ENST00000370022 TNFAIP3P21580 790 aa16.34■□□□□ 0.21
PRPF38B-202ENST00000370022 MRE11P49959 708 aa16.34■□□□□ 0.21
PRPF38B-202ENST00000370022 NOMO3P69849 1222 aa16.34■□□□□ 0.21
PRPF38B-202ENST00000370022 TDRD12Q587J7 1177 aaKnown RBP16.34■□□□□ 0.21
PRPF38B-202ENST00000370022 MON1AQ86VX9 555 aa16.34■□□□□ 0.21
PRPF38B-202ENST00000370022 ZDHHC17Q8IUH5 632 aa16.34■□□□□ 0.21
PRPF38B-202ENST00000370022 IRGQQ8WZA9 623 aa16.34■□□□□ 0.21
PRPF38B-202ENST00000370022 FGF13Q92913 245 aa16.34■□□□□ 0.21
PRPF38B-202ENST00000370022 TCEAL4Q96EI5 215 aa16.34■□□□□ 0.21
PRPF38B-202ENST00000370022 DENND4AQ7Z401 1863 aa16.34■□□□□ 0.21
PRPF38B-202ENST00000370022 GREB1Q4ZG55 1949 aa16.34■□□□□ 0.21
PRPF38B-202ENST00000370022 GOLGA6L6A8MZA4 724 aa16.34■□□□□ 0.21
PRPF38B-202ENST00000370022 TADA3O75528 432 aa16.34■□□□□ 0.21
PRPF38B-202ENST00000370022 USP17L7P0C7H9 530 aa16.34■□□□□ 0.21
PRPF38B-202ENST00000370022 UNGP13051 313 aaPredicted RBP16.34■□□□□ 0.21
PRPF38B-202ENST00000370022 LCP1P13796 627 aa16.34■□□□□ 0.21
PRPF38B-202ENST00000370022 IL9P15248 144 aa16.34■□□□□ 0.21
PRPF38B-202ENST00000370022 TUBP50607 506 aa16.34■□□□□ 0.21
PRPF38B-202ENST00000370022 KCNQ1P51787 676 aa16.34■□□□□ 0.21
PRPF38B-202ENST00000370022 ADKP55263 362 aaKnown RBP16.34■□□□□ 0.21
PRPF38B-202ENST00000370022 CENPCQ03188 943 aa16.34■□□□□ 0.21
PRPF38B-202ENST00000370022 TEAD2Q15562 447 aa16.34■□□□□ 0.21
PRPF38B-202ENST00000370022 ZNF571Q7Z3V5 609 aaPredicted RBP16.34■□□□□ 0.21
PRPF38B-202ENST00000370022 ERICH1Q86X53 443 aa16.34■□□□□ 0.21
PRPF38B-202ENST00000370022 NPAS3Q8IXF0 933 aa16.34■□□□□ 0.21
PRPF38B-202ENST00000370022 TDRD5Q8NAT2 981 aaKnown RBP16.34■□□□□ 0.21
PRPF38B-202ENST00000370022 CPXM1Q96SM3 734 aa16.34■□□□□ 0.21
PRPF38B-202ENST00000370022 ULBP1Q9BZM6 244 aa16.34■□□□□ 0.21
PRPF38B-202ENST00000370022 TASP1Q9H6P5 420 aa16.34■□□□□ 0.21
PRPF38B-202ENST00000370022 SYNCQ9H7C4 482 aa16.34■□□□□ 0.21
PRPF38B-202ENST00000370022 SEPT11Q9NVA2 429 aaKnown RBP16.34■□□□□ 0.21
PRPF38B-202ENST00000370022 CLIC5Q9NZA1 410 aa16.34■□□□□ 0.21
PRPF38B-202ENST00000370022 XIRP2A4UGR9 3374 aa16.33■□□□□ 0.21
PRPF38B-202ENST00000370022 MYH10P35580 1976 aa16.33■□□□□ 0.2
PRPF38B-202ENST00000370022 E5RJQ4 531 aa16.33■□□□□ 0.2
PRPF38B-202ENST00000370022 SKILP12757 684 aa16.33■□□□□ 0.2
PRPF38B-202ENST00000370022 CEBPBP17676 345 aa16.33■□□□□ 0.2
PRPF38B-202ENST00000370022 GBP2P32456 591 aaPredicted RBP16.33■□□□□ 0.2
PRPF38B-202ENST00000370022 NSFP46459 744 aaKnown RBP16.33■□□□□ 0.2
PRPF38B-202ENST00000370022 CDK17Q00537 523 aa16.33■□□□□ 0.2
PRPF38B-202ENST00000370022 GSE1Q14687 1217 aa16.33■□□□□ 0.2
PRPF38B-202ENST00000370022 CLEC16AQ2KHT3 1053 aa16.33■□□□□ 0.2
PRPF38B-202ENST00000370022 GPR158Q5T848 1215 aa16.33■□□□□ 0.2
PRPF38B-202ENST00000370022 NAA35Q5VZE5 725 aa16.33■□□□□ 0.2
PRPF38B-202ENST00000370022 PLCD3Q8N3E9 789 aa16.33■□□□□ 0.2
PRPF38B-202ENST00000370022 CDK5RAP1Q96SZ6 601 aaKnown RBP16.33■□□□□ 0.2
PRPF38B-202ENST00000370022 PCDHB18PQ96TA0 734 aa16.33■□□□□ 0.2
PRPF38B-202ENST00000370022 TRIM62Q9BVG3 475 aa16.33■□□□□ 0.2
PRPF38B-202ENST00000370022 GMIPQ9P107 970 aa16.33■□□□□ 0.2
PRPF38B-202ENST00000370022 EPS15L1Q9UBC2 864 aa16.33■□□□□ 0.2
PRPF38B-202ENST00000370022 CHORDC1Q9UHD1 332 aaPredicted RBP16.33■□□□□ 0.2
PRPF38B-202ENST00000370022 GABBR2O75899 941 aa16.32■□□□□ 0.2
PRPF38B-202ENST00000370022 LAMP2P13473 410 aa16.32■□□□□ 0.2
PRPF38B-202ENST00000370022 GJA1P17302 382 aa16.32■□□□□ 0.2
PRPF38B-202ENST00000370022 MMP8P22894 467 aa16.32■□□□□ 0.2
PRPF38B-202ENST00000370022 WEE1P30291 646 aa16.32■□□□□ 0.2
PRPF38B-202ENST00000370022 GABRB2P47870 512 aa16.32■□□□□ 0.2
PRPF38B-202ENST00000370022 DAOAP59103 153 aa16.32■□□□□ 0.2
PRPF38B-202ENST00000370022 CYP4F8P98187 520 aa16.32■□□□□ 0.2
PRPF38B-202ENST00000370022 PTPN20Q4JDL3 420 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms