RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 PCYT2Q99447 389 aa12.08□□□□□ -0.48
USF1-201ENST00000368019 SMARCAD1Q9H4L7 1026 aa12.08□□□□□ -0.48
USF1-201ENST00000368019 CHST7Q9NS84 486 aa12.08□□□□□ -0.48
USF1-201ENST00000368019 ANKEF1Q9NU02 776 aa12.08□□□□□ -0.48
USF1-201ENST00000368019 DRG1Q9Y295 367 aaKnown RBP12.08□□□□□ -0.48
USF1-201ENST00000368019 L3MBTL1Q9Y468 752 aa12.08□□□□□ -0.48
USF1-201ENST00000368019 ZNF318Q5VUA4 2279 aa12.07□□□□□ -0.48
USF1-201ENST00000368019 C19orf67A6NJJ6 358 aa12.07□□□□□ -0.48
USF1-201ENST00000368019 RASA4BC9J798 803 aa12.07□□□□□ -0.48
USF1-201ENST00000368019 DNALI1O14645 258 aaPredicted RBP12.07□□□□□ -0.48
USF1-201ENST00000368019 GRM6O15303 877 aa12.07□□□□□ -0.48
USF1-201ENST00000368019 MAFGO15525 162 aa12.07□□□□□ -0.48
USF1-201ENST00000368019 RASA4O43374 803 aa12.07□□□□□ -0.48
USF1-201ENST00000368019 PEX11AO75192 247 aa12.07□□□□□ -0.48
USF1-201ENST00000368019 IL1BP01584 269 aa12.07□□□□□ -0.48
USF1-201ENST00000368019 CYP1A1P04798 512 aaPredicted RBP12.07□□□□□ -0.48
USF1-201ENST00000368019 ADCY8P40145 1251 aa12.07□□□□□ -0.48
USF1-201ENST00000368019 RARRES1P49788 294 aa12.07□□□□□ -0.48
USF1-201ENST00000368019 MCL1Q07820 350 aa12.07□□□□□ -0.48
USF1-201ENST00000368019 MTMR1Q13613 665 aa12.07□□□□□ -0.48
USF1-201ENST00000368019 C11orf91Q3C1V1 193 aa12.07□□□□□ -0.48
USF1-201ENST00000368019 LIN9Q5TKA1 542 aa12.07□□□□□ -0.48
USF1-201ENST00000368019 LRRC38Q5VT99 294 aa12.07□□□□□ -0.48
USF1-201ENST00000368019 IZUMO3Q5VZ72 239 aa12.07□□□□□ -0.48
USF1-201ENST00000368019 CAPRIN2Q6IMN6 1127 aaKnown RBP12.07□□□□□ -0.48
USF1-201ENST00000368019 ZNF746Q6NUN9 644 aaPredicted RBP12.07□□□□□ -0.48
USF1-201ENST00000368019 MIER3Q7Z3K6 550 aa12.07□□□□□ -0.48
USF1-201ENST00000368019 APBB1IPQ7Z5R6 666 aaPredicted RBP12.07□□□□□ -0.48
USF1-201ENST00000368019 RSPH3Q86UC2 560 aa12.07□□□□□ -0.48
USF1-201ENST00000368019 RTN4RL1Q86UN2 441 aaPredicted RBP12.07□□□□□ -0.48
USF1-201ENST00000368019 SLC47A2Q86VL8 602 aa12.07□□□□□ -0.48
USF1-201ENST00000368019 ERICH1Q86X53 443 aa12.07□□□□□ -0.48
USF1-201ENST00000368019 VSIG1Q86XK7 387 aa12.07□□□□□ -0.48
USF1-201ENST00000368019 MAP4K3Q8IVH8 894 aa12.07□□□□□ -0.48
USF1-201ENST00000368019 KSR1Q8IVT5 923 aa12.07□□□□□ -0.48
USF1-201ENST00000368019 C4orf19Q8IY42 314 aa12.07□□□□□ -0.48
USF1-201ENST00000368019 PPM1KQ8N3J5 372 aa12.07□□□□□ -0.48
USF1-201ENST00000368019 RDM1Q8NG50 284 aa12.07□□□□□ -0.48
USF1-201ENST00000368019 PLEKHO2Q8TD55 490 aa12.07□□□□□ -0.48
USF1-201ENST00000368019 PARD3BQ8TEW8 1205 aa12.07□□□□□ -0.48
USF1-201ENST00000368019 C1orf54Q8WWF1 131 aa12.07□□□□□ -0.48
USF1-201ENST00000368019 DNAJB3Q8WWF6 145 aa12.07□□□□□ -0.48
USF1-201ENST00000368019 SPIRE2Q8WWL2 714 aa12.07□□□□□ -0.48
USF1-201ENST00000368019 LINC01599Q8WXQ3 324 aa12.07□□□□□ -0.48
USF1-201ENST00000368019 ALKBH8Q96BT7 664 aaKnown RBP12.07□□□□□ -0.48
USF1-201ENST00000368019 LRRC37BQ96QE4 947 aa12.07□□□□□ -0.48
USF1-201ENST00000368019 CBWD1Q9BRT8 395 aa12.07□□□□□ -0.48
USF1-201ENST00000368019 FRMD8P1Q9BZ68 369 aaPredicted RBP12.07□□□□□ -0.48
USF1-201ENST00000368019 LMAN2LQ9H0V9 348 aa12.07□□□□□ -0.48
USF1-201ENST00000368019 IKZF4Q9H2S9 585 aa12.07□□□□□ -0.48
USF1-201ENST00000368019 AGO3Q9H9G7 860 aaKnown RBP12.07□□□□□ -0.48
USF1-201ENST00000368019 ETNK1Q9HBU6 452 aa12.07□□□□□ -0.48
USF1-201ENST00000368019 MRPL47Q9HD33 250 aaKnown RBP12.07□□□□□ -0.48
USF1-201ENST00000368019 WRAP73Q9P2S5 460 aaPredicted RBP12.07□□□□□ -0.48
USF1-201ENST00000368019 KCNG1Q9UIX4 513 aa12.07□□□□□ -0.48
USF1-201ENST00000368019 ANAPC7Q9UJX3 599 aa12.07□□□□□ -0.48
USF1-201ENST00000368019 SHOC2Q9UQ13 582 aa12.07□□□□□ -0.48
USF1-201ENST00000368019 HCN4Q9Y3Q4 1203 aa12.07□□□□□ -0.48
USF1-201ENST00000368019 CDY2AQ9Y6F7 541 aa12.07□□□□□ -0.48
USF1-201ENST00000368019 SQORQ9Y6N5 450 aa12.07□□□□□ -0.48
USF1-201ENST00000368019 SCINQ9Y6U3 715 aa12.07□□□□□ -0.48
USF1-201ENST00000368019 WDFY4Q6ZS81 3184 aa12.07□□□□□ -0.48
USF1-201ENST00000368019 MYH9P35579 1960 aaKnown RBP12.07□□□□□ -0.48
USF1-201ENST00000368019 FNDC1Q4ZHG4 1894 aaPredicted RBP12.06□□□□□ -0.48
USF1-201ENST00000368019 PRR33A8MZF0 331 aa12.06□□□□□ -0.48
USF1-201ENST00000368019 H0YCG3 227 aa12.06□□□□□ -0.48
USF1-201ENST00000368019 IPO5O00410 1097 aaKnown RBP12.06□□□□□ -0.48
USF1-201ENST00000368019 DGKIO75912 1065 aa12.06□□□□□ -0.48
USF1-201ENST00000368019 NEBLO76041 1014 aa12.06□□□□□ -0.48
USF1-201ENST00000368019 ZWINTO95229 277 aa12.06□□□□□ -0.48
USF1-201ENST00000368019 ADRB2P07550 413 aa12.06□□□□□ -0.48
USF1-201ENST00000368019 INSRRP14616 1297 aa12.06□□□□□ -0.48
USF1-201ENST00000368019 CREB1P16220 341 aa12.06□□□□□ -0.48
USF1-201ENST00000368019 ATP6V1C1P21283 382 aa12.06□□□□□ -0.48
USF1-201ENST00000368019 GARTP22102 1010 aa12.06□□□□□ -0.48
USF1-201ENST00000368019 PAX7P23759 505 aa12.06□□□□□ -0.48
USF1-201ENST00000368019 MARK3P27448 753 aa12.06□□□□□ -0.48
USF1-201ENST00000368019 PTPN4P29074 926 aa12.06□□□□□ -0.48
USF1-201ENST00000368019 FOXN2P32314 431 aa12.06□□□□□ -0.48
USF1-201ENST00000368019 CTNNB1P35222 781 aa12.06□□□□□ -0.48
USF1-201ENST00000368019 MAGEA4P43358 317 aa12.06□□□□□ -0.48
USF1-201ENST00000368019 WDR4P57081 412 aaKnown RBP12.06□□□□□ -0.48
USF1-201ENST00000368019 MRPS6P82932 125 aaKnown RBP12.06□□□□□ -0.48
USF1-201ENST00000368019 ZP2Q05996 745 aa12.06□□□□□ -0.48
USF1-201ENST00000368019 CBLBQ13191 982 aa12.06□□□□□ -0.48
USF1-201ENST00000368019 CAMK1Q14012 370 aa12.06□□□□□ -0.48
USF1-201ENST00000368019 MORF4L2Q15014 288 aa12.06□□□□□ -0.48
USF1-201ENST00000368019 TAF11Q15544 211 aa12.06□□□□□ -0.48
USF1-201ENST00000368019 TSNAXIP1Q2TAA8 658 aa12.06□□□□□ -0.48
USF1-201ENST00000368019 FAM91A1Q658Y4 838 aa12.06□□□□□ -0.48
USF1-201ENST00000368019 TSHZ1Q6ZSZ6 1077 aa12.06□□□□□ -0.48
USF1-201ENST00000368019 MGARPQ8TDB4 240 aa12.06□□□□□ -0.48
USF1-201ENST00000368019 C10orf82Q8WW14 230 aa12.06□□□□□ -0.48
USF1-201ENST00000368019 KAT5Q92993 513 aa12.06□□□□□ -0.48
USF1-201ENST00000368019 UTP4Q969X6 686 aaKnown RBP12.06□□□□□ -0.48
USF1-201ENST00000368019 ZBTB10Q96DT7 871 aa12.06□□□□□ -0.48
USF1-201ENST00000368019 SAAL1Q96ER3 474 aa12.06□□□□□ -0.48
USF1-201ENST00000368019 RBM41Q96IZ5 413 aaKnown RBP12.06□□□□□ -0.48
USF1-201ENST00000368019 UIMC1Q96RL1 719 aa12.06□□□□□ -0.48
USF1-201ENST00000368019 C11orf84Q9BUA3 381 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms