RNA–Protein interactions for RNA: ENST00000367178.7

SCAF8-201, Transcript of SR-related CTD associated factor 8, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCAF8, Length 5,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-201ENST00000367178 ERFP50548 548 aa17.11■□□□□ 0.33
SCAF8-201ENST00000367178 RARS2Q5T160 578 aaKnown RBP17.11■□□□□ 0.33
SCAF8-201ENST00000367178 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.11■□□□□ 0.33
SCAF8-201ENST00000367178 TMA16Q96EY4 203 aaKnown RBP17.11■□□□□ 0.33
SCAF8-201ENST00000367178 TEX12Q9BXU0 123 aa17.11■□□□□ 0.33
SCAF8-201ENST00000367178 PKD2L2Q9NZM6 624 aa17.11■□□□□ 0.33
SCAF8-201ENST00000367178 AURKCQ9UQB9 309 aa17.11■□□□□ 0.33
SCAF8-201ENST00000367178 LRRIQ3A6PVS8 624 aaPredicted RBP17.11■□□□□ 0.33
SCAF8-201ENST00000367178 LACTBL1A8MY62 500 aa17.11■□□□□ 0.33
SCAF8-201ENST00000367178 PIK3CDO00329 1044 aa17.11■□□□□ 0.33
SCAF8-201ENST00000367178 KLHL2O95198 593 aa17.11■□□□□ 0.33
SCAF8-201ENST00000367178 SLURP2P0DP57 97 aa17.11■□□□□ 0.33
SCAF8-201ENST00000367178 AXLP30530 894 aa17.11■□□□□ 0.33
SCAF8-201ENST00000367178 DEFB128Q7Z7B8 93 aa17.11■□□□□ 0.33
SCAF8-201ENST00000367178 SNX5Q9Y5X3 404 aa17.11■□□□□ 0.33
SCAF8-201ENST00000367178 FSCN1Q16658 493 aaKnown RBP17.1■□□□□ 0.33
SCAF8-201ENST00000367178 MDM1Q8TC05 714 aa17.1■□□□□ 0.33
SCAF8-201ENST00000367178 PORCNQ9H237 461 aa17.1■□□□□ 0.33
SCAF8-201ENST00000367178 MRGBPQ9NV56 204 aa17.1■□□□□ 0.33
SCAF8-201ENST00000367178 ATP11BQ9Y2G3 1177 aa17.1■□□□□ 0.33
SCAF8-201ENST00000367178 CAMTA1Q9Y6Y1 1673 aa17.1■□□□□ 0.33
SCAF8-201ENST00000367178 ARHGAP10A1A4S6 786 aa17.1■□□□□ 0.33
SCAF8-201ENST00000367178 ANKRD63C9JTQ0 380 aa17.1■□□□□ 0.33
SCAF8-201ENST00000367178 OXCT1P55809 520 aa17.1■□□□□ 0.33
SCAF8-201ENST00000367178 ICA1LQ8NDH6 482 aa17.1■□□□□ 0.33
SCAF8-201ENST00000367178 LRRC40Q9H9A6 602 aa17.1■□□□□ 0.33
SCAF8-201ENST00000367178 CDYLQ9Y232 598 aa17.1■□□□□ 0.33
SCAF8-201ENST00000367178 CDH8P55286 799 aa17.1■□□□□ 0.33
SCAF8-201ENST00000367178 DNAJC3Q13217 504 aa17.1■□□□□ 0.33
SCAF8-201ENST00000367178 ZNF268Q14587 947 aaPredicted RBP17.1■□□□□ 0.33
SCAF8-201ENST00000367178 NFIL3Q16649 462 aa17.1■□□□□ 0.33
SCAF8-201ENST00000367178 SDE2Q6IQ49 451 aa17.1■□□□□ 0.33
SCAF8-201ENST00000367178 TRPM8Q7Z2W7 1104 aa17.1■□□□□ 0.33
SCAF8-201ENST00000367178 NT5DC4Q86YG4 428 aa17.1■□□□□ 0.33
SCAF8-201ENST00000367178 RNF168Q8IYW5 571 aaPredicted RBP17.1■□□□□ 0.33
SCAF8-201ENST00000367178 EPS8L3Q8TE67 593 aaKnown RBP17.1■□□□□ 0.33
SCAF8-201ENST00000367178 VCPIP1Q96JH7 1222 aa17.1■□□□□ 0.33
SCAF8-201ENST00000367178 HEATR9A2RTY3 570 aa17.1■□□□□ 0.33
SCAF8-201ENST00000367178 TBC1D12O60347 775 aa17.1■□□□□ 0.33
SCAF8-201ENST00000367178 RRM2BQ7LG56 351 aa17.1■□□□□ 0.33
SCAF8-201ENST00000367178 RFWD2Q8NHY2 731 aa17.1■□□□□ 0.33
SCAF8-201ENST00000367178 FAM111AQ96PZ2 611 aa17.1■□□□□ 0.33
SCAF8-201ENST00000367178 FHDC1Q9C0D6 1143 aaPredicted RBP17.1■□□□□ 0.33
SCAF8-201ENST00000367178 CNTNAP2Q9UHC6 1331 aa17.09■□□□□ 0.33
SCAF8-201ENST00000367178 DDX3XO00571 662 aaKnown RBP eCLIP17.09■□□□□ 0.335e-9■■■■□ 25.7
SCAF8-201ENST00000367178 CRY2Q49AN0 593 aa17.09■□□□□ 0.33
SCAF8-201ENST00000367178 ARID3BQ8IVW6 561 aaPredicted RBP17.09■□□□□ 0.33
SCAF8-201ENST00000367178 AGGF1Q8N302 714 aaeCLIP17.09■□□□□ 0.33
SCAF8-201ENST00000367178 SNX31Q8N9S9 440 aa17.09■□□□□ 0.33
SCAF8-201ENST00000367178 PCYOX1LQ8NBM8 494 aa17.09■□□□□ 0.33
SCAF8-201ENST00000367178 APOL2Q9BQE5 337 aa17.09■□□□□ 0.33
SCAF8-201ENST00000367178 PLA2G4AP47712 749 aa17.09■□□□□ 0.33
SCAF8-201ENST00000367178 CBWD6Q4V339 395 aa17.09■□□□□ 0.33
SCAF8-201ENST00000367178 CBWD3Q5JTY5 395 aa17.09■□□□□ 0.33
SCAF8-201ENST00000367178 CBWD5Q5RIA9 395 aa17.09■□□□□ 0.33
SCAF8-201ENST00000367178 ANKS3Q6ZW76 656 aa17.09■□□□□ 0.33
SCAF8-201ENST00000367178 KCNK16Q96T55 309 aa17.09■□□□□ 0.33
SCAF8-201ENST00000367178 KCTD10Q9H3F6 313 aa17.09■□□□□ 0.33
SCAF8-201ENST00000367178 YY1AP1Q9H869 796 aa17.09■□□□□ 0.33
SCAF8-201ENST00000367178 TISP43B9A030 160 aa17.09■□□□□ 0.33
SCAF8-201ENST00000367178 APOA4P06727 396 aa17.09■□□□□ 0.33
SCAF8-201ENST00000367178 PDHA1P08559 390 aa17.09■□□□□ 0.33
SCAF8-201ENST00000367178 TTLL9Q3SXZ7 439 aa17.09■□□□□ 0.33
SCAF8-201ENST00000367178 IFNEQ86WN2 208 aa17.09■□□□□ 0.33
SCAF8-201ENST00000367178 ENTPD7Q9NQZ7 604 aa17.09■□□□□ 0.33
SCAF8-201ENST00000367178 SLC4A7Q9Y6M7 1214 aa17.09■□□□□ 0.33
SCAF8-201ENST00000367178 FAM107AO95990 144 aa17.09■□□□□ 0.33
SCAF8-201ENST00000367178 CCDC15Q0P6D6 951 aa17.09■□□□□ 0.33
SCAF8-201ENST00000367178 TMC7Q7Z402 723 aa17.09■□□□□ 0.33
SCAF8-201ENST00000367178 NUP93Q8N1F7 819 aa17.09■□□□□ 0.33
SCAF8-201ENST00000367178 EDEM1Q92611 657 aa17.09■□□□□ 0.33
SCAF8-201ENST00000367178 CMTM5Q96DZ9 223 aa17.09■□□□□ 0.33
SCAF8-201ENST00000367178 TBCBQ99426 244 aa17.09■□□□□ 0.33
SCAF8-201ENST00000367178 WDR18Q9BV38 432 aa17.09■□□□□ 0.33
SCAF8-201ENST00000367178 CCDC90BQ9GZT6 254 aa17.09■□□□□ 0.33
SCAF8-201ENST00000367178 CDC42EP4Q9H3Q1 356 aaKnown RBP17.09■□□□□ 0.33
SCAF8-201ENST00000367178 TRMT6Q9UJA5 497 aaKnown RBP17.09■□□□□ 0.33
SCAF8-201ENST00000367178 UBIAD1Q9Y5Z9 338 aa17.09■□□□□ 0.33
SCAF8-201ENST00000367178 KIF1AQ12756 1690 aa17.09■□□□□ 0.33
SCAF8-201ENST00000367178 ADGRA2Q96PE1 1338 aa17.08■□□□□ 0.33
SCAF8-201ENST00000367178 HOXC6P09630 235 aa17.08■□□□□ 0.33
SCAF8-201ENST00000367178 CYP2F1P24903 491 aa17.08■□□□□ 0.33
SCAF8-201ENST00000367178 PTPN7P35236 360 aa17.08■□□□□ 0.33
SCAF8-201ENST00000367178 INPP5AQ14642 412 aa17.08■□□□□ 0.33
SCAF8-201ENST00000367178 KLC4Q9NSK0 619 aa17.08■□□□□ 0.33
SCAF8-201ENST00000367178 CYP3A7-CYP3A51PA0A087WV96 503 aa17.08■□□□□ 0.32
SCAF8-201ENST00000367178 AIM2O14862 343 aa17.08■□□□□ 0.32
SCAF8-201ENST00000367178 CYP3A7P24462 503 aa17.08■□□□□ 0.32
SCAF8-201ENST00000367178 ADIGQ0VDE8 80 aa17.08■□□□□ 0.32
SCAF8-201ENST00000367178 FAM237AA0A1B0GTK4 181 aa17.08■□□□□ 0.32
SCAF8-201ENST00000367178 TIMM44O43615 452 aa17.08■□□□□ 0.32
SCAF8-201ENST00000367178 PQBP1O60828 265 aaKnown RBP17.08■□□□□ 0.32
SCAF8-201ENST00000367178 NPM3O75607 178 aaKnown RBP17.08■□□□□ 0.32
SCAF8-201ENST00000367178 SOAT2O75908 522 aa17.08■□□□□ 0.32
SCAF8-201ENST00000367178 PAEPP09466 180 aa17.08■□□□□ 0.32
SCAF8-201ENST00000367178 YWHAZP63104 245 aaKnown RBP17.08■□□□□ 0.32
SCAF8-201ENST00000367178 DDI1Q8WTU0 396 aa17.08■□□□□ 0.32
SCAF8-201ENST00000367178 TEKT4Q8WW24 435 aa17.08■□□□□ 0.32
SCAF8-201ENST00000367178 TINF2Q9BSI4 451 aa17.08■□□□□ 0.32
SCAF8-201ENST00000367178 SLC7A5P2Q9GIP4 190 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms