RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 ADORA2AP29274 412 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 MRPS25P82663 173 aaKnown RBP11.33□□□□□ -0.6
CLIP1-203ENST00000361654 ALDH6A1Q02252 535 aaKnown RBP11.33□□□□□ -0.6
CLIP1-203ENST00000361654 GSTA3Q16772 222 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 SYCP2LQ5T4T6 812 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 SNX30Q5VWJ9 437 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 ZNF410Q86VK4 478 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 IFNEQ86WN2 208 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 C1orf131Q8NDD1 294 aaKnown RBP11.33□□□□□ -0.6
CLIP1-203ENST00000361654 RUBCNQ92622 972 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 FDXACB1Q9BRP7 624 aaPredicted RBP11.33□□□□□ -0.6
CLIP1-203ENST00000361654 PRRG3Q9BZD7 231 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 KIAA1683Q9H0B3 1180 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 ZCCHC11Q5TAX3 1644 aaKnown RBP11.33□□□□□ -0.6
CLIP1-203ENST00000361654 RRM2P31350 389 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 CTNNB1P35222 781 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 MAP3K7CLP57077 242 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 MRPS15P82914 257 aaKnown RBP11.33□□□□□ -0.6
CLIP1-203ENST00000361654 BST2Q10589 180 aaKnown RBP11.33□□□□□ -0.6
CLIP1-203ENST00000361654 PTK7Q13308 1070 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 NAB2Q15742 525 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 NBPF9Q3BBW0 867 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 NOL9Q5SY16 702 aaKnown RBP11.33□□□□□ -0.6
CLIP1-203ENST00000361654 P3H2Q8IVL5 708 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 DNAJB3Q8WWF6 145 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 CHMP2BQ9UQN3 213 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 CRYL1Q9Y2S2 319 aa11.33□□□□□ -0.6
CLIP1-203ENST00000361654 NCAM2O15394 837 aa11.32□□□□□ -0.6
CLIP1-203ENST00000361654 CARSP49589 748 aaKnown RBP11.32□□□□□ -0.6
CLIP1-203ENST00000361654 CSTF3Q12996 717 aaKnown RBP11.32□□□□□ -0.6
CLIP1-203ENST00000361654 SRLQ86TD4 932 aa11.32□□□□□ -0.6
CLIP1-203ENST00000361654 IGDCC4Q8TDY8 1250 aa11.32□□□□□ -0.6
CLIP1-203ENST00000361654 OMDQ99983 421 aa11.32□□□□□ -0.6
CLIP1-203ENST00000361654 ECSITQ9BQ95 431 aa11.32□□□□□ -0.6
CLIP1-203ENST00000361654 NAT9Q9BTE0 207 aa11.32□□□□□ -0.6
CLIP1-203ENST00000361654 PAPOLBQ9NRJ5 636 aaKnown RBP11.32□□□□□ -0.6
CLIP1-203ENST00000361654 DDX43Q9NXZ2 648 aaKnown RBP11.32□□□□□ -0.6
CLIP1-203ENST00000361654 KANSL1LA0AUZ9 987 aa11.32□□□□□ -0.6
CLIP1-203ENST00000361654 PDE2AO00408 941 aaPredicted RBP11.32□□□□□ -0.6
CLIP1-203ENST00000361654 INSRRP14616 1297 aa11.32□□□□□ -0.6
CLIP1-203ENST00000361654 CYP2A7P20853 494 aa11.32□□□□□ -0.6
CLIP1-203ENST00000361654 TBX4P57082 545 aa11.32□□□□□ -0.6
CLIP1-203ENST00000361654 PPIL6Q8IXY8 311 aa11.32□□□□□ -0.6
CLIP1-203ENST00000361654 CDK20Q8IZL9 346 aa11.32□□□□□ -0.6
CLIP1-203ENST00000361654 CDCA5Q96FF9 252 aa11.32□□□□□ -0.6
CLIP1-203ENST00000361654 PPP1R36Q96LQ0 422 aa11.32□□□□□ -0.6
CLIP1-203ENST00000361654 TBC1D13Q9NVG8 400 aa11.32□□□□□ -0.6
CLIP1-203ENST00000361654 SCN3BQ9NY72 215 aa11.32□□□□□ -0.6
CLIP1-203ENST00000361654 GMNCA6NCL1 334 aa11.32□□□□□ -0.6
CLIP1-203ENST00000361654 LRRC14BA6NHZ5 514 aa11.32□□□□□ -0.6
CLIP1-203ENST00000361654 CYTH3O43739 400 aa11.32□□□□□ -0.6
CLIP1-203ENST00000361654 SERPINF2P08697 491 aa11.32□□□□□ -0.6
CLIP1-203ENST00000361654 ATP6V1C1P21283 382 aa11.32□□□□□ -0.6
CLIP1-203ENST00000361654 PPP2R1BP30154 601 aa11.32□□□□□ -0.6
CLIP1-203ENST00000361654 NEK2P51955 445 aa11.32□□□□□ -0.6
CLIP1-203ENST00000361654 YWHAZP63104 245 aaKnown RBP11.32□□□□□ -0.6
CLIP1-203ENST00000361654 ACVR2BQ13705 512 aa11.32□□□□□ -0.6
CLIP1-203ENST00000361654 DNAL1Q4LDG9 190 aa11.32□□□□□ -0.6
CLIP1-203ENST00000361654 SLC27A1Q6PCB7 646 aa11.32□□□□□ -0.6
CLIP1-203ENST00000361654 SHC4Q6S5L8 630 aa11.32□□□□□ -0.6
CLIP1-203ENST00000361654 WDR49Q8IV35 697 aa11.32□□□□□ -0.6
CLIP1-203ENST00000361654 TMA16Q96EY4 203 aaKnown RBP11.32□□□□□ -0.6
CLIP1-203ENST00000361654 EXO5Q9H790 373 aa11.32□□□□□ -0.6
CLIP1-203ENST00000361654 H0Y3Z8 333 aa11.32□□□□□ -0.6
CLIP1-203ENST00000361654 GOLGA8RI6L899 631 aa11.32□□□□□ -0.6
CLIP1-203ENST00000361654 AGTP01019 485 aa11.32□□□□□ -0.6
CLIP1-203ENST00000361654 ZNF286BP0CG31 522 aa11.32□□□□□ -0.6
CLIP1-203ENST00000361654 PEX19P40855 299 aa11.32□□□□□ -0.6
CLIP1-203ENST00000361654 ALDH18A1P54886 795 aaKnown RBP11.32□□□□□ -0.6
CLIP1-203ENST00000361654 BTKQ06187 659 aa11.32□□□□□ -0.6
CLIP1-203ENST00000361654 KBTBD12Q3ZCT8 623 aa11.32□□□□□ -0.6
CLIP1-203ENST00000361654 DTX3LQ8TDB6 740 aa11.32□□□□□ -0.6
CLIP1-203ENST00000361654 SERPINB11Q96P15 392 aa11.32□□□□□ -0.6
CLIP1-203ENST00000361654 HPS4Q9NQG7 708 aa11.32□□□□□ -0.6
CLIP1-203ENST00000361654 POLLQ9UGP5 575 aa11.32□□□□□ -0.6
CLIP1-203ENST00000361654 AMACRQ9UHK6 382 aa11.32□□□□□ -0.6
CLIP1-203ENST00000361654 RAD54BQ9Y620 910 aa11.32□□□□□ -0.6
CLIP1-203ENST00000361654 CNTNAP2Q9UHC6 1331 aa11.32□□□□□ -0.6
CLIP1-203ENST00000361654 PPM1AP35813 382 aa11.31□□□□□ -0.6
CLIP1-203ENST00000361654 NDUFV1P49821 464 aa11.31□□□□□ -0.6
CLIP1-203ENST00000361654 UMODL1Q5DID0 1318 aa11.31□□□□□ -0.6
CLIP1-203ENST00000361654 DENND1BQ6P3S1 775 aa11.31□□□□□ -0.6
CLIP1-203ENST00000361654 POTEAQ6S8J7 498 aa11.31□□□□□ -0.6
CLIP1-203ENST00000361654 CASP10Q92851 521 aa11.31□□□□□ -0.6
CLIP1-203ENST00000361654 DTNBP1Q96EV8 351 aa11.31□□□□□ -0.6
CLIP1-203ENST00000361654 WNK4Q96J92 1243 aa11.31□□□□□ -0.6
CLIP1-203ENST00000361654 PI4K2AQ9BTU6 479 aa11.31□□□□□ -0.6
CLIP1-203ENST00000361654 MTMR12Q9C0I1 747 aa11.31□□□□□ -0.6
CLIP1-203ENST00000361654 ELOVL4Q9GZR5 314 aa11.31□□□□□ -0.6
CLIP1-203ENST00000361654 SAE1Q9UBE0 346 aaPredicted RBP11.31□□□□□ -0.6
CLIP1-203ENST00000361654 GNG14A0A1W2PPG7 69 aa11.31□□□□□ -0.6
CLIP1-203ENST00000361654 AKAP10O43572 662 aa11.31□□□□□ -0.6
CLIP1-203ENST00000361654 CHGBP05060 677 aa11.31□□□□□ -0.6
CLIP1-203ENST00000361654 EIF2S1P05198 315 aaKnown RBP11.31□□□□□ -0.6
CLIP1-203ENST00000361654 ENO3P13929 434 aaPredicted RBP11.31□□□□□ -0.6
CLIP1-203ENST00000361654 EXOSC10Q01780 885 aaKnown RBP11.31□□□□□ -0.6
CLIP1-203ENST00000361654 ACOX1Q15067 660 aa11.31□□□□□ -0.6
CLIP1-203ENST00000361654 RGMBQ6NW40 437 aa11.31□□□□□ -0.6
CLIP1-203ENST00000361654 CPB2Q96IY4 423 aa11.31□□□□□ -0.6
CLIP1-203ENST00000361654 ATP13A1Q9HD20 1204 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms