RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 LINC01565O15544 149 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 NRDCO43847 1150 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 RFPL2O75678 378 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 RTN3O95197 1032 aaPredicted RBP13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 ERBB2P04626 1255 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 KCNQ1P51787 676 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 TKTL1P51854 596 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 USP46P62068 366 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 MTMR3Q13615 1198 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 VEPH1Q14D04 833 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 C10orf76Q5T2E6 689 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 MMS22LQ6ZRQ5 1243 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 ITIH5Q86UX2 942 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 MSANTD4Q8NCY6 345 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 CMASQ8NFW8 434 aaPredicted RBP13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 NECAB3Q96P71 396 aaPredicted RBP13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 PRKD2Q9BZL6 878 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 MIS12Q9H081 205 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 FBXO44Q9H4M3 255 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 CNGB3Q9NQW8 809 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 ADAM22Q9P0K1 906 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 TJP2Q9UDY2 1190 aa13.06□□□□□ -0.32
NIF3L1-201ENST00000359683 BRWD1Q9NSI6 2320 aa13.05□□□□□ -0.32
NIF3L1-201ENST00000359683 CCDC195A0A1B0GUA6 201 aa13.05□□□□□ -0.32
NIF3L1-201ENST00000359683 CCL16O15467 120 aa13.05□□□□□ -0.32
NIF3L1-201ENST00000359683 PAPSS1O43252 624 aaPredicted RBP13.05□□□□□ -0.32
NIF3L1-201ENST00000359683 CALB1P05937 261 aa13.05□□□□□ -0.32
NIF3L1-201ENST00000359683 LCP1P13796 627 aa13.05□□□□□ -0.32
NIF3L1-201ENST00000359683 ADIGQ0VDE8 80 aa13.05□□□□□ -0.32
NIF3L1-201ENST00000359683 ZNF268Q14587 947 aaPredicted RBP13.05□□□□□ -0.32
NIF3L1-201ENST00000359683 SPA17Q15506 151 aa13.05□□□□□ -0.32
NIF3L1-201ENST00000359683 AAK1Q2M2I8 961 aa13.05□□□□□ -0.32
NIF3L1-201ENST00000359683 ANKRD54Q6NXT1 300 aa13.05□□□□□ -0.32
NIF3L1-201ENST00000359683 XYLT1Q86Y38 959 aa13.05□□□□□ -0.32
NIF3L1-201ENST00000359683 DNAAF5Q86Y56 855 aa13.05□□□□□ -0.32
NIF3L1-201ENST00000359683 SCUBE3Q8IX30 993 aa13.05□□□□□ -0.32
NIF3L1-201ENST00000359683 STKLD1Q8NE28 680 aa13.05□□□□□ -0.32
NIF3L1-201ENST00000359683 IPO4Q8TEX9 1081 aaKnown RBP13.05□□□□□ -0.32
NIF3L1-201ENST00000359683 ZNF707Q96C28 371 aaPredicted RBP13.05□□□□□ -0.32
NIF3L1-201ENST00000359683 TRMT2BQ96GJ1 504 aaKnown RBP13.05□□□□□ -0.32
NIF3L1-201ENST00000359683 ZNF512Q96ME7 567 aaPredicted RBP13.05□□□□□ -0.32
NIF3L1-201ENST00000359683 ZNF830Q96NB3 372 aaPredicted RBP13.05□□□□□ -0.32
NIF3L1-201ENST00000359683 C11orf70Q9BRQ4 267 aa13.05□□□□□ -0.32
NIF3L1-201ENST00000359683 LRRC3Q9BY71 257 aa13.05□□□□□ -0.32
NIF3L1-201ENST00000359683 ULBP1Q9BZM6 244 aa13.05□□□□□ -0.32
NIF3L1-201ENST00000359683 EHD2Q9NZN4 543 aa13.05□□□□□ -0.32
NIF3L1-201ENST00000359683 SCML2Q9UQR0 700 aa13.05□□□□□ -0.32
NIF3L1-201ENST00000359683 FAM170AA1A519 330 aa13.04□□□□□ -0.32
NIF3L1-201ENST00000359683 ANKRD62A6NC57 917 aa13.04□□□□□ -0.32
NIF3L1-201ENST00000359683 PIK3R2O00459 728 aa13.04□□□□□ -0.32
NIF3L1-201ENST00000359683 XYLBO75191 536 aa13.04□□□□□ -0.32
NIF3L1-201ENST00000359683 FBXO21O94952 628 aa13.04□□□□□ -0.32
NIF3L1-201ENST00000359683 ZBED1O96006 694 aa13.04□□□□□ -0.32
NIF3L1-201ENST00000359683 H2AFZP0C0S5 128 aa13.04□□□□□ -0.32
NIF3L1-201ENST00000359683 SRGAP2BP0DMP2 458 aa13.04□□□□□ -0.32
NIF3L1-201ENST00000359683 HOXB8P17481 243 aaPredicted RBP13.04□□□□□ -0.32
NIF3L1-201ENST00000359683 YWHAQP27348 245 aa13.04□□□□□ -0.32
NIF3L1-201ENST00000359683 MAGEA1P43355 309 aa13.04□□□□□ -0.32
NIF3L1-201ENST00000359683 GALCP54803 685 aa13.04□□□□□ -0.32
NIF3L1-201ENST00000359683 GSCP56915 257 aaPredicted RBP13.04□□□□□ -0.32
NIF3L1-201ENST00000359683 C2CD6Q53TS8 623 aa13.04□□□□□ -0.32
NIF3L1-201ENST00000359683 SYCE2Q6PIF2 218 aa13.04□□□□□ -0.32
NIF3L1-201ENST00000359683 H2AFVQ71UI9 128 aa13.04□□□□□ -0.32
NIF3L1-201ENST00000359683 BHLHA9Q7RTU4 235 aa13.04□□□□□ -0.32
NIF3L1-201ENST00000359683 ZDHHC17Q8IUH5 632 aa13.04□□□□□ -0.32
NIF3L1-201ENST00000359683 SIX6OS1Q8N1H7 587 aa13.04□□□□□ -0.32
NIF3L1-201ENST00000359683 ELMOD1Q8N336 334 aa13.04□□□□□ -0.32
NIF3L1-201ENST00000359683 C12orf76Q8N812 135 aaPredicted RBP13.04□□□□□ -0.32
NIF3L1-201ENST00000359683 IRGQQ8WZA9 623 aa13.04□□□□□ -0.32
NIF3L1-201ENST00000359683 PABPC5Q96DU9 382 aaKnown RBP13.04□□□□□ -0.32
NIF3L1-201ENST00000359683 MCRS1Q96EZ8 462 aa13.04□□□□□ -0.32
NIF3L1-201ENST00000359683 SYNCQ9H7C4 482 aa13.04□□□□□ -0.32
NIF3L1-201ENST00000359683 SFXN1Q9H9B4 322 aa13.04□□□□□ -0.32
NIF3L1-201ENST00000359683 CLEC1BQ9P126 229 aa13.04□□□□□ -0.32
NIF3L1-201ENST00000359683 WDR35Q9P2L0 1181 aa13.04□□□□□ -0.32
NIF3L1-201ENST00000359683 INTUQ9ULD6 942 aa13.04□□□□□ -0.32
NIF3L1-201ENST00000359683 STRIP2Q9ULQ0 834 aa13.04□□□□□ -0.32
NIF3L1-201ENST00000359683 REXO2Q9Y3B8 237 aaKnown RBP13.04□□□□□ -0.32
NIF3L1-201ENST00000359683 PCDHA13Q9Y5I0 950 aa13.04□□□□□ -0.32
NIF3L1-201ENST00000359683 MUC3AQ02505 3323 aa13.04□□□□□ -0.32
NIF3L1-201ENST00000359683 TCRBV5S1A1TA0A578 114 aa13.03□□□□□ -0.32
NIF3L1-201ENST00000359683 USP17L7P0C7H9 530 aa13.03□□□□□ -0.32
NIF3L1-201ENST00000359683 MYBL1P10243 752 aa13.03□□□□□ -0.32
NIF3L1-201ENST00000359683 PTPN2P17706 415 aa13.03□□□□□ -0.32
NIF3L1-201ENST00000359683 LTBRP36941 435 aa13.03□□□□□ -0.32
NIF3L1-201ENST00000359683 SCNN1AP37088 669 aa13.03□□□□□ -0.32
NIF3L1-201ENST00000359683 EPHA5P54756 1037 aa13.03□□□□□ -0.32
NIF3L1-201ENST00000359683 DAOAP59103 153 aa13.03□□□□□ -0.32
NIF3L1-201ENST00000359683 KRT83P78385 493 aa13.03□□□□□ -0.32
NIF3L1-201ENST00000359683 SLC6A3Q01959 620 aa13.03□□□□□ -0.32
NIF3L1-201ENST00000359683 TAF10Q12962 218 aa13.03□□□□□ -0.32
NIF3L1-201ENST00000359683 TAF12Q16514 161 aa13.03□□□□□ -0.32
NIF3L1-201ENST00000359683 CYP4A22Q5TCH4 519 aa13.03□□□□□ -0.32
NIF3L1-201ENST00000359683 OR6B2Q6IFH4 312 aa13.03□□□□□ -0.32
NIF3L1-201ENST00000359683 OLFML1Q6UWY5 402 aa13.03□□□□□ -0.32
NIF3L1-201ENST00000359683 FAM183BPQ6ZVS7 135 aa13.03□□□□□ -0.32
NIF3L1-201ENST00000359683 NDRG1Q92597 394 aaKnown RBP13.03□□□□□ -0.32
NIF3L1-201ENST00000359683 KHSRPQ92945 711 aaKnown RBP eCLIP13.03□□□□□ -0.32
NIF3L1-201ENST00000359683 TRIM11Q96F44 468 aa13.03□□□□□ -0.32
NIF3L1-201ENST00000359683 PACSIN1Q9BY11 444 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms