RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 GIT2Q14161 759 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 PSMG1O95456 288 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 TMTC4Q5T4D3 741 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 RPF1Q9H9Y2 349 aaKnown RBP4.26□□□□□ -1.73
SYNE2-204ENST00000358025 SPC25Q9HBM1 224 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 TPRKBQ9Y3C4 175 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 STX7O15400 261 aaKnown RBP4.26□□□□□ -1.73
SYNE2-204ENST00000358025 LRRC14Q15048 493 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 FAM160B1Q5W0V3 765 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 PHF13Q86YI8 300 aaPredicted RBP4.26□□□□□ -1.73
SYNE2-204ENST00000358025 MKL1Q969V6 931 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 INO80BQ9C086 356 aaPredicted RBP4.26□□□□□ -1.73
SYNE2-204ENST00000358025 RIC8BQ9NVN3 520 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 DNAJC28Q9NX36 388 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 FOXN3O00409 490 aaPredicted RBP4.26□□□□□ -1.73
SYNE2-204ENST00000358025 ASMTLO95671 621 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 ATICP31939 592 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 CCR3P51677 355 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 CAPRIN1Q14444 709 aaKnown RBP4.26□□□□□ -1.73
SYNE2-204ENST00000358025 ZPBP2Q6X784 338 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 TRABD2AQ86V40 505 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 KIF2BQ8N4N8 673 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 RDH13Q8NBN7 331 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 BMP3P12645 472 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 CDC25AP30304 524 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 GP5P40197 560 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 TBL3Q12788 808 aaKnown RBP4.26□□□□□ -1.73
SYNE2-204ENST00000358025 PTK7Q13308 1070 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 ZNF410Q86VK4 478 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 NT5DC4Q86YG4 428 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 EFHBQ8N7U6 833 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 NCLNQ969V3 563 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 GDF11O95390 407 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 PLEKP08567 350 aaPredicted RBP4.26□□□□□ -1.73
SYNE2-204ENST00000358025 SLC7A1P30825 629 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 ARL13BQ3SXY8 428 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 CYP2U1Q7Z449 544 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 PLD3Q8IV08 490 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 STX19Q8N4C7 294 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 MARVELD2Q8N4S9 558 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 ATP6V1E2Q96A05 226 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 OXNAD1Q96HP4 312 aaPredicted RBP4.26□□□□□ -1.73
SYNE2-204ENST00000358025 SLC25A23Q9BV35 468 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 PUS3Q9BZE2 481 aaKnown RBP4.26□□□□□ -1.73
SYNE2-204ENST00000358025 AASDHPPTQ9NRN7 309 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 TMEM114B3SHH9 223 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 CLDN3O15551 220 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 ZNF862O60290 1169 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 CCND2P30279 289 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 RPL21P46778 160 aaKnown RBP4.26□□□□□ -1.73
SYNE2-204ENST00000358025 PRKG1Q13976 671 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 SNRNP35Q16560 246 aaKnown RBP4.26□□□□□ -1.73
SYNE2-204ENST00000358025 FKBP1CQ5VVH2 108 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 HEATR6Q6AI08 1181 aaKnown RBP4.26□□□□□ -1.73
SYNE2-204ENST00000358025 TTC23LQ6PF05 361 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 RFX6Q8HWS3 928 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 NTPCRQ9BSD7 190 aaKnown RBP4.26□□□□□ -1.73
SYNE2-204ENST00000358025 KCNMB3Q9NPA1 279 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 ZDHHC7Q9NXF8 308 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 IGSF9BQ9UPX0 1349 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 NCOA4Q13772 614 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 SMYD1Q8NB12 490 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 CCNE2O96020 404 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 OCM2P0CE71 109 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 OCMP0CE72 109 aaPredicted RBP4.25□□□□□ -1.73
SYNE2-204ENST00000358025 SLC18A2Q05940 514 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 FBXW8Q8N3Y1 598 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 LZTR1Q8N653 840 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 GPKOWQ92917 476 aaPredicted RBP eCLIP4.25□□□□□ -1.73
SYNE2-204ENST00000358025 BEGAINQ9BUH8 593 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 EHD4Q9H223 541 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 KIDINS220Q9ULH0 1771 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 TRIM49BA6NDI0 452 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 SLC22A1O15245 554 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 ACTR2P61160 394 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 PDK3Q15120 406 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 CLEC16AQ2KHT3 1053 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 DNAJB7Q7Z6W7 309 aaPredicted RBP4.25□□□□□ -1.73
SYNE2-204ENST00000358025 ZBTB18Q99592 522 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 MYO5BQ9ULV0 1848 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 F5H6K3 240 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 ACTR3P61158 418 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 PDE1CQ14123 709 aaPredicted RBP4.25□□□□□ -1.73
SYNE2-204ENST00000358025 GRM2Q14416 872 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 ZNF846Q147U1 533 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 MFSD14BQ5SR56 506 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 JADE1Q6IE81 842 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 BLOC1S5Q8TDH9 187 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 PNPLA8Q9NP80 782 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 ASLP04424 464 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 NMT1P30419 496 aaKnown RBP4.25□□□□□ -1.73
SYNE2-204ENST00000358025 ALDH1A3P47895 512 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 PCBP1Q15365 356 aaKnown RBP eCLIP4.25□□□□□ -1.73
SYNE2-204ENST00000358025 ADGRD1Q6QNK2 874 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 AGR3Q8TD06 166 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 RAB6BQ9NRW1 208 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 ARHGEF28Q8N1W1 1705 aaKnown RBP4.25□□□□□ -1.73
SYNE2-204ENST00000358025 MYOM1P52179 1685 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 VDRP11473 427 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 PTX3P26022 381 aaPredicted RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms