RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 HOXB1P14653 301 aaPredicted RBP9.15□□□□□ -0.94
COL4A3BP-202ENST00000357457 HOXD12P35452 270 aa9.15□□□□□ -0.94
COL4A3BP-202ENST00000357457 GRIA2P42262 883 aa9.15□□□□□ -0.94
COL4A3BP-202ENST00000357457 MLLT3P42568 568 aaPredicted RBP9.15□□□□□ -0.94
COL4A3BP-202ENST00000357457 DPP6P42658 865 aa9.15□□□□□ -0.94
COL4A3BP-202ENST00000357457 PTGER3P43115 390 aa9.15□□□□□ -0.94
COL4A3BP-202ENST00000357457 MYO1EQ12965 1108 aa9.15□□□□□ -0.94
COL4A3BP-202ENST00000357457 MMRN1Q13201 1228 aa9.15□□□□□ -0.94
COL4A3BP-202ENST00000357457 SEMA3BQ13214 749 aa9.15□□□□□ -0.94
COL4A3BP-202ENST00000357457 BYSLQ13895 437 aaKnown RBP9.15□□□□□ -0.94
COL4A3BP-202ENST00000357457 SURF1Q15526 300 aa9.15□□□□□ -0.94
COL4A3BP-202ENST00000357457 DUOXA2Q1HG44 320 aa9.15□□□□□ -0.94
COL4A3BP-202ENST00000357457 UAP1L1Q3KQV9 507 aa9.15□□□□□ -0.94
COL4A3BP-202ENST00000357457 C8orf34Q49A92 452 aa9.15□□□□□ -0.94
COL4A3BP-202ENST00000357457 EOGTQ5NDL2 527 aa9.15□□□□□ -0.94
COL4A3BP-202ENST00000357457 EMC10Q5UCC4 262 aa9.15□□□□□ -0.94
COL4A3BP-202ENST00000357457 RRAGBQ5VZM2 374 aa9.15□□□□□ -0.94
COL4A3BP-202ENST00000357457 GPD1LQ8N335 351 aa9.15□□□□□ -0.94
COL4A3BP-202ENST00000357457 ALLCQ8N6M5 410 aa9.15□□□□□ -0.94
COL4A3BP-202ENST00000357457 FRMD1Q8N878 549 aa9.15□□□□□ -0.94
COL4A3BP-202ENST00000357457 TXNDC5Q8NBS9 432 aaKnown RBP9.15□□□□□ -0.94
COL4A3BP-202ENST00000357457 TTC16Q8NEE8 873 aa9.15□□□□□ -0.94
COL4A3BP-202ENST00000357457 DEFB124Q8NES8 71 aa9.15□□□□□ -0.94
COL4A3BP-202ENST00000357457 OR5B17Q8NGF7 314 aa9.15□□□□□ -0.94
COL4A3BP-202ENST00000357457 WHAMMQ8TF30 809 aa9.15□□□□□ -0.94
COL4A3BP-202ENST00000357457 RLN3Q8WXF3 142 aa9.15□□□□□ -0.94
COL4A3BP-202ENST00000357457 PCED1BQ96HM7 432 aa9.15□□□□□ -0.94
COL4A3BP-202ENST00000357457 ANKRD36BP1Q96IX9 119 aa9.15□□□□□ -0.94
COL4A3BP-202ENST00000357457 DUSP9Q99956 384 aaKnown RBP9.15□□□□□ -0.94
COL4A3BP-202ENST00000357457 NUSAP1Q9BXS6 441 aaKnown RBP9.15□□□□□ -0.94
COL4A3BP-202ENST00000357457 PCIF1Q9H4Z3 704 aa9.15□□□□□ -0.94
COL4A3BP-202ENST00000357457 SLC32A1Q9H598 525 aa9.15□□□□□ -0.94
COL4A3BP-202ENST00000357457 POLMQ9NP87 494 aaPredicted RBP9.15□□□□□ -0.94
COL4A3BP-202ENST00000357457 CCDC39Q9UFE4 941 aa9.15□□□□□ -0.94
COL4A3BP-202ENST00000357457 PILRBQ9UKJ0 227 aa9.15□□□□□ -0.94
COL4A3BP-202ENST00000357457 MSRB2Q9Y3D2 182 aa9.15□□□□□ -0.94
COL4A3BP-202ENST00000357457 NEUROG3Q9Y4Z2 214 aa9.15□□□□□ -0.94
COL4A3BP-202ENST00000357457 NME7Q9Y5B8 376 aa9.15□□□□□ -0.94
COL4A3BP-202ENST00000357457 CPQQ9Y646 472 aa9.15□□□□□ -0.94
COL4A3BP-202ENST00000357457 PTPRJQ12913 1337 aa9.14□□□□□ -0.95
COL4A3BP-202ENST00000357457 PCDH15Q96QU1 1955 aa9.14□□□□□ -0.95
COL4A3BP-202ENST00000357457 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.14□□□□□ -0.95
COL4A3BP-202ENST00000357457 ZNF233A6NK53 670 aa9.14□□□□□ -0.95
COL4A3BP-202ENST00000357457 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.14□□□□□ -0.95
COL4A3BP-202ENST00000357457 F8VP50 259 aa9.14□□□□□ -0.95
COL4A3BP-202ENST00000357457 KLF8O95600 359 aaPredicted RBP9.14□□□□□ -0.95
COL4A3BP-202ENST00000357457 CST3P01034 146 aaPredicted RBP9.14□□□□□ -0.95
COL4A3BP-202ENST00000357457 CAPNS1P04632 268 aa9.14□□□□□ -0.95
COL4A3BP-202ENST00000357457 APODP05090 189 aa9.14□□□□□ -0.95
COL4A3BP-202ENST00000357457 ENGP17813 658 aa9.14□□□□□ -0.95
COL4A3BP-202ENST00000357457 GNL1P36915 607 aaPredicted RBP9.14□□□□□ -0.95
COL4A3BP-202ENST00000357457 PSMC1P62191 440 aaKnown RBP9.14□□□□□ -0.95
COL4A3BP-202ENST00000357457 TAF10Q12962 218 aa9.14□□□□□ -0.95
COL4A3BP-202ENST00000357457 SNX30Q5VWJ9 437 aa9.14□□□□□ -0.95
COL4A3BP-202ENST00000357457 LMBRD2Q68DH5 695 aaPredicted RBP9.14□□□□□ -0.95
COL4A3BP-202ENST00000357457 C12orf40Q86WS4 652 aa9.14□□□□□ -0.95
COL4A3BP-202ENST00000357457 DDX42Q86XP3 938 aaKnown RBP eCLIP9.14□□□□□ -0.95
COL4A3BP-202ENST00000357457 ETFBKMTQ8IXQ9 262 aa9.14□□□□□ -0.95
COL4A3BP-202ENST00000357457 TMEFF1Q8IYR6 380 aa9.14□□□□□ -0.95
COL4A3BP-202ENST00000357457 SYCP3Q8IZU3 236 aa9.14□□□□□ -0.95
COL4A3BP-202ENST00000357457 OTUB2Q96DC9 234 aa9.14□□□□□ -0.95
COL4A3BP-202ENST00000357457 SPACA7Q96KW9 195 aa9.14□□□□□ -0.95
COL4A3BP-202ENST00000357457 EPAS1Q99814 870 aa9.14□□□□□ -0.95
COL4A3BP-202ENST00000357457 FGFBP2Q9BYJ0 223 aa9.14□□□□□ -0.95
COL4A3BP-202ENST00000357457 TMEM30AQ9NV96 361 aa9.14□□□□□ -0.95
COL4A3BP-202ENST00000357457 IL37Q9NZH6 218 aa9.14□□□□□ -0.95
COL4A3BP-202ENST00000357457 TBC1D14Q9P2M4 693 aa9.14□□□□□ -0.95
COL4A3BP-202ENST00000357457 FBXO2Q9UK22 296 aaPredicted RBP9.14□□□□□ -0.95
COL4A3BP-202ENST00000357457 SMC3Q9UQE7 1217 aa9.14□□□□□ -0.95
COL4A3BP-202ENST00000357457 STARD13Q9Y3M8 1113 aa9.14□□□□□ -0.95
COL4A3BP-202ENST00000357457 CLIC4Q9Y696 253 aa9.14□□□□□ -0.95
COL4A3BP-202ENST00000357457 MORC2Q9Y6X9 1032 aaPredicted RBP9.14□□□□□ -0.95
COL4A3BP-202ENST00000357457 ASXL3Q9C0F0 2248 aa9.14□□□□□ -0.95
COL4A3BP-202ENST00000357457 MYH10P35580 1976 aa9.13□□□□□ -0.95
COL4A3BP-202ENST00000357457 E2F8A0AVK6 867 aa9.13□□□□□ -0.95
COL4A3BP-202ENST00000357457 H0Y626 953 aa9.13□□□□□ -0.95
COL4A3BP-202ENST00000357457 PRPF6O94906 941 aaKnown RBP9.13□□□□□ -0.95
COL4A3BP-202ENST00000357457 TRIM16O95361 564 aa9.13□□□□□ -0.95
COL4A3BP-202ENST00000357457 STAU1O95793 577 aaKnown RBP9.13□□□□□ -0.95
COL4A3BP-202ENST00000357457 ADH1CP00326 375 aa9.13□□□□□ -0.95
COL4A3BP-202ENST00000357457 TNNC2P02585 160 aa9.13□□□□□ -0.95
COL4A3BP-202ENST00000357457 ADH5P11766 374 aa9.13□□□□□ -0.95
COL4A3BP-202ENST00000357457 PTPN1P18031 435 aaKnown RBP9.13□□□□□ -0.95
COL4A3BP-202ENST00000357457 ITPKAP23677 461 aa9.13□□□□□ -0.95
COL4A3BP-202ENST00000357457 ANXA13P27216 316 aa9.13□□□□□ -0.95
COL4A3BP-202ENST00000357457 HOXD13P35453 343 aa9.13□□□□□ -0.95
COL4A3BP-202ENST00000357457 CACNA2D1P54289 1103 aa9.13□□□□□ -0.95
COL4A3BP-202ENST00000357457 CYP27A1Q02318 531 aa9.13□□□□□ -0.95
COL4A3BP-202ENST00000357457 RESTQ13127 1097 aa9.13□□□□□ -0.95
COL4A3BP-202ENST00000357457 COL9A2Q14055 689 aaPredicted RBP9.13□□□□□ -0.95
COL4A3BP-202ENST00000357457 DUOXA1Q1HG43 343 aa9.13□□□□□ -0.95
COL4A3BP-202ENST00000357457 LY6G5CQ5SRR4 150 aa9.13□□□□□ -0.95
COL4A3BP-202ENST00000357457 TDRD10Q5VZ19 366 aaKnown RBP9.13□□□□□ -0.95
COL4A3BP-202ENST00000357457 LRSAM1Q6UWE0 723 aa9.13□□□□□ -0.95
COL4A3BP-202ENST00000357457 CCDC73Q6ZRK6 1079 aa9.13□□□□□ -0.95
COL4A3BP-202ENST00000357457 TRAPPC11Q7Z392 1133 aa9.13□□□□□ -0.95
COL4A3BP-202ENST00000357457 CBWD2Q8IUF1 395 aa9.13□□□□□ -0.95
COL4A3BP-202ENST00000357457 WDR49Q8IV35 697 aa9.13□□□□□ -0.95
COL4A3BP-202ENST00000357457 CEP76Q8TAP6 659 aa9.13□□□□□ -0.95
COL4A3BP-202ENST00000357457 OVCA2Q8WZ82 227 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms