RNA–Protein interactions for RNA: ENST00000355301.8

NPHP1-202, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-202ENST00000355301 CEP104O60308 925 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 ZBED1O96006 694 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 CTAGE8P0CG41 777 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 PCK1P35558 622 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 GRIK1P39086 918 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 PAFAH1B1P43034 410 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 PTPN9P43378 593 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 GLUD2P49448 558 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 RABGGTBP53611 331 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 DAOAP59103 153 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 TAS2R40P59535 323 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 YWHAZP63104 245 aaKnown RBP10.07□□□□□ -0.8
NPHP1-202ENST00000355301 ITIH3Q06033 890 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 CCDC14Q49A88 953 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 CCDC181Q5TID7 509 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 PM20D1Q6GTS8 502 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 POLNQ7Z5Q5 900 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 CTAGE6Q86UF2 777 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 CTAGE4Q8IX94 777 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 GPR65Q8IYL9 337 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 ARFGAP1Q8N6T3 406 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 LRRN4CLQ8ND94 238 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 C8orf48Q96LL4 319 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 RNPC3Q96LT9 517 aaKnown RBP10.07□□□□□ -0.8
NPHP1-202ENST00000355301 C11orf84Q9BUA3 381 aaPredicted RBP10.07□□□□□ -0.8
NPHP1-202ENST00000355301 ULBP1Q9BZM6 244 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 COL4A4P53420 1690 aaPredicted RBP10.07□□□□□ -0.8
NPHP1-202ENST00000355301 MTMR11A4FU01 709 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 PGRMC1O00264 195 aaKnown RBP10.07□□□□□ -0.8
NPHP1-202ENST00000355301 TLL1O43897 1013 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 TADA3O75528 432 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 RNF8O76064 485 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 VNN2O95498 520 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 PYGMP11217 842 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 TCF4P15884 667 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 SDC4P31431 198 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 MATKP42679 507 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 ROR1Q01973 937 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 SLC25A11Q02978 314 aaKnown RBP10.07□□□□□ -0.8
NPHP1-202ENST00000355301 COL13A1Q5TAT6 717 aaPredicted RBP10.07□□□□□ -0.8
NPHP1-202ENST00000355301 RNF19BQ6ZMZ0 732 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 BHLHA9Q7RTU4 235 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 KATNAL2Q8IYT4 538 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 ATAD1Q8NBU5 361 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 IRGQQ8WZA9 623 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 CENPIQ92674 756 aaPredicted RBP10.07□□□□□ -0.8
NPHP1-202ENST00000355301 CFAP57Q96MR6 1250 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 PGLYRP2Q96PD5 576 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 CLSTN3Q9BQT9 956 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 DDX23Q9BUQ8 820 aaKnown RBP10.07□□□□□ -0.8
NPHP1-202ENST00000355301 PLVAPQ9BX97 442 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 POPDC2Q9HBU9 364 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 EHD2Q9NZN4 543 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 WDR27A2RRH5 827 aa10.06□□□□□ -0.8
NPHP1-202ENST00000355301 YJEFN3A6XGL0 299 aa10.06□□□□□ -0.8
NPHP1-202ENST00000355301 E7ENQ6 273 aa10.06□□□□□ -0.8
NPHP1-202ENST00000355301 ADAM12O43184 909 aa10.06□□□□□ -0.8
NPHP1-202ENST00000355301 DAB1O75553 588 aa10.06□□□□□ -0.8
NPHP1-202ENST00000355301 FGF18O76093 207 aa10.06□□□□□ -0.8
NPHP1-202ENST00000355301 USP17L7P0C7H9 530 aa10.06□□□□□ -0.8
NPHP1-202ENST00000355301 DESP17661 470 aa10.06□□□□□ -0.8
NPHP1-202ENST00000355301 OR1D2P34982 312 aa10.06□□□□□ -0.8
NPHP1-202ENST00000355301 NOS2P35228 1153 aa10.06□□□□□ -0.8
NPHP1-202ENST00000355301 SLC5A3P53794 718 aa10.06□□□□□ -0.8
NPHP1-202ENST00000355301 ARPP19P56211 112 aa10.06□□□□□ -0.8
NPHP1-202ENST00000355301 TUBB4BP68371 445 aa10.06□□□□□ -0.8
NPHP1-202ENST00000355301 KRT17Q04695 432 aa10.06□□□□□ -0.8
NPHP1-202ENST00000355301 CLUL1Q15846 466 aa10.06□□□□□ -0.8
NPHP1-202ENST00000355301 HADHQ16836 314 aaKnown RBP10.06□□□□□ -0.8
NPHP1-202ENST00000355301 C15orf59Q2T9L4 293 aaPredicted RBP10.06□□□□□ -0.8
NPHP1-202ENST00000355301 VPS52Q8N1B4 723 aa10.06□□□□□ -0.8
NPHP1-202ENST00000355301 SPATA4Q8NEY3 305 aa10.06□□□□□ -0.8
NPHP1-202ENST00000355301 EXD1Q8NHP7 514 aa10.06□□□□□ -0.8
NPHP1-202ENST00000355301 NDRG1Q92597 394 aaKnown RBP10.06□□□□□ -0.8
NPHP1-202ENST00000355301 NT5C3BQ969T7 300 aa10.06□□□□□ -0.8
NPHP1-202ENST00000355301 FAM149B1Q96BN6 582 aa10.06□□□□□ -0.8
NPHP1-202ENST00000355301 SLC2A13Q96QE2 648 aa10.06□□□□□ -0.8
NPHP1-202ENST00000355301 NCAPGQ9BPX3 1015 aa10.06□□□□□ -0.8
NPHP1-202ENST00000355301 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.06□□□□□ -0.8
NPHP1-202ENST00000355301 SMARCAL1Q9NZC9 954 aa10.06□□□□□ -0.8
NPHP1-202ENST00000355301 CHD7Q9P2D1 2997 aa10.06□□□□□ -0.8
NPHP1-202ENST00000355301 CHD9Q3L8U1 2897 aa10.06□□□□□ -0.8
NPHP1-202ENST00000355301 C2CD2LO14523 706 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 ABLIM3O94929 683 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 URODP06132 367 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 FYNP06241 537 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 KRT7P08729 469 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 RPL17P18621 184 aaKnown RBP10.05□□□□□ -0.8
NPHP1-202ENST00000355301 MIPP30301 263 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 SSR1P43307 286 aaKnown RBP10.05□□□□□ -0.8
NPHP1-202ENST00000355301 ATP11AP98196 1134 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 ZNF211Q13398 564 aaPredicted RBP10.05□□□□□ -0.8
NPHP1-202ENST00000355301 SLC25A52Q3SY17 297 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 SH3PXD2AQ5TCZ1 1133 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 SEL1L2Q5TEA6 688 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 RSRC2Q7L4I2 434 aaKnown RBP10.05□□□□□ -0.8
NPHP1-202ENST00000355301 BEND5Q7L4P6 421 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 SCN4BQ8IWT1 228 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 DEFB106AQ8N104 65 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 SCAMP5Q8TAC9 235 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms