RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 CICQ96RK0 1608 aaPredicted RBP13.76□□□□□ -0.21
IFT88-202ENST00000351808 KLF11O14901 512 aa13.76□□□□□ -0.21
IFT88-202ENST00000351808 MRPS22P82650 360 aaKnown RBP13.76□□□□□ -0.21
IFT88-202ENST00000351808 ZBTB17Q13105 803 aa13.76□□□□□ -0.21
IFT88-202ENST00000351808 CHI3L2Q15782 390 aa13.76□□□□□ -0.21
IFT88-202ENST00000351808 CCDC33Q8N5R6 958 aa13.76□□□□□ -0.21
IFT88-202ENST00000351808 TBC1D15Q8TC07 691 aa13.76□□□□□ -0.21
IFT88-202ENST00000351808 EPS8L1Q8TE68 723 aa13.76□□□□□ -0.21
IFT88-202ENST00000351808 E2F7Q96AV8 911 aa13.76□□□□□ -0.21
IFT88-202ENST00000351808 DHRS4Q9BTZ2 278 aa13.76□□□□□ -0.21
IFT88-202ENST00000351808 SLC2A11Q9BYW1 496 aa13.76□□□□□ -0.21
IFT88-202ENST00000351808 ZFYVE28Q9HCC9 887 aa13.76□□□□□ -0.21
IFT88-202ENST00000351808 DNPEPQ9ULA0 475 aa13.76□□□□□ -0.21
IFT88-202ENST00000351808 CROCCQ5TZA2 2017 aa13.76□□□□□ -0.21
IFT88-202ENST00000351808 KAT6AQ92794 2004 aa13.76□□□□□ -0.21
IFT88-202ENST00000351808 CYB561D2O14569 222 aa13.76□□□□□ -0.21
IFT88-202ENST00000351808 KDM1AO60341 852 aa13.76□□□□□ -0.21
IFT88-202ENST00000351808 ATE1O95260 518 aa13.76□□□□□ -0.21
IFT88-202ENST00000351808 CCDC130P13994 396 aa13.76□□□□□ -0.21
IFT88-202ENST00000351808 ITGAXP20702 1163 aa13.76□□□□□ -0.21
IFT88-202ENST00000351808 KCNC4Q03721 635 aa13.76□□□□□ -0.21
IFT88-202ENST00000351808 ADGRE1Q14246 886 aa13.76□□□□□ -0.21
IFT88-202ENST00000351808 MSS51Q4VC12 460 aa13.76□□□□□ -0.21
IFT88-202ENST00000351808 FAM209AQ5JX71 171 aa13.76□□□□□ -0.21
IFT88-202ENST00000351808 SLC47A2Q86VL8 602 aa13.76□□□□□ -0.21
IFT88-202ENST00000351808 TICAM1Q8IUC6 712 aa13.76□□□□□ -0.21
IFT88-202ENST00000351808 CRLF3Q8IUI8 442 aa13.76□□□□□ -0.21
IFT88-202ENST00000351808 SAMD3Q8N6K7 520 aa13.76□□□□□ -0.21
IFT88-202ENST00000351808 LMO3Q8TAP4 145 aa13.76□□□□□ -0.21
IFT88-202ENST00000351808 NLRP7Q8WX94 980 aa13.76□□□□□ -0.21
IFT88-202ENST00000351808 RPGRQ92834 1020 aaKnown RBP13.76□□□□□ -0.21
IFT88-202ENST00000351808 NLRP4Q96MN2 994 aa13.76□□□□□ -0.21
IFT88-202ENST00000351808 SCINQ9Y6U3 715 aa13.76□□□□□ -0.21
IFT88-202ENST00000351808 RGPD5Q99666 1765 aa13.76□□□□□ -0.21
IFT88-202ENST00000351808 KRBA1A5PL33 1030 aa13.75□□□□□ -0.21
IFT88-202ENST00000351808 SULT1C4O75897 302 aa13.75□□□□□ -0.21
IFT88-202ENST00000351808 ADCY7P51828 1080 aa13.75□□□□□ -0.21
IFT88-202ENST00000351808 PSMC1P62191 440 aaKnown RBP13.75□□□□□ -0.21
IFT88-202ENST00000351808 FAAP100Q0VG06 881 aa13.75□□□□□ -0.21
IFT88-202ENST00000351808 KAZNQ674X7 775 aa13.75□□□□□ -0.21
IFT88-202ENST00000351808 LILRA2Q8N149 483 aa13.75□□□□□ -0.21
IFT88-202ENST00000351808 SLC44A5Q8NCS7 719 aa13.75□□□□□ -0.21
IFT88-202ENST00000351808 USP33Q8TEY7 942 aa13.75□□□□□ -0.21
IFT88-202ENST00000351808 ACSS3Q9H6R3 686 aa13.75□□□□□ -0.21
IFT88-202ENST00000351808 GPRC5DQ9NZD1 345 aa13.75□□□□□ -0.21
IFT88-202ENST00000351808 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.75□□□□□ -0.21
IFT88-202ENST00000351808 PPME1Q9Y570 386 aa13.75□□□□□ -0.21
IFT88-202ENST00000351808 ATRNL1Q5VV63 1379 aa13.75□□□□□ -0.21
IFT88-202ENST00000351808 PFDN6O15212 129 aa13.75□□□□□ -0.21
IFT88-202ENST00000351808 H6PDO95479 791 aa13.75□□□□□ -0.21
IFT88-202ENST00000351808 CD247P20963 164 aa13.75□□□□□ -0.21
IFT88-202ENST00000351808 BMXP51813 675 aa13.75□□□□□ -0.21
IFT88-202ENST00000351808 FMO1Q01740 532 aa13.75□□□□□ -0.21
IFT88-202ENST00000351808 PTK7Q13308 1070 aa13.75□□□□□ -0.21
IFT88-202ENST00000351808 ITGADQ13349 1161 aa13.75□□□□□ -0.21
IFT88-202ENST00000351808 NR1D2Q14995 579 aa13.75□□□□□ -0.21
IFT88-202ENST00000351808 PEX5LQ8IYB4 626 aa13.75□□□□□ -0.21
IFT88-202ENST00000351808 APOL6Q9BWW8 343 aa13.75□□□□□ -0.21
IFT88-202ENST00000351808 GID8Q9NWU2 228 aa13.75□□□□□ -0.21
IFT88-202ENST00000351808 EPS15L1Q9UBC2 864 aa13.75□□□□□ -0.21
IFT88-202ENST00000351808 NOCTQ9UK39 431 aaKnown RBP13.75□□□□□ -0.21
IFT88-202ENST00000351808 CORINQ9Y5Q5 1042 aa13.75□□□□□ -0.21
IFT88-202ENST00000351808 A8MU76 341 aa13.74□□□□□ -0.21
IFT88-202ENST00000351808 IFNB1P01574 187 aa13.74□□□□□ -0.21
IFT88-202ENST00000351808 CD58P19256 250 aa13.74□□□□□ -0.21
IFT88-202ENST00000351808 RPA1P27694 616 aa13.74□□□□□ -0.21
IFT88-202ENST00000351808 MZF1P28698 734 aaPredicted RBP13.74□□□□□ -0.21
IFT88-202ENST00000351808 NMT1P30419 496 aaKnown RBP13.74□□□□□ -0.21
IFT88-202ENST00000351808 MSX2P35548 267 aaPredicted RBP13.74□□□□□ -0.21
IFT88-202ENST00000351808 MORF4L2Q15014 288 aa13.74□□□□□ -0.21
IFT88-202ENST00000351808 NRF1Q16656 503 aa13.74□□□□□ -0.21
IFT88-202ENST00000351808 HIF1AQ16665 826 aa13.74□□□□□ -0.21
IFT88-202ENST00000351808 BMT2Q1RMZ1 405 aa13.74□□□□□ -0.21
IFT88-202ENST00000351808 RGS21Q2M5E4 152 aa13.74□□□□□ -0.21
IFT88-202ENST00000351808 KLHL38Q2WGJ6 581 aa13.74□□□□□ -0.21
IFT88-202ENST00000351808 RNASEH2BQ5TBB1 312 aaKnown RBP13.74□□□□□ -0.21
IFT88-202ENST00000351808 LLGL2Q6P1M3 1020 aa13.74□□□□□ -0.21
IFT88-202ENST00000351808 GPR141Q7Z602 305 aa13.74□□□□□ -0.21
IFT88-202ENST00000351808 SDR16C5Q8N3Y7 309 aa13.74□□□□□ -0.21
IFT88-202ENST00000351808 TAB3Q8N5C8 712 aaPredicted RBP13.74□□□□□ -0.21
IFT88-202ENST00000351808 TMCO5AQ8N6Q1 288 aa13.74□□□□□ -0.21
IFT88-202ENST00000351808 ADCY4Q8NFM4 1077 aa13.74□□□□□ -0.21
IFT88-202ENST00000351808 SGF29Q96ES7 293 aa13.74□□□□□ -0.21
IFT88-202ENST00000351808 IFT122Q9HBG6 1241 aa13.74□□□□□ -0.21
IFT88-202ENST00000351808 GINM1Q9NU53 330 aa13.74□□□□□ -0.21
IFT88-202ENST00000351808 DKK3Q9UBP4 350 aa13.74□□□□□ -0.21
IFT88-202ENST00000351808 RIMS3Q9UJD0 308 aa13.74□□□□□ -0.21
IFT88-202ENST00000351808 POU2F3Q9UKI9 436 aa13.74□□□□□ -0.21
IFT88-202ENST00000351808 SQORQ9Y6N5 450 aa13.74□□□□□ -0.21
IFT88-202ENST00000351808 A0A1W2PPW3 197 aa13.74□□□□□ -0.21
IFT88-202ENST00000351808 COPEO14579 308 aa13.74□□□□□ -0.21
IFT88-202ENST00000351808 INHBBP09529 407 aa13.74□□□□□ -0.21
IFT88-202ENST00000351808 RPL10P27635 214 aaKnown RBP13.74□□□□□ -0.21
IFT88-202ENST00000351808 SLC18A2Q05940 514 aa13.74□□□□□ -0.21
IFT88-202ENST00000351808 BNIP3Q12983 259 aa13.74□□□□□ -0.21
IFT88-202ENST00000351808 FNBP1LQ5T0N5 605 aa13.74□□□□□ -0.21
IFT88-202ENST00000351808 ATG16L1Q676U5 607 aa13.74□□□□□ -0.21
IFT88-202ENST00000351808 ZCCHC23Q6ZST2 131 aa13.74□□□□□ -0.21
IFT88-202ENST00000351808 SH2D5Q6ZV89 423 aa13.74□□□□□ -0.21
IFT88-202ENST00000351808 HPS1Q92902 700 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms