RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 FANCLQ9NW38 375 aa23.33■■□□□ 1.33
SNX3-202ENST00000349379 GMIPQ9P107 970 aa23.33■■□□□ 1.33
SNX3-202ENST00000349379 PTMSP20962 102 aa23.32■■□□□ 1.32
SNX3-202ENST00000349379 ZXDBP98169 803 aa23.32■■□□□ 1.32
SNX3-202ENST00000349379 PLCB2Q00722 1185 aa23.32■■□□□ 1.32
SNX3-202ENST00000349379 KCNMA1Q12791 1236 aa23.32■■□□□ 1.32
SNX3-202ENST00000349379 RAB41Q5JT25 222 aa23.32■■□□□ 1.32
SNX3-202ENST00000349379 ASTLQ6HA08 431 aaPredicted RBP23.32■■□□□ 1.32
SNX3-202ENST00000349379 GJB7Q6PEY0 223 aa23.32■■□□□ 1.32
SNX3-202ENST00000349379 LCLAT1Q6UWP7 414 aa23.32■■□□□ 1.32
SNX3-202ENST00000349379 PIGZQ86VD9 579 aa23.32■■□□□ 1.32
SNX3-202ENST00000349379 SHDQ96IW2 340 aa23.32■■□□□ 1.32
SNX3-202ENST00000349379 FAM83CQ9BQN1 747 aa23.32■■□□□ 1.32
SNX3-202ENST00000349379 HSD3B7Q9H2F3 369 aa23.32■■□□□ 1.32
SNX3-202ENST00000349379 HEBP1Q9NRV9 189 aa23.32■■□□□ 1.32
SNX3-202ENST00000349379 CHORDC1Q9UHD1 332 aaPredicted RBP23.32■■□□□ 1.32
SNX3-202ENST00000349379 XPO1O14980 1071 aaKnown RBP23.31■■□□□ 1.32
SNX3-202ENST00000349379 ZNF18P17022 549 aa23.31■■□□□ 1.32
SNX3-202ENST00000349379 AOC1P19801 751 aa23.31■■□□□ 1.32
SNX3-202ENST00000349379 AVPR2P30518 371 aa23.31■■□□□ 1.32
SNX3-202ENST00000349379 PGFP49763 221 aa23.31■■□□□ 1.32
SNX3-202ENST00000349379 MFAP3P55082 362 aa23.31■■□□□ 1.32
SNX3-202ENST00000349379 MLLT6P55198 1093 aaPredicted RBP23.31■■□□□ 1.32
SNX3-202ENST00000349379 PDE4CQ08493 712 aa23.31■■□□□ 1.32
SNX3-202ENST00000349379 KRT31Q15323 416 aa23.31■■□□□ 1.32
SNX3-202ENST00000349379 CNGA2Q16280 664 aa23.31■■□□□ 1.32
SNX3-202ENST00000349379 CCDC186Q7Z3E2 898 aa23.31■■□□□ 1.32
SNX3-202ENST00000349379 TMEM105Q8N8V8 129 aa23.31■■□□□ 1.32
SNX3-202ENST00000349379 FLCNQ8NFG4 579 aa23.31■■□□□ 1.32
SNX3-202ENST00000349379 SHC3Q92529 594 aa23.31■■□□□ 1.32
SNX3-202ENST00000349379 ZFYVE19Q96K21 471 aa23.31■■□□□ 1.32
SNX3-202ENST00000349379 BPIFA3Q9BQP9 254 aa23.31■■□□□ 1.32
SNX3-202ENST00000349379 TAB2Q9NYJ8 693 aa23.31■■□□□ 1.32
SNX3-202ENST00000349379 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.31■■□□□ 1.32
SNX3-202ENST00000349379 BECN2A8MW95 431 aa23.3■■□□□ 1.32
SNX3-202ENST00000349379 TULP2O00295 520 aa23.3■■□□□ 1.32
SNX3-202ENST00000349379 COL9A1P20849 921 aa23.3■■□□□ 1.32
SNX3-202ENST00000349379 BRD2P25440 801 aaKnown RBP23.3■■□□□ 1.32
SNX3-202ENST00000349379 BST2Q10589 180 aaKnown RBP23.3■■□□□ 1.32
SNX3-202ENST00000349379 MTF1Q14872 753 aa23.3■■□□□ 1.32
SNX3-202ENST00000349379 STILQ15468 1287 aa23.3■■□□□ 1.32
SNX3-202ENST00000349379 TLR8Q9NR97 1041 aaKnown RBP23.3■■□□□ 1.32
SNX3-202ENST00000349379 THG1LQ9NWX6 298 aaKnown RBP23.3■■□□□ 1.32
SNX3-202ENST00000349379 HESX1Q9UBX0 185 aa23.3■■□□□ 1.32
SNX3-202ENST00000349379 AJAP1Q9UKB5 411 aaPredicted RBP23.3■■□□□ 1.32
SNX3-202ENST00000349379 MYOFQ9NZM1 2061 aa23.29■■□□□ 1.32
SNX3-202ENST00000349379 CYP26A1O43174 497 aa23.29■■□□□ 1.32
SNX3-202ENST00000349379 COCHO43405 550 aa23.29■■□□□ 1.32
SNX3-202ENST00000349379 ABL1P00519 1130 aa23.29■■□□□ 1.32
SNX3-202ENST00000349379 SETSIPP0DME0 302 aa23.29■■□□□ 1.32
SNX3-202ENST00000349379 PLA2G4AP47712 749 aa23.29■■□□□ 1.32
SNX3-202ENST00000349379 SLC8A3P57103 927 aa23.29■■□□□ 1.32
SNX3-202ENST00000349379 ANO6Q4KMQ2 910 aa23.29■■□□□ 1.32
SNX3-202ENST00000349379 HECTD3Q5T447 861 aa23.29■■□□□ 1.32
SNX3-202ENST00000349379 TPRG1Q6ZUI0 275 aa23.29■■□□□ 1.32
SNX3-202ENST00000349379 KIAA1958Q8N8K9 716 aa23.29■■□□□ 1.32
SNX3-202ENST00000349379 SH3RF2Q8TEC5 729 aa23.29■■□□□ 1.32
SNX3-202ENST00000349379 CYLDQ9NQC7 956 aa23.29■■□□□ 1.32
SNX3-202ENST00000349379 OSER1Q9NX31 292 aa23.29■■□□□ 1.32
SNX3-202ENST00000349379 KANSL1LA0AUZ9 987 aa23.28■■□□□ 1.32
SNX3-202ENST00000349379 PI15O43692 258 aa23.28■■□□□ 1.32
SNX3-202ENST00000349379 CALCAP01258 141 aa23.28■■□□□ 1.32
SNX3-202ENST00000349379 GLULP15104 373 aa23.28■■□□□ 1.32
SNX3-202ENST00000349379 SCD5Q86SK9 330 aa23.28■■□□□ 1.32
SNX3-202ENST00000349379 ZNF276Q8N554 614 aa23.28■■□□□ 1.32
SNX3-202ENST00000349379 UBA3Q8TBC4 463 aa23.28■■□□□ 1.32
SNX3-202ENST00000349379 SLC35F5Q8WV83 523 aa23.28■■□□□ 1.32
SNX3-202ENST00000349379 KCTD13Q8WZ19 329 aa23.28■■□□□ 1.32
SNX3-202ENST00000349379 ZFRQ96KR1 1074 aaKnown RBP23.28■■□□□ 1.32
SNX3-202ENST00000349379 CCSER2Q9H7U1 834 aa23.28■■□□□ 1.32
SNX3-202ENST00000349379 NMUR1Q9HB89 426 aa23.28■■□□□ 1.32
SNX3-202ENST00000349379 HPS4Q9NQG7 708 aa23.28■■□□□ 1.32
SNX3-202ENST00000349379 GKN1Q9NS71 199 aa23.28■■□□□ 1.32
SNX3-202ENST00000349379 LIMA1Q9UHB6 759 aaKnown RBP23.28■■□□□ 1.32
SNX3-202ENST00000349379 CPQQ9Y646 472 aa23.28■■□□□ 1.32
SNX3-202ENST00000349379 LRRC10BA6NIK2 292 aa23.27■■□□□ 1.32
SNX3-202ENST00000349379 LEFTY2O00292 366 aa23.27■■□□□ 1.32
SNX3-202ENST00000349379 LETM1O95202 739 aaPredicted RBP23.27■■□□□ 1.32
SNX3-202ENST00000349379 KRT5P13647 590 aa23.27■■□□□ 1.32
SNX3-202ENST00000349379 PSEN1P49768 467 aa23.27■■□□□ 1.32
SNX3-202ENST00000349379 MEA1Q16626 185 aa23.27■■□□□ 1.32
SNX3-202ENST00000349379 ARHGAP44Q17R89 818 aa23.27■■□□□ 1.32
SNX3-202ENST00000349379 PM20D1Q6GTS8 502 aa23.27■■□□□ 1.32
SNX3-202ENST00000349379 APTXQ7Z2E3 356 aaKnown RBP23.27■■□□□ 1.32
SNX3-202ENST00000349379 PJA1Q8NG27 643 aa23.27■■□□□ 1.32
SNX3-202ENST00000349379 CSGALNACT1Q8TDX6 532 aa23.27■■□□□ 1.32
SNX3-202ENST00000349379 MSANTD3Q96H12 275 aa23.27■■□□□ 1.32
SNX3-202ENST00000349379 OSBPL6Q9BZF3 934 aa23.27■■□□□ 1.32
SNX3-202ENST00000349379 FOXQ1Q9C009 403 aa23.27■■□□□ 1.32
SNX3-202ENST00000349379 NAT10Q9H0A0 1025 aaKnown RBP23.27■■□□□ 1.32
SNX3-202ENST00000349379 KCNH6Q9H252 994 aa23.27■■□□□ 1.32
SNX3-202ENST00000349379 VPS16Q9H269 839 aa23.27■■□□□ 1.32
SNX3-202ENST00000349379 LTB4R2Q9NPC1 389 aa23.27■■□□□ 1.32
SNX3-202ENST00000349379 GTSE1Q9NYZ3 720 aa23.27■■□□□ 1.32
SNX3-202ENST00000349379 DNAJC12Q9UKB3 198 aa23.27■■□□□ 1.32
SNX3-202ENST00000349379 PIAS3Q9Y6X2 628 aa23.27■■□□□ 1.32
SNX3-202ENST00000349379 TLR5O60602 858 aa23.26■■□□□ 1.31
SNX3-202ENST00000349379 NUBP1P53384 320 aa23.26■■□□□ 1.31
SNX3-202ENST00000349379 COPB1P53618 953 aaKnown RBP23.26■■□□□ 1.31
SNX3-202ENST00000349379 TNK2Q07912 1038 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms