RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 ZCCHC9Q8N567 271 aaKnown RBP18.04■□□□□ 0.48
SPAST-202ENST00000345662 CBWD1Q9BRT8 395 aa18.04■□□□□ 0.48
SPAST-202ENST00000345662 LRRC40Q9H9A6 602 aa18.04■□□□□ 0.48
SPAST-202ENST00000345662 C17orf75Q9HAS0 396 aa18.04■□□□□ 0.48
SPAST-202ENST00000345662 E9PCH4 1651 aa18.04■□□□□ 0.48
SPAST-202ENST00000345662 OVOS2A0A0J9YW53 1432 aa18.04■□□□□ 0.48
SPAST-202ENST00000345662 OVOS2Q6IE36 1432 aa18.04■□□□□ 0.48
SPAST-202ENST00000345662 PHGDHO43175 533 aaKnown RBP18.04■□□□□ 0.48
SPAST-202ENST00000345662 ACADSBP45954 432 aa18.04■□□□□ 0.48
SPAST-202ENST00000345662 LRRC8DQ7L1W4 858 aa18.04■□□□□ 0.48
SPAST-202ENST00000345662 ZNF518BQ9C0D4 1074 aa18.04■□□□□ 0.48
SPAST-202ENST00000345662 NCKIPSDQ9NZQ3 722 aa18.04■□□□□ 0.48
SPAST-202ENST00000345662 TRIM25Q14258 630 aaKnown RBP18.04■□□□□ 0.48
SPAST-202ENST00000345662 MYBPC2Q14324 1141 aa18.04■□□□□ 0.48
SPAST-202ENST00000345662 ACCSLQ4AC99 568 aa18.04■□□□□ 0.48
SPAST-202ENST00000345662 N4BP2L1Q5TBK1 243 aaPredicted RBP18.04■□□□□ 0.48
SPAST-202ENST00000345662 TRIM63Q969Q1 353 aa18.04■□□□□ 0.48
SPAST-202ENST00000345662 IMPAD1Q9NX62 359 aa18.04■□□□□ 0.48
SPAST-202ENST00000345662 CLIC5Q9NZA1 410 aa18.04■□□□□ 0.48
SPAST-202ENST00000345662 IL18RAPO95256 599 aa18.03■□□□□ 0.48
SPAST-202ENST00000345662 SF3B3Q15393 1217 aaKnown RBP18.03■□□□□ 0.48
SPAST-202ENST00000345662 PARP6Q2NL67 630 aa18.03■□□□□ 0.48
SPAST-202ENST00000345662 COQ7Q99807 217 aa18.03■□□□□ 0.48
SPAST-202ENST00000345662 FAM49BQ9NUQ9 324 aa18.03■□□□□ 0.48
SPAST-202ENST00000345662 TRIM24O15164 1050 aa18.03■□□□□ 0.48
SPAST-202ENST00000345662 MUTP22033 750 aa18.03■□□□□ 0.48
SPAST-202ENST00000345662 NFYCQ13952 458 aa18.03■□□□□ 0.48
SPAST-202ENST00000345662 INAQ16352 499 aa18.03■□□□□ 0.48
SPAST-202ENST00000345662 RSBN1Q5VWQ0 802 aaPredicted RBP18.03■□□□□ 0.48
SPAST-202ENST00000345662 KIAA1841Q6NSI8 718 aa18.03■□□□□ 0.48
SPAST-202ENST00000345662 DRG2P55039 364 aaKnown RBP18.03■□□□□ 0.48
SPAST-202ENST00000345662 NEDD8Q15843 81 aa18.03■□□□□ 0.48
SPAST-202ENST00000345662 QPCTQ16769 361 aa18.03■□□□□ 0.48
SPAST-202ENST00000345662 AGKQ53H12 422 aa18.03■□□□□ 0.48
SPAST-202ENST00000345662 ZNF720Q7Z2F6 126 aa18.03■□□□□ 0.48
SPAST-202ENST00000345662 UNC45BQ8IWX7 931 aa18.03■□□□□ 0.48
SPAST-202ENST00000345662 MTERF3Q96E29 417 aa18.03■□□□□ 0.48
SPAST-202ENST00000345662 SLC8A2Q9UPR5 921 aa18.03■□□□□ 0.48
SPAST-202ENST00000345662 SORCS3Q9UPU3 1222 aa18.03■□□□□ 0.48
SPAST-202ENST00000345662 NRXN1Q9ULB1 1477 aa18.03■□□□□ 0.48
SPAST-202ENST00000345662 GLRBP48167 497 aa18.03■□□□□ 0.48
SPAST-202ENST00000345662 ITGA9Q13797 1035 aa18.03■□□□□ 0.48
SPAST-202ENST00000345662 PDK3Q15120 406 aa18.03■□□□□ 0.48
SPAST-202ENST00000345662 LACTB2Q53H82 288 aaPredicted RBP18.03■□□□□ 0.48
SPAST-202ENST00000345662 BBS7Q8IWZ6 715 aa18.03■□□□□ 0.48
SPAST-202ENST00000345662 RABGEF1Q9UJ41 708 aa18.03■□□□□ 0.48
SPAST-202ENST00000345662 FBXO33Q7Z6M2 555 aa18.02■□□□□ 0.48
SPAST-202ENST00000345662 STRA8Q7Z7C7 330 aa18.02■□□□□ 0.48
SPAST-202ENST00000345662 MASTLQ96GX5 879 aa18.02■□□□□ 0.48
SPAST-202ENST00000345662 UBDO15205 165 aa18.02■□□□□ 0.48
SPAST-202ENST00000345662 AVPR1AP37288 418 aa18.02■□□□□ 0.48
SPAST-202ENST00000345662 RAD23AP54725 363 aa18.02■□□□□ 0.48
SPAST-202ENST00000345662 PLEKHM3Q6ZWE6 761 aa18.02■□□□□ 0.48
SPAST-202ENST00000345662 MCOLN2Q8IZK6 566 aa18.02■□□□□ 0.48
SPAST-202ENST00000345662 DLG3Q92796 817 aa18.02■□□□□ 0.48
SPAST-202ENST00000345662 ASIC4Q96FT7 647 aa18.02■□□□□ 0.48
SPAST-202ENST00000345662 KCTD10Q9H3F6 313 aa18.02■□□□□ 0.48
SPAST-202ENST00000345662 ATXN10Q9UBB4 475 aa18.02■□□□□ 0.48
SPAST-202ENST00000345662 C5orf58C9J3I9 102 aa18.02■□□□□ 0.48
SPAST-202ENST00000345662 PCSK7Q16549 785 aa18.02■□□□□ 0.48
SPAST-202ENST00000345662 DHFR2Q86XF0 187 aa18.02■□□□□ 0.48
SPAST-202ENST00000345662 TMEM139Q8IV31 216 aa18.02■□□□□ 0.48
SPAST-202ENST00000345662 ETNPPLQ8TBG4 499 aa18.02■□□□□ 0.48
SPAST-202ENST00000345662 TMC2Q8TDI7 906 aa18.02■□□□□ 0.48
SPAST-202ENST00000345662 SLC35C1Q96A29 364 aa18.02■□□□□ 0.48
SPAST-202ENST00000345662 OTULINQ96BN8 352 aa18.02■□□□□ 0.48
SPAST-202ENST00000345662 CDRT15Q96T59 188 aa18.02■□□□□ 0.48
SPAST-202ENST00000345662 COPS7BQ9H9Q2 264 aaPredicted RBP18.02■□□□□ 0.48
SPAST-202ENST00000345662 PCYOX1Q9UHG3 505 aa18.02■□□□□ 0.48
SPAST-202ENST00000345662 CAMTA2O94983 1202 aa18.02■□□□□ 0.47
SPAST-202ENST00000345662 MAP3K6O95382 1288 aa18.02■□□□□ 0.47
SPAST-202ENST00000345662 ANPEPP15144 967 aa18.02■□□□□ 0.47
SPAST-202ENST00000345662 ATP6V1B2P21281 511 aa18.02■□□□□ 0.47
SPAST-202ENST00000345662 TTKP33981 857 aa18.02■□□□□ 0.47
SPAST-202ENST00000345662 AFF2P51816 1311 aa18.02■□□□□ 0.47
SPAST-202ENST00000345662 PRKCEQ02156 737 aa18.02■□□□□ 0.47
SPAST-202ENST00000345662 PRKAA1Q13131 559 aa18.02■□□□□ 0.47
SPAST-202ENST00000345662 LENG1Q96BZ8 264 aaPredicted RBP18.02■□□□□ 0.47
SPAST-202ENST00000345662 RNPEPQ9H4A4 650 aa18.02■□□□□ 0.47
SPAST-202ENST00000345662 RRN3Q9NYV6 651 aa18.02■□□□□ 0.47
SPAST-202ENST00000345662 NR5A2O00482 541 aa18.01■□□□□ 0.47
SPAST-202ENST00000345662 PGM3O95394 542 aa18.01■□□□□ 0.47
SPAST-202ENST00000345662 MMP13P45452 471 aa18.01■□□□□ 0.47
SPAST-202ENST00000345662 ALDH1A3P47895 512 aa18.01■□□□□ 0.47
SPAST-202ENST00000345662 DGKDQ16760 1214 aa18.01■□□□□ 0.47
SPAST-202ENST00000345662 SPATA33Q96N06 139 aa18.01■□□□□ 0.47
SPAST-202ENST00000345662 NR1H2P55055 460 aa18.01■□□□□ 0.47
SPAST-202ENST00000345662 PDK4Q16654 411 aa18.01■□□□□ 0.47
SPAST-202ENST00000345662 ZNF513Q8N8E2 541 aaPredicted RBP18.01■□□□□ 0.47
SPAST-202ENST00000345662 APPL2Q8NEU8 664 aa18.01■□□□□ 0.47
SPAST-202ENST00000345662 TAS1R2Q8TE23 839 aa18.01■□□□□ 0.47
SPAST-202ENST00000345662 ZNF333Q96JL9 665 aa18.01■□□□□ 0.47
SPAST-202ENST00000345662 CNPY3Q9BT09 278 aa18.01■□□□□ 0.47
SPAST-202ENST00000345662 NOL6Q9H6R4 1146 aaKnown RBP18.01■□□□□ 0.47
SPAST-202ENST00000345662 KCNH7Q9NS40 1196 aa18.01■□□□□ 0.47
SPAST-202ENST00000345662 GOLGA8TH3BQL2 631 aa18.01■□□□□ 0.47
SPAST-202ENST00000345662 SOAT2O75908 522 aa18.01■□□□□ 0.47
SPAST-202ENST00000345662 HIST1H2AGP0C0S8 130 aaPredicted RBP18.01■□□□□ 0.47
SPAST-202ENST00000345662 DDX5P17844 614 aaKnown RBP18.01■□□□□ 0.47
SPAST-202ENST00000345662 HIST1H2ADP20671 130 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms