RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 PASD1Q8IV76 773 aa21.92■■□□□ 1.1
SMARCB1-202ENST00000344921 SIX6OS1Q8N1H7 587 aa21.92■■□□□ 1.1
SMARCB1-202ENST00000344921 CYP2S1Q96SQ9 504 aa21.92■■□□□ 1.1
SMARCB1-202ENST00000344921 SCML2Q9UQR0 700 aa21.92■■□□□ 1.1
SMARCB1-202ENST00000344921 MYO10Q9HD67 2058 aa21.92■■□□□ 1.1
SMARCB1-202ENST00000344921 MYO16Q9Y6X6 1858 aa21.92■■□□□ 1.1
SMARCB1-202ENST00000344921 TRAV19A0A0A6YYK7 116 aa21.92■■□□□ 1.1
SMARCB1-202ENST00000344921 FAM92AA1XBS5 289 aa21.92■■□□□ 1.1
SMARCB1-202ENST00000344921 ANHXE9PGG2 379 aa21.92■■□□□ 1.1
SMARCB1-202ENST00000344921 PIK3R2O00459 728 aa21.92■■□□□ 1.1
SMARCB1-202ENST00000344921 CKMP06732 381 aa21.92■■□□□ 1.1
SMARCB1-202ENST00000344921 USP17L7P0C7H9 530 aa21.92■■□□□ 1.1
SMARCB1-202ENST00000344921 GPD2P43304 727 aa21.92■■□□□ 1.1
SMARCB1-202ENST00000344921 ADIGQ0VDE8 80 aa21.92■■□□□ 1.1
SMARCB1-202ENST00000344921 RAB41Q5JT25 222 aa21.92■■□□□ 1.1
SMARCB1-202ENST00000344921 TAF3Q5VWG9 929 aa21.92■■□□□ 1.1
SMARCB1-202ENST00000344921 TANGO2Q6ICL3 276 aa21.92■■□□□ 1.1
SMARCB1-202ENST00000344921 KCTD13Q8WZ19 329 aa21.92■■□□□ 1.1
SMARCB1-202ENST00000344921 CEP83Q9Y592 693 aa21.92■■□□□ 1.1
SMARCB1-202ENST00000344921 SOBPA7XYQ1 873 aa21.91■■□□□ 1.1
SMARCB1-202ENST00000344921 HDCP19113 662 aa21.91■■□□□ 1.1
SMARCB1-202ENST00000344921 VIPR2P41587 438 aa21.91■■□□□ 1.1
SMARCB1-202ENST00000344921 MEA1Q16626 185 aa21.91■■□□□ 1.1
SMARCB1-202ENST00000344921 ARL14EPQ8N8R7 260 aaPredicted RBP21.91■■□□□ 1.1
SMARCB1-202ENST00000344921 TTC16Q8NEE8 873 aa21.91■■□□□ 1.1
SMARCB1-202ENST00000344921 RPP25Q9BUL9 199 aaKnown RBP21.91■■□□□ 1.1
SMARCB1-202ENST00000344921 SMG9Q9H0W8 520 aaKnown RBP21.91■■□□□ 1.1
SMARCB1-202ENST00000344921 RBSNQ9H1K0 784 aa21.91■■□□□ 1.1
SMARCB1-202ENST00000344921 PCDHGC3Q9UN70 934 aa21.91■■□□□ 1.1
SMARCB1-202ENST00000344921 SORCS3Q9UPU3 1222 aa21.91■■□□□ 1.1
SMARCB1-202ENST00000344921 USP3Q9Y6I4 520 aa21.91■■□□□ 1.1
SMARCB1-202ENST00000344921 ANAPC1Q9H1A4 1944 aa21.9■■□□□ 1.1
SMARCB1-202ENST00000344921 ZBED1O96006 694 aa21.9■■□□□ 1.1
SMARCB1-202ENST00000344921 TDGQ13569 410 aa21.9■■□□□ 1.1
SMARCB1-202ENST00000344921 CCDC186Q7Z3E2 898 aa21.9■■□□□ 1.1
SMARCB1-202ENST00000344921 ELSPBP1Q96BH3 223 aa21.9■■□□□ 1.1
SMARCB1-202ENST00000344921 HSFY1Q96LI6 401 aa21.9■■□□□ 1.1
SMARCB1-202ENST00000344921 NUP58Q9BVL2 599 aa21.9■■□□□ 1.1
SMARCB1-202ENST00000344921 ULBP1Q9BZM6 244 aa21.9■■□□□ 1.1
SMARCB1-202ENST00000344921 NACA2Q9H009 215 aa21.9■■□□□ 1.1
SMARCB1-202ENST00000344921 NAGPAQ9UK23 515 aa21.9■■□□□ 1.1
SMARCB1-202ENST00000344921 TNFRSF10AO00220 468 aa21.89■■□□□ 1.1
SMARCB1-202ENST00000344921 ECI2O75521 394 aa21.89■■□□□ 1.1
SMARCB1-202ENST00000344921 HECTD3Q5T447 861 aa21.89■■□□□ 1.1
SMARCB1-202ENST00000344921 NOP9Q86U38 636 aaKnown RBP21.89■■□□□ 1.1
SMARCB1-202ENST00000344921 SLC44A3Q8N4M1 653 aa21.89■■□□□ 1.1
SMARCB1-202ENST00000344921 E2F7Q96AV8 911 aa21.89■■□□□ 1.1
SMARCB1-202ENST00000344921 NOX5Q96PH1 765 aa21.89■■□□□ 1.1
SMARCB1-202ENST00000344921 SLC22A12Q96S37 553 aa21.89■■□□□ 1.1
SMARCB1-202ENST00000344921 NCANO14594 1321 aa21.89■■□□□ 1.1
SMARCB1-202ENST00000344921 MUC3AQ02505 3323 aa21.89■■□□□ 1.09
SMARCB1-202ENST00000344921 A0A1W2PQH9 124 aa21.89■■□□□ 1.09
SMARCB1-202ENST00000344921 CCDC172P0C7W6 258 aa21.89■■□□□ 1.09
SMARCB1-202ENST00000344921 FCARP24071 287 aa21.89■■□□□ 1.09
SMARCB1-202ENST00000344921 GAS2L3Q86XJ1 694 aa21.89■■□□□ 1.09
SMARCB1-202ENST00000344921 EPS8L1Q8TE68 723 aa21.89■■□□□ 1.09
SMARCB1-202ENST00000344921 MIS12Q9H081 205 aa21.89■■□□□ 1.09
SMARCB1-202ENST00000344921 LHX5Q9H2C1 402 aa21.89■■□□□ 1.09
SMARCB1-202ENST00000344921 TRPV4Q9HBA0 871 aa21.89■■□□□ 1.09
SMARCB1-202ENST00000344921 TDP1Q9NUW8 608 aa21.89■■□□□ 1.09
SMARCB1-202ENST00000344921 HEPACAM2A8MVW5 462 aa21.88■■□□□ 1.09
SMARCB1-202ENST00000344921 PRAMEF12O95522 483 aa21.88■■□□□ 1.09
SMARCB1-202ENST00000344921 ZDHHC11BP0C7U3 371 aa21.88■■□□□ 1.09
SMARCB1-202ENST00000344921 PBX1P40424 430 aa21.88■■□□□ 1.09
SMARCB1-202ENST00000344921 ACADSBP45954 432 aa21.88■■□□□ 1.09
SMARCB1-202ENST00000344921 PGFP49763 221 aa21.88■■□□□ 1.09
SMARCB1-202ENST00000344921 PSEN1P49768 467 aa21.88■■□□□ 1.09
SMARCB1-202ENST00000344921 SNX30Q5VWJ9 437 aa21.88■■□□□ 1.09
SMARCB1-202ENST00000344921 ZNF677Q86XU0 584 aa21.88■■□□□ 1.09
SMARCB1-202ENST00000344921 FMNL3Q8IVF7 1028 aa21.88■■□□□ 1.09
SMARCB1-202ENST00000344921 ARHGAP18Q8N392 663 aa21.88■■□□□ 1.09
SMARCB1-202ENST00000344921 CELF5Q8N6W0 485 aaKnown RBP21.88■■□□□ 1.09
SMARCB1-202ENST00000344921 C1orf131Q8NDD1 294 aaKnown RBP21.88■■□□□ 1.09
SMARCB1-202ENST00000344921 CPLX3Q8WVH0 158 aa21.88■■□□□ 1.09
SMARCB1-202ENST00000344921 NDRG1Q92597 394 aaKnown RBP21.88■■□□□ 1.09
SMARCB1-202ENST00000344921 PLA2G2FQ9BZM2 168 aa21.88■■□□□ 1.09
SMARCB1-202ENST00000344921 CCSER2Q9H7U1 834 aa21.88■■□□□ 1.09
SMARCB1-202ENST00000344921 CNGB3Q9NQW8 809 aa21.88■■□□□ 1.09
SMARCB1-202ENST00000344921 MYO6Q9UM54 1294 aa21.88■■□□□ 1.09
SMARCB1-202ENST00000344921 NUP210Q8TEM1 1887 aaPredicted RBP21.87■■□□□ 1.09
SMARCB1-202ENST00000344921 LRRC53A6NM62 1247 aa21.87■■□□□ 1.09
SMARCB1-202ENST00000344921 TLR5O60602 858 aa21.87■■□□□ 1.09
SMARCB1-202ENST00000344921 OAS1P00973 400 aaKnown RBP21.87■■□□□ 1.09
SMARCB1-202ENST00000344921 MMEP08473 750 aa21.87■■□□□ 1.09
SMARCB1-202ENST00000344921 FERP16591 822 aa21.87■■□□□ 1.09
SMARCB1-202ENST00000344921 PFKLP17858 780 aa21.87■■□□□ 1.09
SMARCB1-202ENST00000344921 WEE1P30291 646 aa21.87■■□□□ 1.09
SMARCB1-202ENST00000344921 PM20D1Q6GTS8 502 aa21.87■■□□□ 1.09
SMARCB1-202ENST00000344921 YAF2Q8IY57 180 aa21.87■■□□□ 1.09
SMARCB1-202ENST00000344921 STK32AQ8WU08 396 aa21.87■■□□□ 1.09
SMARCB1-202ENST00000344921 BAP1Q92560 729 aa21.87■■□□□ 1.09
SMARCB1-202ENST00000344921 USP13Q92995 863 aaPredicted RBP21.87■■□□□ 1.09
SMARCB1-202ENST00000344921 TRIM5Q9C035 493 aa21.87■■□□□ 1.09
SMARCB1-202ENST00000344921 RNF38Q9H0F5 515 aa21.87■■□□□ 1.09
SMARCB1-202ENST00000344921 NMUR1Q9HB89 426 aa21.87■■□□□ 1.09
SMARCB1-202ENST00000344921 CYTH4Q9UIA0 394 aa21.87■■□□□ 1.09
SMARCB1-202ENST00000344921 CCL26Q9Y258 94 aa21.87■■□□□ 1.09
SMARCB1-202ENST00000344921 DCXO43602 365 aa21.86■■□□□ 1.09
SMARCB1-202ENST00000344921 NCOR1O75376 2440 aa21.86■■□□□ 1.09
SMARCB1-202ENST00000344921 MBL2P11226 248 aaPredicted RBP21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms